Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold44G16790 Striga asiatica HOM05D006590 ORTHO05D008427 0.0e+00 1255.4 648 100.0
Migut.F00225 Erythranthe guttata HOM05D006590 ORTHO05D008427 2.9e-269 931.8 671 70.0
SalBow4G1653 Salvia bowleyana HOM05D006590 ORTHO05D008427 1.5e-265 919.5 675 69.5
Oeu041046.1 Olea europaea HOM05D006590 ORTHO05D008427 1.2e-262 909.8 678 68.6
CSS0003993 Camellia sinensis var. sinensis HOM05D006590 ORTHO05D008427 1.3e-240 836.6 625 67.0
Actinidia08640 Actinidia chinensis HOM05D006590 ORTHO05D008427 3.8e-237 825.1 663 65.0
Dinv35324 Davidia involucrata HOM05D006590 ORTHO05D008427 4.6e-235 818.1 575 70.3
PGSC0003DMG400009120 Solanum tuberosum HOM05D006590 ORTHO05D008427 3.3e-233 812.0 671 61.4
vmacro06540 Vaccinium macrocarpon HOM05D006590 ORTHO05D008427 5.7e-233 811.2 620 65.5
Rhsim03G0207800 Rhododendron simsii HOM05D006590 ORTHO05D008427 7.4e-233 810.8 617 65.6
Thecc.03G196200 Theobroma cacao HOM05D006590 ORTHO05D008427 3.7e-232 808.5 586 67.4
Sopen03g023190 Solanum pennellii HOM05D006590 ORTHO05D008427 6.3e-232 807.7 671 61.1
GSVIVG01038710001 Vitis vinifera HOM05D006590 ORTHO05D008427 1.1e-231 807.0 662 63.7
Ciclev10004491m.g Citrus clementina HOM05D006590 ORTHO05D008427 1.2e-230 803.5 647 62.8
Duzib205G0486 Durio zibethinus HOM05D006590 ORTHO05D008427 1.2e-230 803.5 591 66.8
TWI14G0328 Tripterygium wilfordii HOM05D006590 ORTHO05D008427 1.2e-230 803.5 625 65.3
Haze_00189 Corylus avellana HOM05D006590 ORTHO05D008427 4.5e-230 801.6 650 63.8
CAN.G108.67 Capsicum annuum HOM05D006590 ORTHO05D008427 7.6e-230 800.8 622 64.8
Nitab4.5_0000714g0140 Nicotiana tabacum HOM05D006590 ORTHO05D008427 1.3e-229 800.0 600 66.2
Hma1.2p1_0404F.1_g145500 Hydrangea macrophylla HOM05D006590 ORTHO05D008427 1.7e-229 799.7 587 66.6
Lalb_Chr08g0240321 Lupinus albus HOM05D006590 ORTHO05D008427 8.5e-229 797.3 632 63.6
Atru.chr1.163 Acer truncatum HOM05D006590 ORTHO05D008427 7.2e-228 794.3 625 63.8
Ca_16698_v3 Cicer arietinum L. HOM05D006590 ORTHO05D008427 7.2e-228 794.3 632 62.3
arahy.Tifrunner.gnm1.ann1.X012TI Arachis hypogaea HOM05D006590 ORTHO05D008427 2.1e-227 792.7 629 63.3
Potri.015G017100 Populus trichocarpa HOM05D006590 ORTHO05D008427 2.1e-227 792.7 587 67.0
COL.COLO4_11262 Corchorus olitorius HOM05D006590 ORTHO05D008427 4.6e-227 791.6 614 64.2
Cfa016251 Carpinus fangiana HOM05D006590 ORTHO05D008427 7.9e-227 790.8 649 62.9
arahy.Tifrunner.gnm1.ann1.ICGL65 Arachis hypogaea HOM05D006590 ORTHO05D008427 2.3e-226 789.3 643 61.9
Sc13g0009780 Simmondsia chinensis HOM05D006590 ORTHO05D008427 3.0e-226 788.9 629 63.6
Medtr3g091290 Medicago truncatula HOM05D006590 ORTHO05D008427 2.5e-225 785.8 644 61.3
CiPaw.05G251800 Carya illinoinensis HOM05D006590 ORTHO05D008427 4.3e-225 785.0 589 65.5
Lj1g0007393 Lotus japonicus HOM05D006590 ORTHO05D008427 9.7e-225 783.9 636 62.1
Prupe.2G311400 Prunus persica HOM05D006590 ORTHO05D008427 1.3e-224 783.5 587 65.8
