Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold44G16771 Striga asiatica HOM05D006803 ORTHO05D008552 9.6e-89 330.1 163 100.0
SalBow4G1856 Salvia bowleyana HOM05D006803 ORTHO05D008552 3.7e-64 248.4 164 76.2
SalBow4G1881 Salvia bowleyana HOM05D006803 ORTHO05D008552 3.7e-64 248.4 164 76.2
Migut.F00254 Erythranthe guttata HOM05D006803 ORTHO05D008552 2.6e-62 242.3 164 74.4
Oeu044167.1 Olea europaea HOM05D006803 ORTHO05D008552 2.2e-56 222.6 165 70.9
Nn1g01776 Nelumbo nucifera HOM05D006803 ORTHO05D008552 6.5e-53 211.1 167 65.9
Peaxi162Scf00904g00457 Petunia axillaris HOM05D006803 ORTHO05D008552 1.1e-52 210.3 144 70.8
unitig_37.g11977 Utricularia gibba HOM05D000211 ORTHO05D002285 9.4e-52 207.2 135 74.1
Hma1.2p1_0327F.1_g126650 Hydrangea macrophylla HOM05D006803 ORTHO05D008552 2.1e-51 206.1 145 72.4
vmacro06587 Vaccinium macrocarpon HOM05D006803 ORTHO05D008552 2.1e-51 206.1 171 63.7
Manes.14G019756 Manihot esculenta HOM05D006803 ORTHO05D008552 2.7e-51 205.7 115 81.7
MBI06_g04289_MAGBIO Magnolia biondii HOM05D006803 ORTHO05D008552 6.1e-51 204.5 169 64.5
THA.LOC104825126 Tarenaya hassleriana HOM05D006803 ORTHO05D008552 6.1e-51 204.5 175 62.9
Actinidia34181 Actinidia chinensis HOM05D006803 ORTHO05D008552 1.0e-50 203.8 163 66.3
CAN.G108.11 Capsicum annuum HOM05D006803 ORTHO05D008552 1.4e-50 203.4 163 66.3
Gohir.D08G108400 Gossypium hirsutum HOM05D006803 ORTHO05D008552 1.8e-50 203.0 135 74.1
Gorai.004G116000 Gossypium raimondii HOM05D006803 ORTHO05D008552 1.8e-50 203.0 135 74.1
Dinv28351 Davidia involucrata HOM05D006803 ORTHO05D008552 2.3e-50 202.6 150 66.7
PGSC0003DMG400009065 Solanum tuberosum HOM05D006803 ORTHO05D008552 2.3e-50 202.6 155 65.2
FAN06G1048 Fragaria x ananassa HOM05D006803 ORTHO05D008552 3.9e-50 201.8 149 67.8
FAN06G4527 Fragaria x ananassa HOM05D006803 ORTHO05D008552 3.9e-50 201.8 149 67.8
Sed0009140 Sechium edule HOM05D006803 ORTHO05D008552 3.9e-50 201.8 124 78.2
ClCG05G008590 Citrullus lanatus HOM05D006803 ORTHO05D008552 6.7e-50 201.1 162 66.7
MELO3C006968.2 Cucumis melo HOM05D006803 ORTHO05D008552 6.7e-50 201.1 158 67.1
Ciclev10006070m.g Citrus clementina HOM05D006803 ORTHO05D008552 8.8e-50 200.7 162 64.8
Solyc03g007540.3 Solanum lycopersicum HOM05D006803 ORTHO05D008552 8.8e-50 200.7 155 64.5
Sopen03g003500 Solanum pennellii HOM05D006803 ORTHO05D008552 8.8e-50 200.7 155 64.5
TWI14G0759 Tripterygium wilfordii HOM05D006803 ORTHO05D008552 8.8e-50 200.7 132 75.8
Duzib084G0216 Durio zibethinus HOM05D006803 ORTHO05D008552 1.1e-49 200.3 135 73.3
