Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold44G16637 Striga asiatica HOM05D005795 ORTHO05D007200 7.1e-275 949.9 452 100.0
Eucgr.A00272 Eucalyptus grandis HOM05D005795 ORTHO05D007200 5.9e-19 99.8 216 34.7
Psat1g007200 Pisum sativum HOM05D005795 ORTHO05D007200 7.7e-19 99.4 212 35.4
Oeu035829.1 Olea europaea HOM05D005795 ORTHO05D007200 7.2e-17 92.8 234 31.6
SHI30236 Sapria himalayana HOM05D005795 ORTHO05D007200 2.1e-16 91.3 197 32.0
TAR633G0878 Trochodendron aralioides HOM05D005795 ORTHO05D007200 2.7e-16 90.9 229 31.9
Eucgr.A00076 Eucalyptus grandis HOM05D005795 ORTHO05D007200 6.1e-16 89.7 192 32.3
Sc03g0006720 Simmondsia chinensis HOM05D005795 ORTHO05D007200 3.0e-15 87.4 207 29.5
Nitab4.5_0005570g0030 Nicotiana tabacum HOM05D005795 ORTHO05D007200 4.8e-13 80.1 136 34.6
Zm00001eb102710 Zea mays HOM05D005795 ORTHO05D007200 1.5e-11 75.1 163 33.7
Hma1.2p1_0754F.1_g213060 Hydrangea macrophylla HOM05D005795 ORTHO05D007200 3.4e-11 73.9 163 31.3
ATR0743G276 Amborella trichopoda HOM05D005795 ORTHO05D007200 5.9e-11 73.2 153 35.3
vmacro15646 Vaccinium macrocarpon HOM05D005795 ORTHO05D007200 7.7e-11 72.8 248 25.8
Dinv44196 Davidia involucrata HOM05D005795 ORTHO05D007200 1.0e-10 72.4 151 34.4
Rhsim02G0076300 Rhododendron simsii HOM05D005795 ORTHO05D007200 1.0e-10 72.4 282 24.1
Nitab4.5_0003132g0100 Nicotiana tabacum HOM05D005795 ORTHO05D007200 1.3e-10 72.0 181 25.4
Actinidia11305 Actinidia chinensis HOM05D005795 ORTHO05D007200 1.7e-10 71.6 153 34.0
Eucgr.A00077 Eucalyptus grandis HOM05D005795 ORTHO05D007200 2.9e-10 70.9 156 35.3
Lsat_1_v5_gn_6_55280 Lactuca sativa HOM05D005795 ORTHO05D007200 2.9e-10 70.9 221 26.2
HPP92_013540 Vanilla planifolia HOM05D005795 ORTHO05D007200 2.9e-10 70.9 132 34.1
Ca_01264_v3 Cicer arietinum L. HOM05D005795 ORTHO05D007200 3.8e-10 70.5 154 37.0
PGR083G1909 Punica granatum HOM05D005795 ORTHO05D007200 6.5e-10 69.7 139 36.7
ECA233G5655 Erigeron canadensis HOM05D005795 ORTHO05D007200 8.5e-10 69.3 153 33.3
Lsat_1_v5_gn_9_14160 Lactuca sativa HOM05D005795 ORTHO05D007200 8.5e-10 69.3 225 28.0
Lj3g0002937 Lotus japonicus HOM05D005795 ORTHO05D007200 1.1e-09 68.9 154 35.1
Nn1g09576 Nelumbo nucifera HOM05D005795 ORTHO05D007200 1.4e-09 68.6 153 32.7
Peaxi162Scf00375g00059 Petunia axillaris HOM05D005795 ORTHO05D007200 1.4e-09 68.6 126 33.3
RcHm_v2.0_Chr4g0407031 Rosa chinensis HOM05D005795 ORTHO05D007200 1.4e-09 68.6 153 33.3
CSS0047301 Camellia sinensis var. sinensis HOM05D005795 ORTHO05D007200 1.9e-09 68.2 153 32.7
HanXRQChr07g0186111 Helianthus annuus HOM05D005795 ORTHO05D007200 1.9e-09 68.2 151 33.8
Actinidia35971 Actinidia chinensis HOM05D005795 ORTHO05D007200 3.2e-09 67.4 126 34.1
Sabra07G0103500 Salix brachista HOM05D005795 ORTHO05D007200 3.2e-09 67.4 183 30.6
DCAR_003909 Daucus carota HOM05D005795 ORTHO05D007200 7.2e-09 66.2 250 23.6
SGA_v2.0_scaffold44G16633 Striga asiatica HOM05D056423 ORTHO05D406573 7.2e-09 66.2 218 25.2
Thecc.04G314000 Theobroma cacao HOM05D005795 ORTHO05D007200 7.2e-09 66.2 157 35.0
Ciclev10021008m.g Citrus clementina HOM05D005795 ORTHO05D007200 1.2e-08 65.5 131 37.4
Os09g0514400 Oryza sativa ssp. japonica HOM05D005795 ORTHO05D007200 3.6e-08 63.9 169 29.6
Pp3c9_24240 Physcomitrium patens HOM05D005795 ORTHO05D007200 3.6e-08 63.9 156 27.6
Cc05_g03950 Coffea canephora HOM05D005795 ORTHO05D007200 4.7e-08 63.5 158 29.7
Manes.04G041300 Manihot esculenta HOM05D005795 ORTHO05D007200 4.7e-08 63.5 156 33.3
PSO675G7496 Papaver somniferum HOM05D005795 ORTHO05D007200 6.1e-08 63.2 126 35.7
Duzib212G0505 Durio zibethinus HOM05D005795 ORTHO05D007200 1.0e-07 62.4 137 33.6
TWI38G2022 Tripterygium wilfordii HOM05D005795 ORTHO05D007200 1.4e-07 62.0 152 30.9
MSTRG.9769 Avicennia marina HOM05D005795 ORTHO05D007200 5.1e-07 60.1 126 32.5
COL.COLO4_21665 Corchorus olitorius HOM05D005795 ORTHO05D007200 5.1e-07 60.1 151 31.8
PSO732G0188 Papaver somniferum HOM05D005795 ORTHO05D007200 5.1e-07 60.1 126 34.9
Cc08_g05980 Coffea canephora HOM05D005795 ORTHO05D007200 1.1e-06 58.9 151 30.5
MELO3C017720.2 Cucumis melo HOM05D005795 ORTHO05D007200 1.5e-06 58.5 121 36.4
Cc05_g13970 Coffea canephora HOM05D005795 ORTHO05D007200 3.3e-06 57.4 151 30.5
Gohir.D05G287100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 3.3e-06 57.4 123 33.3
Gorai.009G302100 Gossypium raimondii HOM05D005795 ORTHO05D007200 3.3e-06 57.4 123 33.3
CsaV3_4G003310 Cucumis sativus L. HOM05D005795 ORTHO05D007200 4.4e-06 57.0 123 37.4
Gohir.A05G286100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 4.4e-06 57.0 123 32.5
BcaC06g32941 Brassica carinata HOM05D005795 ORTHO05D007200 5.7e-06 56.6 209 26.3


User provided reference genes

Program Settings