Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold44G16633 Striga asiatica HOM05D056423 ORTHO05D406573 1.4e-285 985.7 537 100.0
SGA_v2.0_scaffold44G16571 Striga asiatica HOM05D056423 ORTHO05D405263 2.4e-160 569.7 418 83.5
Eucgr.A00272 Eucalyptus grandis HOM05D005795 ORTHO05D007200 4.1e-11 73.9 266 25.6
Eucgr.A00076 Eucalyptus grandis HOM05D005795 ORTHO05D007200 1.3e-09 68.9 259 25.5
Sc03g0006720 Simmondsia chinensis HOM05D005795 ORTHO05D007200 2.2e-09 68.2 279 33.0
Oeu035829.1 Olea europaea HOM05D005795 ORTHO05D007200 6.5e-09 66.6 256 25.8
SGA_v2.0_scaffold44G16637 Striga asiatica HOM05D005795 ORTHO05D007200 1.1e-08 65.9 218 25.2
TAR633G0878 Trochodendron aralioides HOM05D005795 ORTHO05D007200 1.1e-08 65.9 262 24.4
Haze_01529 Corylus avellana HOM05D005795 ORTHO05D007200 1.5e-08 65.5 147 33.3
QL10p048508 Quercus lobata HOM05D005795 ORTHO05D007200 4.2e-08 63.9 142 34.5
Cfa015145 Carpinus fangiana HOM05D005795 ORTHO05D007200 1.2e-07 62.4 147 32.0
BcaC06g32941 Brassica carinata HOM05D005795 ORTHO05D007200 2.7e-07 61.2 257 30.7
Psat1g007200 Pisum sativum HOM05D005795 ORTHO05D007200 4.7e-07 60.5 262 24.0
SHI30236 Sapria himalayana HOM05D005795 ORTHO05D007200 8.0e-07 59.7 283 22.6
BolC1t02678H Brassica oleracea HOM05D005795 ORTHO05D000108 1.0e-06 59.3 145 30.3
C01p27420 Brassica napus HOM05D005795 ORTHO05D007200 1.8e-06 58.5 143 29.4
AT3G59380 Arabidopsis thaliana HOM05D005795 ORTHO05D007200 2.3e-06 58.2 143 29.4
Eucgr.A00077 Eucalyptus grandis HOM05D005795 ORTHO05D007200 3.0e-06 57.8 142 32.4
Thhalv10025709m.g Eutrema salsugineum HOM05D005795 ORTHO05D007200 3.0e-06 57.8 141 30.5
A01p22030 Brassica napus HOM05D005795 ORTHO05D007200 5.2e-06 57.0 141 29.8
BraA01t02109Z Brassica rapa HOM05D005795 ORTHO05D007200 5.2e-06 57.0 141 29.8
CANSAT78G1297 Cannabis sativa HOM05D005795 ORTHO05D007200 5.2e-06 57.0 272 32.7
FAN12G2789 Fragaria x ananassa HOM05D005795 ORTHO05D007200 5.2e-06 57.0 259 22.4
FAN12G0695 Fragaria x ananassa HOM05D005795 ORTHO05D007200 6.8e-06 56.6 259 22.4
COL.COLO4_21665 Corchorus olitorius HOM05D005795 ORTHO05D007200 8.8e-06 56.2 140 30.7
Rhsim02G0076300 Rhododendron simsii HOM05D005795 ORTHO05D007200 8.8e-06 56.2 78 37.2


User provided reference genes

Program Settings