TAR333G0006 Trochodendron aralioides HOM05D006803 ORTHO05D008552 2.0e-49 199.5 140 72.1
GSVIVG01028745001 Vitis vinifera HOM05D006803 ORTHO05D008552 2.6e-49 199.1 163 65.0
QL09p011586 Quercus lobata HOM05D006803 ORTHO05D008552 3.3e-49 198.7 152 64.5
Ca_19336_v3 Cicer arietinum L. HOM05D006803 ORTHO05D008552 4.4e-49 198.4 172 62.8
FvH4_7g30800 Fragaria vesca HOM05D006803 ORTHO05D008552 4.4e-49 198.4 133 70.7
Psat1g097000 Pisum sativum HOM05D006803 ORTHO05D008552 4.4e-49 198.4 157 66.9
RcHm_v2.0_Chr1g0379821 Rosa chinensis HOM05D006803 ORTHO05D008552 4.4e-49 198.4 150 66.0
CiPaw.05G259100 Carya illinoinensis HOM05D006803 ORTHO05D008552 5.7e-49 198.0 163 63.8
COL.COLO4_07418 Corchorus olitorius HOM05D006803 ORTHO05D008552 5.7e-49 198.0 146 69.9
Lj3C914T13 Lonicera japonica HOM05D006803 ORTHO05D008552 5.7e-49 198.0 159 67.9
Potri.012G033700 Populus trichocarpa HOM05D006803 ORTHO05D008552 5.7e-49 198.0 172 59.9
Cpa.g.sc3.33 Carica papaya HOM05D006803 ORTHO05D008552 7.4e-49 197.6 134 72.4
Prupe.2G305500 Prunus persica HOM05D006803 ORTHO05D008552 7.4e-49 197.6 167 63.5
Hund11694 Selenicereus undatus HOM05D006803 ORTHO05D008552 7.4e-49 197.6 158 66.5
FAN01G0710 Fragaria x ananassa HOM05D006803 ORTHO05D008552 9.7e-49 197.2 146 67.1
Thecc.03G190700 Theobroma cacao HOM05D006803 ORTHO05D008552 9.7e-49 197.2 124 79.0
FAN10G2870 Fragaria x ananassa HOM05D006803 ORTHO05D008552 1.7e-48 196.4 146 67.1
Sp6g15120 Schrenkiella parvula HOM05D006803 ORTHO05D008552 1.7e-48 196.4 132 75.0
AT5G52960 Arabidopsis thaliana HOM05D006803 ORTHO05D008552 2.2e-48 196.1 172 62.8
Gohir.A08G097600 Gossypium hirsutum HOM05D006803 ORTHO05D008552 2.2e-48 196.1 135 71.9
HanXRQChr09g0253111 Helianthus annuus HOM05D006803 ORTHO05D008552 2.2e-48 196.1 151 64.9
Aqoxy7G00212 Aquilegia oxysepala HOM05D006803 ORTHO05D008552 2.8e-48 195.7 171 64.9
C09p42680 Brassica napus HOM05D006803 ORTHO05D008552 2.8e-48 195.7 133 72.9
BolC9t57144H Brassica oleracea HOM05D006803 ORTHO05D008552 2.8e-48 195.7 133 72.9
BraA10t43128Z Brassica rapa HOM05D006803 ORTHO05D008552 2.8e-48 195.7 138 71.0
Thhalv10014833m.g Eutrema salsugineum HOM05D006803 ORTHO05D008552 2.8e-48 195.7 176 61.4
Phvul.004G101300 Phaseolus vulgaris HOM05D006803 ORTHO05D008552 2.8e-48 195.7 161 62.7
Cc02_g02040 Coffea canephora HOM05D006803 ORTHO05D008552 3.7e-48 195.3 97 88.7
FAN03G2299 Fragaria x ananassa HOM05D006803 ORTHO05D008552 3.7e-48 195.3 146 66.4
DCAR_014527 Daucus carota HOM05D006803 ORTHO05D008552 4.8e-48 194.9 156 63.5
