Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold44G16622 Striga asiatica HOM05D005527 ORTHO05D006480 2.7e-138 495.4 256 100.0
Oeu063991.1 Olea europaea HOM05D005527 ORTHO05D006480 1.2e-82 310.5 269 63.2
Dinv43641 Davidia involucrata HOM05D005527 ORTHO05D006480 4.9e-79 298.5 174 83.3
vmacro21047 Vaccinium macrocarpon HOM05D005527 ORTHO05D006480 1.1e-78 297.4 174 83.3
Actinidia12159 Actinidia chinensis HOM05D005527 ORTHO05D006480 1.4e-78 297.0 175 82.9
Rhsim07G0034300 Rhododendron simsii HOM05D005527 ORTHO05D006480 7.0e-78 294.7 172 84.3
Oeu018737.2 Olea europaea HOM05D005527 ORTHO05D006480 9.2e-78 294.3 319 54.2
Actinidia40393 Actinidia chinensis HOM05D005527 ORTHO05D006480 1.2e-77 293.9 251 62.9
Nn6g33862 Nelumbo nucifera HOM05D005527 ORTHO05D006480 2.0e-77 293.1 175 81.7
vmacro13481 Vaccinium macrocarpon HOM05D005527 ORTHO05D006480 7.8e-77 291.2 174 81.0
CDE11G0157 Ceratophyllum demersum HOM05D005527 ORTHO05D006480 1.3e-76 290.4 175 81.7
Lju41A43T28 Lonicera japonica HOM05D005527 ORTHO05D006480 5.0e-76 288.5 174 80.5
CSS0037426 Camellia sinensis var. sinensis HOM05D005527 ORTHO05D006480 1.1e-75 287.3 174 79.3
TAR375G0575 Trochodendron aralioides HOM05D005527 ORTHO05D006480 1.1e-75 287.3 173 79.8
GSVIVG01022807001 Vitis vinifera HOM05D005527 ORTHO05D006480 4.3e-75 285.4 174 79.3
Manes.05G052500 Manihot esculenta HOM05D005527 ORTHO05D006480 1.2e-74 283.9 173 78.6
Migut.N01756 Erythranthe guttata HOM05D005527 ORTHO05D006480 1.6e-74 283.5 249 61.4
MSTRG.4922 Avicennia marina HOM05D005527 ORTHO05D006480 2.1e-74 283.1 174 78.7
Peaxi162Scf00392g00124 Petunia axillaris HOM05D005527 ORTHO05D006480 2.8e-74 282.7 203 70.4
Nitab4.5_0001818g0050 Nicotiana tabacum HOM05D005527 ORTHO05D006480 3.6e-74 282.3 203 70.4
Duzib133G0823 Durio zibethinus HOM05D005527 ORTHO05D006480 6.2e-74 281.6 173 79.2
MELO3C019920.2 Cucumis melo HOM05D005527 ORTHO05D006480 8.0e-74 281.2 174 77.0
CsaV3_6G004490 Cucumis sativus L. HOM05D005527 ORTHO05D006480 8.0e-74 281.2 174 77.0
Gohir.A08G059500 Gossypium hirsutum HOM05D005527 ORTHO05D006480 8.0e-74 281.2 173 78.0
Gohir.D08G068700 Gossypium hirsutum HOM05D005527 ORTHO05D006480 8.0e-74 281.2 173 78.0
Gorai.004G072000 Gossypium raimondii HOM05D005527 ORTHO05D006480 8.0e-74 281.2 173 78.0
Hma1.2p1_1740F.1_g300050 Hydrangea macrophylla HOM05D005527 ORTHO05D006480 8.0e-74 281.2 174 76.4
Potri.014G054400 Populus trichocarpa HOM05D005527 ORTHO05D006480 1.1e-73 280.8 173 76.9
Sabra14G0040300 Salix brachista HOM05D005527 ORTHO05D006480 1.1e-73 280.8 173 76.9
Solyc08g081430.3 Solanum lycopersicum HOM05D005527 ORTHO05D006480 1.1e-73 280.8 203 69.0
Sopen08g029750 Solanum pennellii HOM05D005527 ORTHO05D006480 1.4e-73 280.4 203 68.5
HPP92_021019 Vanilla planifolia HOM05D005527 ORTHO05D006480 1.4e-73 280.4 176 77.8
Potri.002G140700 Populus trichocarpa HOM05D005527 ORTHO05D006480 1.8e-73 280.0 173 76.3
Thecc.01G389600 Theobroma cacao HOM05D005527 ORTHO05D006480 2.3e-73 279.6 201 70.6
SalBow5G2512 Salvia bowleyana HOM05D005527 ORTHO05D006480 4.0e-73 278.9 174 75.9
