Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold44G16643 Striga asiatica HOM05D006817 ORTHO05D008603 9.3e-254 879.8 465 100.0
Migut.F00593 Erythranthe guttata HOM05D006817 ORTHO05D008603 7.8e-184 647.5 502 72.3
MSTRG.27274 Avicennia marina HOM05D006817 ORTHO05D008603 2.2e-170 602.8 506 67.4
Oeu036532.1 Olea europaea HOM05D006817 ORTHO05D008603 4.4e-163 578.6 507 65.9
CSS0030257 Camellia sinensis var. sinensis HOM05D006817 ORTHO05D008603 4.1e-161 572.0 502 65.5
Actinidia00992 Actinidia chinensis HOM05D006817 ORTHO05D008603 3.9e-159 565.5 498 64.1
TAR623G0065 Trochodendron aralioides HOM05D006817 ORTHO05D008603 2.5e-158 562.8 509 63.5
Solyc06g050210.3 Solanum lycopersicum HOM05D006817 ORTHO05D008603 5.8e-155 551.6 496 63.7
Thecc.10G176900 Theobroma cacao HOM05D006817 ORTHO05D008603 9.9e-155 550.8 506 62.3
Peaxi162Scf00739g00017 Petunia axillaris HOM05D006817 ORTHO05D008603 1.7e-154 550.1 521 61.0
Sopen06g015650 Solanum pennellii HOM05D006817 ORTHO05D008603 1.7e-154 550.1 496 63.5
Atru.chr12.157 Acer truncatum HOM05D006817 ORTHO05D008603 2.2e-154 549.7 493 62.9
Nitab4.5_0011715g0010 Nicotiana tabacum HOM05D006817 ORTHO05D008603 2.9e-154 549.3 503 62.8
CAN.G169.4 Capsicum annuum HOM05D006817 ORTHO05D008603 4.9e-154 548.5 500 62.8
Ciclev10031264m.g Citrus clementina HOM05D006817 ORTHO05D008603 1.9e-153 546.6 506 61.1
GSVIVG01032704001 Vitis vinifera HOM05D006817 ORTHO05D008603 3.2e-153 545.8 503 62.6
arahy.Tifrunner.gnm1.ann1.6QBV89 Arachis hypogaea HOM05D006817 ORTHO05D008603 4.2e-153 545.4 500 61.4
arahy.Tifrunner.gnm1.ann1.6ZT9VY Arachis hypogaea HOM05D006817 ORTHO05D008603 5.4e-153 545.0 500 61.4
Cc02_g05530 Coffea canephora HOM05D006817 ORTHO05D008603 7.1e-153 544.7 501 63.3
PGR044G0301 Punica granatum HOM05D006817 ORTHO05D008603 2.7e-152 542.7 507 62.1
Gohir.A10G180300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 4.6e-152 542.0 505 61.2
Rhsim09G0184300 Rhododendron simsii HOM05D006817 ORTHO05D008603 4.6e-152 542.0 508 62.2
Lj5g0023407 Lotus japonicus HOM05D006817 ORTHO05D008603 6.6e-151 538.1 498 61.8
Gorai.011G210100 Gossypium raimondii HOM05D006817 ORTHO05D008603 1.9e-150 536.6 505 60.6
TWI09G1614 Tripterygium wilfordii HOM05D006817 ORTHO05D008603 5.6e-150 535.0 506 60.3
Psat6g035880 Pisum sativum HOM05D006817 ORTHO05D008603 9.6e-150 534.3 494 61.5
TPR.G24539 Trifolium pratense HOM05D006817 ORTHO05D008603 2.1e-149 533.1 497 62.4
Phvul.001G074700 Phaseolus vulgaris HOM05D006817 ORTHO05D008603 2.8e-149 532.7 501 61.7
Potri.019G048700 Populus trichocarpa HOM05D006817 ORTHO05D008603 4.8e-149 531.9 507 60.7
