Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold44G16695 Striga asiatica HOM05D000283 ORTHO05D006673 0.0e+00 1721.8 863 100.0
SalBow6G2235 Salvia bowleyana HOM05D000283 ORTHO05D006673 1.9e-87 328.2 1265 30.6
SGA_v2.0_scaffold60G20995 Striga asiatica HOM05D000283 ORTHO05D006673 5.5e-82 310.1 1119 31.9
MSTRG.27328 Avicennia marina HOM05D000283 ORTHO05D006673 6.0e-81 306.6 1311 29.0
Migut.F00680 Erythranthe guttata HOM05D000283 ORTHO05D006673 5.1e-80 303.5 1269 29.5
MSTRG.8954 Avicennia marina HOM05D000283 ORTHO05D006673 1.3e-75 288.9 1304 29.3
SGA_v2.0_scaffold44G16697 Striga asiatica HOM05D000283 ORTHO05D006673 1.4e-37 162.5 690 30.7
Oeu025162.3 Olea europaea HOM05D000283 ORTHO05D006673 2.1e-33 148.7 1102 25.7
Dinv25941 Davidia involucrata HOM05D000283 ORTHO05D004861 1.2e-23 116.3 650 27.7
Peaxi162Scf00135g00027 Petunia axillaris HOM05D000283 ORTHO05D006673 1.2e-23 116.3 640 27.3
PGSC0003DMG400011483 Solanum tuberosum HOM05D000283 ORTHO05D006673 1.3e-19 102.8 448 28.1
Nitab4.5_0006737g0060 Nicotiana tabacum HOM05D000283 ORTHO05D006673 1.7e-19 102.4 1249 23.1
Solyc04g010185.1 Solanum lycopersicum HOM05D000283 ORTHO05D006673 5.0e-19 100.9 448 27.5
Nitab4.5_0007221g0010 Nicotiana tabacum HOM05D000283 ORTHO05D006673 2.5e-18 98.6 629 27.0
Sopen04g005360 Solanum pennellii HOM05D000283 ORTHO05D006673 4.3e-18 97.8 448 27.2
QL08p057512 Quercus lobata HOM05D000283 ORTHO05D006673 5.2e-16 90.9 652 23.6
Rhsim09G0155800 Rhododendron simsii HOM05D000283 ORTHO05D006673 7.5e-15 87.0 279 31.2
Cc02_g08660 Coffea canephora HOM05D000283 ORTHO05D006673 1.4e-13 82.8 681 23.9
Cfa001559 Carpinus fangiana HOM05D000283 ORTHO05D005391 2.4e-13 82.0 497 25.6
Hma1.2p1_0348F.1_g131680 Hydrangea macrophylla HOM05D000283 ORTHO05D006673 3.2e-13 81.6 508 28.1
CSS0006513 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D006673 5.4e-13 80.9 724 25.0
CSS0040218 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D006673 9.2e-13 80.1 725 25.1
Ciclev10033332m.g Citrus clementina HOM05D000283 ORTHO05D006673 3.5e-12 78.2 282 28.4
Haze_16971 Corylus avellana HOM05D000283 ORTHO05D006673 1.0e-11 76.6 607 24.1
GSVIVG01032629001 Vitis vinifera HOM05D000283 ORTHO05D006673 2.5e-10 72.0 373 30.3
CiPaw.02G178500 Carya illinoinensis HOM05D000283 ORTHO05D006673 3.3e-10 71.6 570 25.1
Cpa.g.sc1.301 Carica papaya HOM05D000283 ORTHO05D006673 4.3e-10 71.2 624 26.3
COL.COLO4_29238 Corchorus olitorius HOM05D000283 ORTHO05D006673 5.2e-08 64.3 419 29.1
Thecc.10G063100 Theobroma cacao HOM05D000283 ORTHO05D006673 3.7e-06 58.2 502 26.7
Phvul.007G007900 Phaseolus vulgaris HOM05D000283 ORTHO05D006673 8.3e-06 57.0 386 26.9


User provided reference genes

Program Settings