Cc02_g01670 Coffea canephora HOM05D006590 ORTHO05D008427 4.8e-224 781.6 581 67.0
Glyma.06G127700 Glycine max HOM05D006590 ORTHO05D008427 4.8e-224 781.6 630 62.9
Phvul.009G053500 Phaseolus vulgaris HOM05D006590 ORTHO05D008427 1.8e-223 779.6 593 64.2
Psat5g078080 Pisum sativum HOM05D006590 ORTHO05D008427 2.4e-223 779.2 592 63.9
QL09p009505 Quercus lobata HOM05D006590 ORTHO05D008427 6.9e-223 777.7 589 65.2
Glyma.04G236600 Glycine max HOM05D006590 ORTHO05D008427 1.2e-222 776.9 639 62.1
Gohir.D12G251400 Gossypium hirsutum HOM05D006590 ORTHO05D008427 2.6e-222 775.8 628 61.6
Gohir.A12G250600 Gossypium hirsutum HOM05D006590 ORTHO05D008427 5.9e-222 774.6 589 64.9
Manes.06G159700 Manihot esculenta HOM05D006590 ORTHO05D008427 7.7e-222 774.2 587 64.2
TPR.G17286 Trifolium pratense HOM05D006590 ORTHO05D008427 7.7e-222 774.2 594 63.3
CANSAT21G0035 Cannabis sativa HOM05D006590 ORTHO05D008427 1.0e-221 773.9 586 63.5
FAN10G1373 Fragaria x ananassa HOM05D006590 ORTHO05D008427 1.7e-221 773.1 588 64.8
FAN10G2802 Fragaria x ananassa HOM05D006590 ORTHO05D008427 3.8e-221 771.9 588 64.6
FvH4_7g31750 Fragaria vesca HOM05D006590 ORTHO05D008427 6.5e-221 771.2 588 65.0
FAN06G3161 Fragaria x ananassa HOM05D006590 ORTHO05D008427 6.5e-221 771.2 588 65.0
FAN06G3878 Fragaria x ananassa HOM05D006590 ORTHO05D008427 6.5e-221 771.2 588 65.0
Eucgr.A01466 Eucalyptus grandis HOM05D006590 ORTHO05D008427 8.5e-221 770.8 624 61.5
PGR042G1173 Punica granatum HOM05D006590 ORTHO05D008427 1.4e-220 770.0 591 65.8
Gorai.008G269500 Gossypium raimondii HOM05D006590 ORTHO05D008427 1.9e-220 769.6 607 62.9
MD01G1219800 Malus domestica HOM05D006590 ORTHO05D008427 2.5e-220 769.2 591 64.3
VMungo1309G0677 Vigna mungo HOM05D006590 ORTHO05D008427 2.5e-220 769.2 593 63.9
HanXRQChr09g0250931 Helianthus annuus HOM05D006590 ORTHO05D008427 5.5e-220 768.1 588 63.9
FAN03G2401 Fragaria x ananassa HOM05D006590 ORTHO05D008427 2.7e-219 765.8 588 64.3
ECA232G3273 Erigeron canadensis HOM05D006590 ORTHO05D008427 2.3e-218 762.7 588 63.8
RcHm_v2.0_Chr1g0380971 Rosa chinensis HOM05D006590 ORTHO05D008427 2.3e-218 762.7 661 60.2
THA.LOC104800297 Tarenaya hassleriana HOM05D006590 ORTHO05D008427 3.3e-217 758.8 625 61.1
TAR375G1022 Trochodendron aralioides HOM05D006590 ORTHO05D008427 7.4e-217 757.7 612 63.4
Nn1g01869 Nelumbo nucifera HOM05D006590 ORTHO05D008427 9.7e-217 757.3 589 65.2
MELO3C008489.2 Cucumis melo HOM05D006590 ORTHO05D008427 2.4e-215 752.7 589 63.2
FAN01G1498 Fragaria x ananassa HOM05D006590 ORTHO05D008427 2.6e-214 749.2 599 62.9
CsaV3_3G027870 Cucumis sativus L. HOM05D006590 ORTHO05D008427 3.4e-214 748.8 589 62.6
Sp6g15580 Schrenkiella parvula HOM05D006590 ORTHO05D008427 4.5e-214 748.4 628 60.8
AUR62006110 Chenopodium quinoa HOM05D006590 ORTHO05D008427 2.9e-213 745.7 589 63.3
Thhalv10012882m.g Eutrema salsugineum HOM05D006590 ORTHO05D008427 8.5e-213 744.2 629 60.3