Nn2g10348 Nelumbo nucifera HOM05D006817 ORTHO05D008603 1.4e-148 530.4 502 60.6
vmacro09974 Vaccinium macrocarpon HOM05D006817 ORTHO05D008603 2.6e-147 526.2 505 61.0
Prupe.2G261900 Prunus persica HOM05D006817 ORTHO05D008603 3.4e-147 525.8 506 61.1
Dinv21831 Davidia involucrata HOM05D004766 ORTHO05D006159 4.4e-147 525.4 479 65.1
DCAR_014588 Daucus carota HOM05D006817 ORTHO05D008603 9.9e-147 524.2 504 60.1
Glyma.19G067100 Glycine max HOM05D006817 ORTHO05D008603 1.3e-146 523.9 499 61.1
Aqoxy4G02362 Aquilegia oxysepala HOM05D006817 ORTHO05D008603 2.9e-146 522.7 501 61.1
Eucgr.J00131 Eucalyptus grandis HOM05D006817 ORTHO05D008603 4.9e-146 521.9 501 61.1
Thhalv10013352m.g Eutrema salsugineum HOM05D006817 ORTHO05D008603 1.4e-145 520.4 499 58.9
PSO170G5674 Papaver somniferum HOM05D006817 ORTHO05D008603 3.2e-145 519.2 501 59.9
Medtr1g007630 Medicago truncatula HOM05D006817 ORTHO05D008603 4.2e-145 518.8 496 60.3
ECA232G4264 Erigeron canadensis HOM05D006817 ORTHO05D008603 2.7e-144 516.2 507 58.0
Lsat_1_v5_gn_9_59361 Lactuca sativa HOM05D006817 ORTHO05D008603 2.7e-144 516.2 505 58.6
Gohir.D10G187300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 3.5e-144 515.8 505 59.0
MD01G1164100 Malus domestica HOM05D006817 ORTHO05D008603 4.6e-144 515.4 498 60.2
Sp6g37510 Schrenkiella parvula HOM05D006817 ORTHO05D008603 3.9e-143 512.3 495 58.4
CsaV3_5G010750 Cucumis sativus L. HOM05D006817 ORTHO05D008603 1.1e-142 510.8 494 59.3
MELO3C020113.2 Cucumis melo HOM05D006817 ORTHO05D008603 1.9e-142 510.0 497 59.4
ClCG07G004850 Citrullus lanatus HOM05D006817 ORTHO05D008603 7.3e-142 508.1 503 58.1
THA.LOC104816518 Tarenaya hassleriana HOM05D006817 ORTHO05D008603 7.3e-142 508.1 496 58.9
Lalb_Chr22g0360921 Lupinus albus HOM05D006817 ORTHO05D008603 2.1e-141 506.5 494 59.1
Sed0020006 Sechium edule HOM05D006817 ORTHO05D008603 2.8e-141 506.1 502 58.4
COL.COLO4_10038 Corchorus olitorius HOM05D006817 ORTHO05D008603 8.1e-141 504.6 485 60.8
A10p30880 Brassica napus HOM05D006817 ORTHO05D008603 9.0e-140 501.1 487 58.3
BcaC06g32240 Brassica carinata HOM05D006817 ORTHO05D008603 1.2e-139 500.7 484 58.3
CDE04G2280 Ceratophyllum demersum HOM05D006817 ORTHO05D008603 2.0e-139 500.0 483 58.4
EL10Ac2g04256 Beta vulgaris HOM05D006817 ORTHO05D008603 2.2e-138 496.5 493 58.2
C09p71390 Brassica napus HOM05D006817 ORTHO05D008603 3.8e-138 495.7 484 58.1
BolC9t59902H Brassica oleracea HOM05D006817 ORTHO05D008603 1.1e-137 494.2 489 57.9
BraA10t45133Z Brassica rapa HOM05D006817 ORTHO05D008603 1.9e-137 493.4 494 57.5