CiPaw.03G272900 Carya illinoinensis HOM05D005527 ORTHO05D006480 5.2e-73 278.5 173 75.1
Lsat_1_v5_gn_3_129561 Lactuca sativa HOM05D005527 ORTHO05D006480 5.2e-73 278.5 262 59.5
PGSC0003DMG401012327 Solanum tuberosum HOM05D005527 ORTHO05D006480 5.2e-73 278.5 203 68.0
arahy.Tifrunner.gnm1.ann1.TVCQ13 Arachis hypogaea HOM05D005527 ORTHO05D006480 1.2e-72 277.3 173 75.1
Ciclev10021461m.g Citrus clementina HOM05D005527 ORTHO05D006480 1.5e-72 276.9 173 76.9
SalBow5G5418 Salvia bowleyana HOM05D005527 ORTHO05D006480 1.5e-72 276.9 174 75.3
Cpa.g.sc5.224 Carica papaya HOM05D005527 ORTHO05D006480 2.0e-72 276.6 183 74.3
Duzib138G0956 Durio zibethinus HOM05D005527 ORTHO05D006480 2.6e-72 276.2 173 76.9
SGA_v2.0_scaffold116G32305 Striga asiatica HOM05D005527 ORTHO05D006480 2.6e-72 276.2 174 76.4
CAN.G532.17 Capsicum annuum HOM05D005527 ORTHO05D006480 3.4e-72 275.8 203 67.5
Cfa016649 Carpinus fangiana HOM05D002184 ORTHO05D006480 3.4e-72 275.8 171 76.0
Sabra02G0109800 Salix brachista HOM05D005527 ORTHO05D006480 3.4e-72 275.8 173 76.3
CANSAT01G0875 Cannabis sativa HOM05D005527 ORTHO05D006480 4.4e-72 275.4 173 74.6
CANSAT01G3075 Cannabis sativa HOM05D005527 ORTHO05D006480 4.4e-72 275.4 173 74.6
Phvul.L007001 Phaseolus vulgaris HOM05D005527 ORTHO05D006480 4.4e-72 275.4 185 72.4
Nitab4.5_0002874g0100 Nicotiana tabacum HOM05D005527 ORTHO05D006480 5.8e-72 275.0 200 69.0
arahy.Tifrunner.gnm1.ann1.PVA962 Arachis hypogaea HOM05D005527 ORTHO05D006480 9.8e-72 274.2 171 75.4
Rhsim01G0137400 Rhododendron simsii HOM05D005527 ORTHO05D006480 9.8e-72 274.2 228 64.5
Prupe.8G211200 Prunus persica HOM05D005527 ORTHO05D006480 1.7e-71 273.5 171 76.0
Thhalv10028875m.g Eutrema salsugineum HOM05D005527 ORTHO05D006480 2.2e-71 273.1 212 65.1
EL10Ac7g17978 Beta vulgaris HOM05D005527 ORTHO05D006480 2.9e-71 272.7 172 76.7
BcaB01g02205 Brassica carinata HOM05D005527 ORTHO05D006480 2.9e-71 272.7 174 75.3
C09p00040 Brassica napus HOM05D005527 ORTHO05D006480 2.9e-71 272.7 174 75.3
BraA09t35678Z Brassica rapa HOM05D005527 ORTHO05D006480 2.9e-71 272.7 174 75.3
TWI59G1399 Tripterygium wilfordii HOM05D005527 ORTHO05D006480 3.7e-71 272.3 174 75.3
Carub.0006s3720 Capsella rubella HOM05D005527 ORTHO05D006480 4.9e-71 271.9 183 74.3
MD05G1185000 Malus domestica HOM05D005527 ORTHO05D006480 4.9e-71 271.9 205 68.3
COL.COLO4_12437 Corchorus olitorius HOM05D005527 ORTHO05D006480 6.4e-71 271.6 221 64.3
DCAR_025077 Daucus carota HOM05D005527 ORTHO05D006480 6.4e-71 271.6 207 66.2
AT4G00026 Arabidopsis thaliana HOM05D005527 ORTHO05D006480 8.3e-71 271.2 174 74.7
CARHR248050 Cardamine hirsuta HOM05D005527 ORTHO05D006480 1.1e-70 270.8 174 75.3
MD10G1173000 Malus domestica HOM05D005527 ORTHO05D006480 1.1e-70 270.8 210 67.1
BolC9t52939H Brassica oleracea HOM05D005527 ORTHO05D006480 1.4e-70 270.4 174 75.3
THA.LOC104814072 Tarenaya hassleriana HOM05D005527 ORTHO05D006480 1.4e-70 270.4 174 74.7
AL6G53490 Arabidopsis lyrata HOM05D005527 ORTHO05D006480 1.9e-70 270.0 174 74.1