MBI07_g07100_MAGBIO Magnolia biondii HOM05D006590 ORTHO05D008427 8.5e-213 744.2 660 58.6
PSO170G2823 Papaver somniferum HOM05D006590 ORTHO05D008427 1.9e-212 743.0 588 61.6
PSO063G2913 Papaver somniferum HOM05D006590 ORTHO05D008427 4.2e-212 741.9 588 61.6
Peaxi162Scf00550g00546 Petunia axillaris HOM05D006590 ORTHO05D008427 4.2e-212 741.9 623 60.8
Sed0010238 Sechium edule HOM05D006590 ORTHO05D008427 1.6e-211 740.0 619 60.1
CARHR266570 Cardamine hirsuta HOM05D006590 ORTHO05D008427 3.6e-211 738.8 591 62.8
AUR62019378 Chenopodium quinoa HOM05D006590 ORTHO05D008427 4.7e-211 738.4 681 56.8
BraA10t43179Z Brassica rapa HOM05D006590 ORTHO05D008427 7.9e-211 737.6 656 58.2
BolC9t57211H Brassica oleracea HOM05D006590 ORTHO05D008427 1.4e-210 736.9 662 58.0
Aqoxy5G04233 Aquilegia oxysepala HOM05D006590 ORTHO05D008427 3.0e-210 735.7 647 57.5
Carub.0008s1361 Capsella rubella HOM05D006590 ORTHO05D008427 2.0e-209 733.0 651 57.9
AL8G28150 Arabidopsis lyrata HOM05D006590 ORTHO05D008427 2.6e-209 732.6 590 62.4
Nitab4.5_0007081g0010 Nicotiana tabacum HOM05D006590 ORTHO05D008427 2.2e-208 729.6 600 62.0
Aa31LG3G9610 Aethionema arabicum HOM05D006590 ORTHO05D008427 5.5e-204 714.9 588 61.6
DCAR_014541 Daucus carota HOM05D006590 ORTHO05D008427 2.6e-201 706.1 590 60.8
A10p10910 Brassica napus HOM05D001108 ORTHO05D001619 9.7e-201 704.1 633 57.7
Os01g0655500 Oryza sativa ssp. japonica HOM05D006590 ORTHO05D008427 1.3e-200 703.7 588 59.2
C09p43300 Brassica napus HOM05D001108 ORTHO05D001619 2.8e-200 702.6 639 57.1
Potri.015G016801 Populus trichocarpa HOM05D006590 ORTHO05D008427 1.1e-196 690.6 589 62.0
CSS0014515 Camellia sinensis var. sinensis HOM05D006590 ORTHO05D008427 1.8e-194 683.3 492 69.7
HPP92_006416 Vanilla planifolia HOM05D006590 ORTHO05D008427 1.5e-193 680.2 590 57.5
Lsat_1_v5_gn_5_75160 Lactuca sativa HOM05D006590 ORTHO05D008427 2.0e-193 679.9 605 59.2
EL10Ac3g05300 Beta vulgaris HOM05D006590 ORTHO05D008427 7.0e-191 671.4 589 58.7
BcaB08g35710 Brassica carinata HOM05D006590 ORTHO05D008427 1.7e-189 666.8 662 54.2
ATR0602G100 Amborella trichopoda HOM05D006590 ORTHO05D008427 1.5e-188 663.7 649 54.5
Solyc03g083420.4 Solanum lycopersicum HOM05D006590 ORTHO05D008427 6.3e-184 648.3 535 61.9
unitig_899.g15485 Utricularia gibba HOM05D006590 ORTHO05D008427 2.3e-181 639.8 623 54.9
SEGI_37244 Sequoiadendron giganteum HOM05D006590 ORTHO05D008427 8.6e-181 637.9 601 54.4
Cpa.g.sc3.70 Carica papaya HOM05D006590 ORTHO05D008427 3.7e-176 622.5 559 57.8
Hma1.2p1_0404F.1_g145510 Hydrangea macrophylla HOM05D006590 ORTHO05D008427 1.4e-175 620.5 463 66.5
Mapoly0022s0163 Marchantia polymorpha HOM05D006590 ORTHO05D008427 1.2e-150 537.7 592 48.1
Lj1C1015G5 Lonicera japonica HOM05D006590 ORTHO05D008427 5.2e-146 522.3 632 47.5
AT5G53450 Arabidopsis thaliana HOM05D006590 ORTHO05D008427 1.1e-143 514.6 377 67.1
SMO172G0068 Selaginella moellendorffii HOM05D006590 ORTHO05D008427 7.1e-143 511.9 596 47.7