Manes.10G004900 Manihot esculenta HOM05D006817 ORTHO05D008603 3.2e-137 492.7 494 59.7
MBI15_g27349_MAGBIO Magnolia biondii HOM05D006817 ORTHO05D008603 2.7e-136 489.6 567 54.3
AUR62003430 Chenopodium quinoa HOM05D006817 ORTHO05D008603 2.5e-134 483.0 487 57.7
HanXRQChr08g0222561 Helianthus annuus HOM05D006817 ORTHO05D008603 3.3e-134 482.6 503 55.7
HPP92_019064 Vanilla planifolia HOM05D006817 ORTHO05D008603 1.1e-132 477.6 490 56.1
ATR0681G057 Amborella trichopoda HOM05D006817 ORTHO05D008603 1.4e-132 477.2 494 58.3
HanXRQChr15g0493791 Helianthus annuus HOM05D006817 ORTHO05D008603 1.8e-132 476.9 481 57.6
Sc11g0005730 Simmondsia chinensis HOM05D006817 ORTHO05D008603 3.1e-132 476.1 498 56.0
Cpa.g.sc19.86 Carica papaya HOM05D006817 ORTHO05D008603 4.0e-132 475.7 503 55.7
Ah.16g104230 Amaranthus hybridus HOM05D006817 ORTHO05D008603 5.8e-131 471.9 526 54.2
PSO017G6024 Papaver somniferum HOM05D006817 ORTHO05D008603 6.5e-130 468.4 461 60.1
Zm00001eb406320 Zea mays HOM05D006817 ORTHO05D008603 6.5e-130 468.4 489 56.9
AUR62012358 Chenopodium quinoa HOM05D006817 ORTHO05D008603 7.1e-129 464.9 442 61.1
Os12g0112300 Oryza sativa ssp. japonica HOM05D006817 ORTHO05D008603 1.3e-127 460.7 479 54.7
Cfa001223 Carpinus fangiana HOM05D006817 ORTHO05D008603 4.8e-125 452.2 442 60.2
QL08p064576 Quercus lobata HOM05D006817 ORTHO05D008603 8.2e-125 451.4 458 59.4
FAN03G2834 Fragaria x ananassa HOM05D006817 ORTHO05D008603 4.5e-123 445.7 543 51.2
CANSAT56G1261 Cannabis sativa HOM05D006817 ORTHO05D008603 5.9e-123 445.3 453 58.5
Haze_17339 Corylus avellana HOM05D006817 ORTHO05D008603 3.8e-122 442.6 478 56.5
Sabra19G0058300 Salix brachista HOM05D000055 ORTHO05D000057 5.1e-119 432.2 463 54.4
Lj8A57G58 Lonicera japonica HOM05D006817 ORTHO05D008603 4.3e-118 429.1 406 62.8
Aa31LG11G6330 Aethionema arabicum HOM05D006817 ORTHO05D008603 1.6e-117 427.2 483 53.4
FAN01G1353 Fragaria x ananassa HOM05D006817 ORTHO05D008603 1.5e-115 420.6 456 55.5
FAN10G2384 Fragaria x ananassa HOM05D006817 ORTHO05D008603 2.9e-114 416.4 452 55.5
FvH4_7g25670 Fragaria vesca HOM05D006817 ORTHO05D008603 5.1e-111 405.6 389 60.2
CARHR207930 Cardamine hirsuta HOM05D006817 ORTHO05D008603 9.7e-110 401.4 360 60.3
CiPaw.02G198400 Carya illinoinensis HOM05D006817 ORTHO05D008603 8.2e-109 398.3 414 57.2
unitig_46.g18743 Utricularia gibba HOM05D006817 ORTHO05D008603 3.8e-106 389.4 480 50.4
AT5G05310 Arabidopsis thaliana HOM05D006817 ORTHO05D008603 4.4e-102 375.9 340 61.8
AUR62031486 Chenopodium quinoa HOM05D006817 ORTHO05D008603 1.7e-93 347.4 460 49.3
MD07G1231900 Malus domestica HOM05D006817 ORTHO05D008603 7.7e-83 312.0 365 54.8
