Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold44G16610 Striga asiatica HOM05D008620 ORTHO05D011304 1.3e-76 289.7 146 100.0
SGA_v2.0_scaffold121G33144 Striga asiatica HOM05D008620 ORTHO05D011304 1.6e-34 149.8 107 72.9
SGA_v2.0_scaffold627G53254 Striga asiatica HOM05D008620 ORTHO05D011304 1.4e-30 136.7 102 69.6
SGA_v2.0_scaffold121G33134 Striga asiatica HOM05D008620 ORTHO05D011304 1.8e-30 136.3 93 74.2
SGA_v2.0_scaffold121G33149 Striga asiatica HOM05D008620 ORTHO05D011304 1.8e-30 136.3 101 69.3
SGA_v2.0_scaffold49G18104 Striga asiatica HOM05D008620 ORTHO05D011304 1.2e-29 133.7 99 70.7
SGA_v2.0_scaffold121G33146 Striga asiatica HOM05D008620 ORTHO05D011304 2.6e-29 132.5 101 68.3
SGA_v2.0_scaffold143G35776 Striga asiatica HOM05D008620 ORTHO05D011304 8.5e-28 127.5 107 61.7
TAR628G0251 Trochodendron aralioides HOM05D008620 ORTHO05D011304 1.3e-20 103.6 86 65.1
MBI18_g21804_MAGBIO Magnolia biondii HOM05D008620 ORTHO05D011304 2.9e-20 102.4 104 56.7
SGA_v2.0_scaffold221G42752 Striga asiatica HOM05D008620 ORTHO05D011304 1.5e-16 90.1 99 53.5
MBI12_g36691_MAGBIO Magnolia biondii HOM05D008620 ORTHO05D011304 6.3e-15 84.7 91 53.8
ATR0855G001 Amborella trichopoda HOM05D008620 ORTHO05D011304 2.2e-12 76.3 89 50.6
FAN28G0556 Fragaria x ananassa HOM05D008620 ORTHO05D011304 5.0e-12 75.1 74 55.4
FAN19G0360 Fragaria x ananassa HOM05D008620 ORTHO05D011304 1.1e-11 73.9 74 55.4
Os03g0430575 Oryza sativa ssp. japonica HOM05D008620 ORTHO05D011304 1.6e-10 70.1 103 46.6
Lsat_1_v5_gn_2_129941 Lactuca sativa HOM05D008620 ORTHO05D011304 2.1e-10 69.7 68 54.4
SGA_v2.0_scaffold146G36260 Striga asiatica HOM05D022033 ORTHO05D020747 2.1e-10 69.7 66 56.1
FAN14G3868 Fragaria x ananassa HOM05D008620 ORTHO05D011304 5.2e-09 65.1 77 49.4
Lsat_1_v5_gn_8_115540 Lactuca sativa HOM05D008620 ORTHO05D011304 2.2e-07 59.7 69 55.1
SalBow5G0621 Salvia bowleyana HOM05D008620 ORTHO05D011304 2.8e-07 59.3 45 64.4
SGA_v2.0_scaffold186G40148 Striga asiatica HOM05D008620 ORTHO05D011304 2.8e-07 59.3 95 40.0
MBI19_g32860_MAGBIO Magnolia biondii HOM05D008620 ORTHO05D011304 2.4e-06 56.2 72 47.2
SGA_v2.0_scaffold21G09498 Striga asiatica HOM05D008620 ORTHO05D011304 3.1e-06 55.8 71 45.1
Nitab4.5_0000287g0120 Nicotiana tabacum HOM05D008620 ORTHO05D011304 7.0e-06 54.7 78 46.2
Nitab4.5_0007100g0070 Nicotiana tabacum HOM05D008620 ORTHO05D011304 9.1e-06 54.3 36 69.4
Os03g0158800 Oryza sativa ssp. japonica HOM05D008620 ORTHO05D011304 9.1e-06 54.3 67 46.3


User provided reference genes

Program Settings