VMungo0720G0088 Vigna mungo HOM05D005527 ORTHO05D006480 1.9e-70 270.0 186 72.0
Eucgr.D01510 Eucalyptus grandis HOM05D005527 ORTHO05D006480 2.4e-70 269.6 237 61.2
Glyma.20G215800 Glycine max HOM05D005527 ORTHO05D006480 2.4e-70 269.6 185 71.9
Glyma.10G175000 Glycine max HOM05D005527 ORTHO05D006480 4.1e-70 268.9 185 71.4
QL09p042955 Quercus lobata HOM05D005527 ORTHO05D006480 5.4e-70 268.5 173 71.7
AUR62001190 Chenopodium quinoa HOM05D005527 ORTHO05D006480 1.2e-69 267.3 185 70.8
AUR62022137 Chenopodium quinoa HOM05D005527 ORTHO05D006480 1.6e-69 266.9 219 63.0
PGR004G2692 Punica granatum HOM05D005527 ORTHO05D006480 3.5e-69 265.8 213 64.8
Lalb_Chr21g0311731 Lupinus albus HOM05D005527 ORTHO05D006480 4.6e-69 265.4 247 58.7
Ca_09921_v3 Cicer arietinum L. HOM05D005527 ORTHO05D006480 7.8e-69 264.6 175 73.7
ECA240G4071 Erigeron canadensis HOM05D005527 ORTHO05D006480 1.7e-68 263.5 175 72.6
Lalb_Chr02g0149681 Lupinus albus HOM05D005527 ORTHO05D006480 1.7e-68 263.5 173 74.6
Atru.chr10.1194 Acer truncatum HOM05D005527 ORTHO05D006480 2.3e-68 263.1 198 67.7
Lj5g0022618 Lotus japonicus HOM05D005527 ORTHO05D006480 3.0e-68 262.7 233 59.7
Sed0026275 Sechium edule HOM05D005527 ORTHO05D006480 3.0e-68 262.7 172 72.7
Zm00001eb010980 Zea mays HOM05D005527 ORTHO05D006480 3.0e-68 262.7 177 75.7
BcaB01g02184 Brassica carinata HOM05D005527 ORTHO05D006480 3.9e-68 262.3 175 72.0
ATR0767G019 Amborella trichopoda HOM05D005527 ORTHO05D006480 5.1e-68 261.9 173 74.0
Psat6g111240 Pisum sativum HOM05D005527 ORTHO05D006480 5.1e-68 261.9 175 73.1
Medtr1g077430 Medicago truncatula HOM05D005527 ORTHO05D006480 8.6e-68 261.2 217 61.8
Cc00_g20470 Coffea canephora HOM05D005527 ORTHO05D006480 1.5e-67 260.4 217 64.5
RcHm_v2.0_Chr6g0285911 Rosa chinensis HOM05D005527 ORTHO05D006480 1.9e-67 260.0 173 72.8
Ah.08g218760 Amaranthus hybridus HOM05D005527 ORTHO05D006480 2.5e-67 259.6 173 71.7
unitig_0.g2761 Utricularia gibba HOM05D005527 ORTHO05D006480 3.3e-67 259.2 175 70.3
Dinv44079 Davidia involucrata HOM05D005527 ORTHO05D006480 1.6e-66 256.9 178 75.3
C08p29870 Brassica napus HOM05D005527 ORTHO05D006480 6.2e-66 255.0 207 64.7
A09p47660 Brassica napus HOM05D005527 ORTHO05D006480 1.4e-65 253.8 175 72.0
BraA09t40222Z Brassica rapa HOM05D005527 ORTHO05D006480 4.0e-65 252.3 175 72.0
FvH4_7g06430 Fragaria vesca HOM05D005527 ORTHO05D006480 4.4e-64 248.8 173 69.4
FAN01G2831 Fragaria x ananassa HOM05D005527 ORTHO05D006480 4.4e-64 248.8 173 69.4
FAN06G1845 Fragaria x ananassa HOM05D004480 ORTHO05D005546 4.4e-64 248.8 173 69.4
FAN10G1488 Fragaria x ananassa HOM05D004480 ORTHO05D005546 4.4e-64 248.8 173 69.4
ClCG08G008500 Citrullus lanatus HOM05D005527 ORTHO05D006480 7.5e-64 248.1 188 66.0
PSO063G6553 Papaver somniferum HOM05D005527 ORTHO05D006480 9.9e-64 247.7 192 65.1
SHI13602 Sapria himalayana HOM05D005527 ORTHO05D006480 1.3e-63 247.3 172 70.3
TPR.G8872 Trifolium pratense HOM05D005527 ORTHO05D006480 2.9e-63 246.1 247 57.5
AagrBONN_evm.TU.Sc2ySwM_117.1379 Anthoceros agrestis HOM05D005527 ORTHO05D006480 3.2e-62 242.7 164 71.3