PSO135G0887 Papaver somniferum HOM05D006803 ORTHO05D008552 4.8e-48 194.9 113 81.4
PSO384G2893 Papaver somniferum HOM05D006803 ORTHO05D008552 4.8e-48 194.9 113 81.4
A10p10450 Brassica napus HOM05D006803 ORTHO05D008552 6.3e-48 194.5 170 61.8
CDE03G0029 Ceratophyllum demersum HOM05D006803 ORTHO05D008552 6.3e-48 194.5 151 67.5
Carub.0008s1314 Capsella rubella HOM05D006803 ORTHO05D008552 8.2e-48 194.1 147 70.7
Aa31LG3G9190 Aethionema arabicum HOM05D006803 ORTHO05D008552 1.1e-47 193.7 175 62.3
VMungo0464G0281 Vigna mungo HOM05D006803 ORTHO05D008552 1.1e-47 193.7 164 63.4
AL8G27460 Arabidopsis lyrata HOM05D006803 ORTHO05D008552 1.8e-47 193.0 172 64.5
Eucgr.K00316 Eucalyptus grandis HOM05D006803 ORTHO05D008552 2.4e-47 192.6 113 82.3
Sed0024434 Sechium edule HOM05D006803 ORTHO05D008552 2.4e-47 192.6 154 64.9
arahy.Tifrunner.gnm1.ann1.GHK1U8 Arachis hypogaea HOM05D006803 ORTHO05D008552 3.1e-47 192.2 170 61.8
arahy.Tifrunner.gnm1.ann1.V6YLC6 Arachis hypogaea HOM05D006803 ORTHO05D008552 3.1e-47 192.2 170 61.8
CDE04G2534 Ceratophyllum demersum HOM05D006803 ORTHO05D008552 5.3e-47 191.4 130 73.1
Lsat_1_v5_gn_9_57340 Lactuca sativa HOM05D006803 ORTHO05D008552 5.3e-47 191.4 128 73.4
MD07G1283300 Malus domestica HOM05D006803 ORTHO05D008552 7.0e-47 191.0 111 75.7
TWI39G0241 Tripterygium wilfordii HOM05D006803 ORTHO05D008552 7.0e-47 191.0 149 64.4
TPR.G36689 Trifolium pratense HOM05D006803 ORTHO05D008552 9.1e-47 190.7 111 81.1
Sc19g0001080 Simmondsia chinensis HOM05D006803 ORTHO05D008552 1.2e-46 190.3 96 88.5
CANSAT21G0672 Cannabis sativa HOM05D006803 ORTHO05D008552 2.0e-46 189.5 98 85.7
Glyma.09G125800 Glycine max HOM05D006803 ORTHO05D008552 2.0e-46 189.5 135 71.1
MD01G1213500 Malus domestica HOM05D006803 ORTHO05D008552 2.0e-46 189.5 168 56.5
PGR142G1334 Punica granatum HOM05D006803 ORTHO05D008552 2.0e-46 189.5 158 62.0
Atru.chr1.293 Acer truncatum HOM05D006803 ORTHO05D008552 2.6e-46 189.1 182 58.2
Actinidia08612 Actinidia chinensis HOM05D006803 ORTHO05D008552 5.9e-46 188.0 172 61.6
CSS0034587 Camellia sinensis var. sinensis HOM05D006803 ORTHO05D008552 5.9e-46 188.0 96 86.5
Potri.016G123100 Populus trichocarpa HOM05D006803 ORTHO05D008552 1.7e-45 186.4 144 63.9
Medtr6g034205 Medicago truncatula HOM05D006803 ORTHO05D008552 2.2e-45 186.0 98 85.7
ATR0721G182 Amborella trichopoda HOM05D006803 ORTHO05D008552 2.9e-45 185.7 97 84.5
Rhsim03G0197200 Rhododendron simsii HOM05D006803 ORTHO05D008552 2.9e-45 185.7 98 86.7
Duzib205G0804 Durio zibethinus HOM05D006803 ORTHO05D008552 3.8e-45 185.3 127 72.4