SalBow4G1387 Salvia bowleyana HOM05D006590 ORTHO05D008427 3.9e-141 506.1 360 70.3
ClCG05G008870 Citrullus lanatus HOM05D006590 ORTHO05D008427 1.1e-135 488.0 359 67.1
Zm00001eb158040 Zea mays HOM05D006590 ORTHO05D008427 2.4e-130 470.3 360 63.3
Sabra15G0013100 Salix brachista HOM05D006590 ORTHO05D008427 5.0e-96 356.3 228 76.8
CBR_g39728 Chara braunii HOM05D006590 ORTHO05D008427 1.7e-80 304.7 625 32.5
Potri.015G016500 Populus trichocarpa HOM05D006590 ORTHO05D008427 3.1e-66 257.3 233 54.5
Actinidia33527 Actinidia chinensis HOM05D006590 ORTHO05D008427 5.2e-61 240.0 316 46.2
Potri.015G016600 Populus trichocarpa HOM05D006590 ORTHO05D008427 1.3e-56 225.3 159 69.2
Potri.015G016300 Populus trichocarpa HOM05D006590 ORTHO05D008427 2.3e-45 188.0 107 81.3
Potri.015G016375 Populus trichocarpa HOM05D006590 ORTHO05D008427 1.9e-42 178.3 144 64.6
BcaC04g19592 Brassica carinata HOM05D006590 ORTHO05D008427 1.1e-39 169.1 122 67.2
Sabra15G0012800 Salix brachista HOM05D006590 ORTHO05D008427 5.6e-39 166.8 151 53.6
Hund04856 Selenicereus undatus HOM05D006590 ORTHO05D008427 2.4e-29 134.8 100 63.0
Actinidia34212 Actinidia chinensis HOM05D006590 ORTHO05D008427 7.1e-26 123.2 71 77.5
COL.COLO4_02893 Corchorus olitorius HOM05D006590 ORTHO05D008427 3.0e-24 117.9 61 90.2
CDE10G1176 Ceratophyllum demersum HOM05D006590 ORTHO05D008427 9.3e-18 96.3 58 74.1
Hma1.2p1_0404F.1_g145520 Hydrangea macrophylla HOM05D006590 ORTHO05D008427 3.9e-16 90.9 61 68.9
Aqoxy2G01300 Aquilegia oxysepala HOM05D006590 ORTHO05D008427 1.0e-08 66.2 47 59.6
CAN.G37.10 Capsicum annuum HOM05D006590 ORTHO05D008427 5.6e-07 60.5 56 51.8
CDE09G1163 Ceratophyllum demersum HOM05D002406 ORTHO05D007964 5.6e-07 60.5 288 20.8
unitig_52.g17148 Utricularia gibba HOM05D002406 ORTHO05D007964 9.6e-07 59.7 346 22.0
CSS0033832 Camellia sinensis var. sinensis HOM05D002406 ORTHO05D007964 1.6e-06 58.9 346 21.4
Sabra10G0098600 Salix brachista HOM05D002406 ORTHO05D007964 1.6e-06 58.9 346 21.4
THA.LOC104808195 Tarenaya hassleriana HOM05D002406 ORTHO05D007964 1.6e-06 58.9 288 22.2
Thecc.02G360900 Theobroma cacao HOM05D002406 ORTHO05D007964 1.6e-06 58.9 346 21.4
Potri.008G116800 Populus trichocarpa HOM05D002406 ORTHO05D007964 2.1e-06 58.5 346 21.4
CSS0035809 Camellia sinensis var. sinensis HOM05D002406 ORTHO05D007964 2.8e-06 58.2 329 22.2
CAN.G430.6 Capsicum annuum HOM05D002406 ORTHO05D007964 3.7e-06 57.8 288 20.8
Pp3c4_25980 Physcomitrium patens HOM05D002406 ORTHO05D007964 3.7e-06 57.8 300 23.3
Migut.K01266 Erythranthe guttata HOM05D002406 ORTHO05D007964 4.8e-06 57.4 289 21.8
ATR0681G159 Amborella trichopoda HOM05D002406 ORTHO05D007964 6.2e-06 57.0 288 20.5
Sabra08G0088500 Salix brachista HOM05D002406 ORTHO05D007964 6.2e-06 57.0 295 21.4
COL.COLO4_07869 Corchorus olitorius HOM05D002406 ORTHO05D007964 8.2e-06 56.6 288 20.5


User provided reference genes

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