Carub.0006s0424 Capsella rubella HOM05D006817 ORTHO05D008603 7.7e-75 285.4 283 57.6
Pp3c22_2490 Physcomitrium patens HOM05D006817 ORTHO05D008603 1.5e-73 281.2 498 39.4
RcHm_v2.0_Chr1g0371891 Rosa chinensis HOM05D006817 ORTHO05D008603 3.0e-71 273.5 254 61.4
Nitab4.5_0000109g0530 Nicotiana tabacum HOM05D006817 ORTHO05D008603 1.7e-69 267.7 237 62.9
Ca_12776_v3 Cicer arietinum L. HOM05D006817 ORTHO05D008603 4.1e-68 263.1 302 54.3
MSTRG.24128 Avicennia marina HOM05D006817 ORTHO05D008603 1.5e-65 254.6 156 84.6
RcHm_v2.0_Chr1g0371881 Rosa chinensis HOM05D006817 ORTHO05D008603 4.7e-64 249.6 164 76.8
VMungo0647G0650 Vigna mungo HOM05D006817 ORTHO05D008603 6.2e-64 249.2 215 61.9
VMungo0647G0362 Vigna mungo HOM05D006817 ORTHO05D008603 1.9e-57 227.6 252 55.2
MD05G1328700 Malus domestica HOM05D006817 ORTHO05D008603 4.4e-54 216.5 241 55.6
SEGI_05100 Sequoiadendron giganteum HOM05D006817 ORTHO05D008603 9.8e-54 215.3 224 53.1
MD07G1231800 Malus domestica HOM05D006817 ORTHO05D008603 5.4e-52 209.5 133 76.7
Oeu020109.1 Olea europaea HOM05D006817 ORTHO05D008603 4.0e-47 193.4 138 73.9
QL10p038395 Quercus lobata HOM05D006817 ORTHO05D008603 1.6e-40 171.4 143 68.5
QL05p063879 Quercus lobata HOM05D006817 ORTHO05D008603 1.7e-37 161.4 133 69.2
SEGI_41528 Sequoiadendron giganteum HOM05D006817 ORTHO05D008603 4.9e-29 133.3 111 63.1
QL03p030054 Quercus lobata HOM05D006817 ORTHO05D008603 3.2e-28 130.6 95 76.8
QL06p040335 Quercus lobata HOM05D006817 ORTHO05D008603 4.2e-28 130.2 93 77.4
FvH4_7g25690 Fragaria vesca HOM05D006817 ORTHO05D008603 3.9e-26 123.6 90 70.0
Cre08.g361000 Chlamydomonas reinhardtii HOM05D006817 ORTHO05D008603 6.7e-26 122.9 482 27.4
QL09p047975 Quercus lobata HOM05D000176 ORTHO05D000106 5.6e-25 119.8 93 73.1
Hund15836 Selenicereus undatus HOM05D006817 ORTHO05D008603 1.1e-23 115.5 72 79.2
FAN06G4794 Fragaria x ananassa HOM05D006817 ORTHO05D008603 9.0e-23 112.5 77 72.7
Os11g0112900 Oryza sativa ssp. japonica HOM05D006817 ORTHO05D008603 2.2e-21 107.8 91 65.9
QL08p064573 Quercus lobata HOM05D006817 ORTHO05D008603 6.0e-19 99.8 61 78.7
QL10p065865 Quercus lobata HOM05D006817 ORTHO05D008603 1.9e-17 94.7 74 71.6
FAN06G1140 Fragaria x ananassa HOM05D006817 ORTHO05D008603 1.5e-14 85.1 84 58.3
MD17G1183400 Malus domestica HOM05D006817 ORTHO05D008603 3.2e-12 77.4 55 74.5
Prupe.2G262300 Prunus persica HOM05D006817 ORTHO05D008603 2.8e-08 64.3 90 48.9
PGSC0003DMG400024308 Solanum tuberosum HOM05D006817 ORTHO05D008603 6.9e-07 59.7 42 66.7


User provided reference genes

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