Lalb_Chr01g0009661 Lupinus albus HOM05D006803 ORTHO05D008552 6.5e-45 184.5 152 63.2
Mapoly0006s0111 Marchantia polymorpha HOM05D006803 ORTHO05D008552 1.1e-44 183.7 113 71.7
EL10Ac3g05364 Beta vulgaris HOM05D006803 ORTHO05D008552 1.9e-44 183.0 155 60.0
Lj2g0024519 Lotus japonicus HOM05D006803 ORTHO05D008552 2.5e-44 182.6 144 64.6
Glyma.16G172700 Glycine max HOM05D006803 ORTHO05D008552 5.5e-44 181.4 134 66.4
ECA232G4170 Erigeron canadensis HOM05D006803 ORTHO05D008552 7.2e-44 181.0 139 67.6
Sabra15G0020600 Salix brachista HOM05D006803 ORTHO05D008552 3.6e-43 178.7 183 52.5
Os05g0569200 Oryza sativa ssp. japonica HOM05D006803 ORTHO05D008552 4.7e-43 178.3 162 57.4
Sabra15G0018100 Salix brachista HOM05D006803 ORTHO05D008552 8.0e-43 177.6 183 52.5
Zm00001eb296320 Zea mays HOM05D006803 ORTHO05D008552 3.0e-42 175.6 99 79.8
SMO169G0228 Selaginella moellendorffii HOM05D006803 ORTHO05D008552 3.4e-41 172.2 101 75.2
Nitab4.5_0000472g0050 Nicotiana tabacum HOM05D006803 ORTHO05D008552 2.2e-40 169.5 163 57.7
SEGI_13941 Sequoiadendron giganteum HOM05D006803 ORTHO05D008552 4.8e-40 168.3 120 68.3
Nitab4.5_0001331g0090 Nicotiana tabacum HOM05D006803 ORTHO05D008552 6.3e-40 167.9 153 60.8
Sabra12G0022800 Salix brachista HOM05D006803 ORTHO05D008552 7.0e-39 164.5 243 42.0
AagrBONN_evm.TU.Sc2ySwM_228.1351 Anthoceros agrestis HOM05D006803 ORTHO05D008552 1.6e-38 163.3 108 71.3
Pp3c4_26620 Physcomitrium patens HOM05D006803 ORTHO05D008552 1.7e-37 159.8 91 76.9
Pp3c26_8430 Physcomitrium patens HOM05D006803 ORTHO05D008552 6.5e-37 157.9 88 79.5
CARHR265930 Cardamine hirsuta HOM05D006803 ORTHO05D008552 5.7e-33 144.8 104 69.2
CBR_g9073 Chara braunii HOM05D006803 ORTHO05D008552 1.7e-32 143.3 127 56.7
Haze_00093 Corylus avellana HOM05D006803 ORTHO05D008552 2.2e-32 142.9 112 63.4
BcaB08g35659 Brassica carinata HOM05D006803 ORTHO05D008552 1.8e-31 139.8 135 56.3
HPP92_011456 Vanilla planifolia HOM05D006803 ORTHO05D008552 4.7e-27 125.2 65 86.2
Eucgr.L03342 Eucalyptus grandis HOM05D006803 ORTHO05D008552 1.2e-25 120.6 121 55.4
Oeu008094.1 Olea europaea HOM05D006803 ORTHO05D008552 1.2e-25 120.6 119 56.3
Oeu059677.1 Olea europaea HOM05D006803 ORTHO05D008552 3.7e-24 115.5 80 67.5
Oeu059693.1 Olea europaea HOM05D006803 ORTHO05D008552 5.4e-23 111.7 119 52.9
Thecc.03G190900 Theobroma cacao HOM05D006803 ORTHO05D008552 3.3e-12 75.9 36 97.2
RcHm_v2.0_Chr1g0379761 Rosa chinensis HOM05D006803 ORTHO05D008552 4.7e-11 72.0 35 91.4


User provided reference genes

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