Sp6g00070 Schrenkiella parvula HOM05D005527 ORTHO05D006480 1.2e-61 240.7 150 76.0
Aa31LG5G80 Aethionema arabicum HOM05D005527 ORTHO05D006480 1.6e-61 240.4 210 61.0
SMO201G0136 Selaginella moellendorffii HOM05D005527 ORTHO05D006480 1.3e-60 237.3 164 68.9
FAN03G2170 Fragaria x ananassa HOM05D005527 ORTHO05D006480 5.1e-60 235.3 197 60.9
Mapoly0168s0006 Marchantia polymorpha HOM05D005527 ORTHO05D006480 1.6e-58 230.3 173 64.7
Pp3c2_16760 Physcomitrium patens HOM05D005527 ORTHO05D006480 1.4e-57 227.3 188 62.8
Nn1g00907 Nelumbo nucifera HOM05D005527 ORTHO05D006480 9.9e-56 221.1 138 79.0
Aqoxy3G02804 Aquilegia oxysepala HOM05D000030 ORTHO05D000023 2.1e-53 213.4 150 70.0
CBR_g6321 Chara braunii HOM05D005527 ORTHO05D000048 2.1e-53 213.4 174 60.3
Hund14311 Selenicereus undatus HOM05D005527 ORTHO05D006480 2.3e-52 209.9 126 79.4
BcaC07g39791 Brassica carinata HOM05D005527 ORTHO05D006480 8.7e-52 208.0 207 56.0
HanXRQChr13g0422791 Helianthus annuus HOM05D005527 ORTHO05D006480 1.1e-51 207.6 153 68.0
BolC8t50598H Brassica oleracea HOM05D005527 ORTHO05D006480 2.8e-50 203.0 227 52.9
BcaB02g08455 Brassica carinata HOM05D005527 ORTHO05D006480 3.4e-48 196.1 207 54.6
DCAR_025031 Daucus carota HOM05D005527 ORTHO05D006480 4.4e-48 195.7 156 64.1
SEGI_20492 Sequoiadendron giganteum HOM05D005527 ORTHO05D006480 4.6e-45 185.7 122 73.8
CSS0049638 Camellia sinensis var. sinensis HOM05D005527 ORTHO05D006480 3.3e-43 179.5 113 77.0
Oeu018739.1 Olea europaea HOM05D005527 ORTHO05D006480 1.3e-39 167.5 97 82.5
FAN23G2762 Fragaria x ananassa HOM05D005527 ORTHO05D006480 1.8e-28 130.6 173 44.5
Haze_19655 Corylus avellana HOM05D002184 ORTHO05D002379 1.9e-27 127.1 96 63.5
Cre09.g405550 Chlamydomonas reinhardtii HOM05D005527 ORTHO05D006480 3.7e-26 122.9 149 42.3
A09p00830 Brassica napus HOM05D005527 ORTHO05D006480 8.2e-26 121.7 82 73.2
FAN19G1210 Fragaria x ananassa HOM05D005527 ORTHO05D006480 8.2e-26 121.7 167 47.3
MCO09G641 Micromonas commoda HOM05D005527 ORTHO05D006480 1.4e-25 120.9 137 45.3
PRCOL_00001529 Prasinoderma coloniale HOM05D005527 ORTHO05D006480 6.9e-25 118.6 141 45.4
CANSAT01G1020 Cannabis sativa HOM05D001299 ORTHO05D001985 1.3e-23 114.4 78 64.1
CSS0016661 Camellia sinensis var. sinensis HOM05D005527 ORTHO05D006480 4.2e-22 109.4 61 82.0
CSS0044998 Camellia sinensis var. sinensis HOM05D005527 ORTHO05D006480 4.2e-22 109.4 61 82.0
Sc14g0006170 Simmondsia chinensis HOM05D005527 ORTHO05D006480 1.8e-20 104.0 60 80.0
Os03g0253800 Oryza sativa ssp. japonica HOM05D005527 ORTHO05D006480 3.0e-20 103.2 62 77.4
ECA240G0336 Erigeron canadensis HOM05D002424 ORTHO05D002640 4.5e-16 89.4 88 58.0
FAN28G0427 Fragaria x ananassa HOM05D005527 ORTHO05D006480 1.3e-10 71.2 113 40.7
Glyma.06G247300 Glycine max HOM05D006695 ORTHO05D008239 1.4e-09 67.8 43 69.8
Glyma.08G276700 Glycine max HOM05D005527 ORTHO05D006480 2.9e-07 60.1 38 71.1
HanXRQChr11g0351331 Helianthus annuus HOM05D005527 ORTHO05D006480 1.9e-06 57.4 57 56.1


User provided reference genes

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