Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold44G16697 Striga asiatica HOM05D000283 ORTHO05D006673 0.0e+00 1365.9 700 100.0
SGA_v2.0_scaffold60G20995 Striga asiatica HOM05D000283 ORTHO05D006673 1.2e-90 338.6 802 38.2
SalBow6G2235 Salvia bowleyana HOM05D000283 ORTHO05D006673 1.1e-43 182.6 1017 28.2
Migut.F00680 Erythranthe guttata HOM05D000283 ORTHO05D006673 1.5e-37 162.2 1008 27.8
SGA_v2.0_scaffold44G16695 Striga asiatica HOM05D000283 ORTHO05D006673 4.1e-35 154.1 690 30.7
MSTRG.27328 Avicennia marina HOM05D000283 ORTHO05D006673 1.1e-29 136.0 289 38.8
CSS0006513 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D006673 9.7e-29 132.9 451 31.7
CSS0040218 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D006673 2.8e-28 131.3 451 31.5
MSTRG.8954 Avicennia marina HOM05D000283 ORTHO05D006673 1.7e-25 122.1 275 40.7
Lj8A92T85 Lonicera japonica HOM05D000283 ORTHO05D006673 7.9e-23 113.2 278 38.1
Rhsim09G0155800 Rhododendron simsii HOM05D000283 ORTHO05D006673 1.8e-22 112.1 286 39.9
Sopen04g005360 Solanum pennellii HOM05D000283 ORTHO05D006673 2.3e-22 111.7 372 33.3
Solyc04g010185.1 Solanum lycopersicum HOM05D000283 ORTHO05D006673 9.7e-21 106.3 372 32.8
PGSC0003DMG400011483 Solanum tuberosum HOM05D000283 ORTHO05D006673 8.2e-20 103.2 371 32.6
Oeu025162.3 Olea europaea HOM05D000283 ORTHO05D006673 3.1e-19 101.3 285 37.5
Aqoxy2G01934 Aquilegia oxysepala HOM05D000283 ORTHO05D006673 1.9e-16 92.0 286 33.9
Duzib114G0075 Durio zibethinus HOM05D000283 ORTHO05D006673 3.2e-16 91.3 280 36.1
Hma1.2p1_0348F.1_g131680 Hydrangea macrophylla HOM05D000283 ORTHO05D006673 3.6e-15 87.8 293 35.8
Dinv25941 Davidia involucrata HOM05D000283 ORTHO05D004861 1.0e-14 86.3 259 34.7
CiPaw.01G279600 Carya illinoinensis HOM05D000283 ORTHO05D006673 5.2e-14 84.0 467 28.3
Gohir.A05G352800 Gossypium hirsutum HOM05D000283 ORTHO05D006673 1.1e-13 82.8 281 35.6
Medtr1g115950 Medicago truncatula HOM05D000283 ORTHO05D006673 2.2e-12 78.6 288 34.0
Gorai.012G066900 Gossypium raimondii HOM05D000283 ORTHO05D006673 2.8e-12 78.2 281 35.6
Cfa001559 Carpinus fangiana HOM05D000283 ORTHO05D005391 4.8e-12 77.4 253 34.8
Glyma.10G292400 Glycine max HOM05D000283 ORTHO05D006673 4.8e-12 77.4 263 36.1
Thecc.10G063100 Theobroma cacao HOM05D000283 ORTHO05D006673 4.8e-12 77.4 281 34.9
Phvul.007G007900 Phaseolus vulgaris HOM05D000283 ORTHO05D006673 6.3e-12 77.0 262 37.0
Gohir.D04G060201 Gossypium hirsutum HOM05D000283 ORTHO05D006673 8.2e-12 76.6 281 35.2
QL08p057512 Quercus lobata HOM05D000283 ORTHO05D006673 1.1e-11 76.3 275 35.6
RcHm_v2.0_Chr1g0365001 Rosa chinensis HOM05D000283 ORTHO05D006673 1.1e-11 76.3 271 33.2
Glyma.20G242400 Glycine max HOM05D000283 ORTHO05D006673 1.4e-11 75.9 283 36.7
Peaxi162Scf00135g00027 Petunia axillaris HOM05D000283 ORTHO05D006673 1.4e-11 75.9 241 32.8
arahy.Tifrunner.gnm1.ann1.SA4FWZ Arachis hypogaea HOM05D000283 ORTHO05D006673 4.1e-11 74.3 286 33.2
arahy.Tifrunner.gnm1.ann1.U4C8JV Arachis hypogaea HOM05D000283 ORTHO05D006673 4.1e-11 74.3 286 33.2
FvH4_7g20760 Fragaria vesca HOM05D000283 ORTHO05D006673 1.2e-10 72.8 269 34.2
FAN06G2682 Fragaria x ananassa HOM05D000283 ORTHO05D006673 1.6e-10 72.4 269 34.2
FAN06G0550 Fragaria x ananassa HOM05D000283 ORTHO05D006673 2.0e-10 72.0 269 34.2
FAN03G1488 Fragaria x ananassa HOM05D000283 ORTHO05D006673 2.6e-10 71.6 268 32.8
Nitab4.5_0006737g0060 Nicotiana tabacum HOM05D000283 ORTHO05D006673 1.0e-09 69.7 245 32.2
TAR633G0056 Trochodendron aralioides HOM05D000283 ORTHO05D006673 1.0e-09 69.7 288 33.7
Nitab4.5_0007221g0010 Nicotiana tabacum HOM05D000283 ORTHO05D006673 1.7e-09 68.9 241 32.0
Sabra10G0165500 Salix brachista HOM05D000283 ORTHO05D006673 1.7e-09 68.9 271 32.8
GSVIVG01032629001 Vitis vinifera HOM05D000283 ORTHO05D006673 2.2e-09 68.6 259 31.7
Lj5g0015824 Lotus japonicus HOM05D000283 ORTHO05D006673 5.0e-09 67.4 229 33.2
Lalb_Chr02g0143831 Lupinus albus HOM05D000283 ORTHO05D006673 8.5e-09 66.6 284 33.1
Prupe.2G224500 Prunus persica HOM05D000283 ORTHO05D006673 8.5e-09 66.6 275 33.5
FAN10G3387 Fragaria x ananassa HOM05D000283 ORTHO05D005391 1.5e-08 65.9 267 32.2
VMungo0720G0439 Vigna mungo HOM05D000283 ORTHO05D006673 2.5e-08 65.1 290 34.1
PSO478G2008 Papaver somniferum HOM05D000283 ORTHO05D006673 4.2e-08 64.3 247 32.4
Psat6g238520 Pisum sativum HOM05D000283 ORTHO05D006673 4.2e-08 64.3 285 32.3
Ciclev10033332m.g Citrus clementina HOM05D000283 ORTHO05D006673 5.5e-08 63.9 309 31.4
TPR.G10427 Trifolium pratense HOM05D000283 ORTHO05D006673 5.5e-08 63.9 238 32.8
Atru.chr12.593 Acer truncatum HOM05D000283 ORTHO05D006673 9.4e-08 63.2 467 26.6
TWI38G0559 Tripterygium wilfordii HOM05D000283 ORTHO05D006673 2.1e-07 62.0 327 30.3
MD07G1184600 Malus domestica HOM05D000283 ORTHO05D006673 4.7e-07 60.8 119 40.3
Duzib106G1116 Durio zibethinus HOM05D000283 ORTHO05D006673 6.1e-07 60.5 276 32.2
CiPaw.02G178500 Carya illinoinensis HOM05D000283 ORTHO05D006673 8.0e-07 60.1 128 39.8
Ca_11324_v3 Cicer arietinum L. HOM05D000283 ORTHO05D006673 1.4e-06 59.3 287 30.7
Nn2g11490 Nelumbo nucifera HOM05D000283 ORTHO05D006673 4.0e-06 57.8 253 29.6


User provided reference genes

Program Settings