Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold44G16569 Striga asiatica HOM05D010075 ORTHO05D016365 4.0e-243 844.3 425 100.0
Zm00001eb324190 Zea mays HOM05D010075 ORTHO05D017268 9.1e-30 135.6 387 32.6
Zm00001eb423900 Zea mays HOM05D010075 ORTHO05D016365 6.5e-20 102.8 333 33.0
Os02g0573601 Oryza sativa ssp. japonica HOM05D010075 ORTHO05D016365 1.0e-17 95.5 324 33.3
Os06g0141133 Oryza sativa ssp. japonica HOM05D010075 ORTHO05D017268 1.0e-17 95.5 406 28.1
Os04g0454250 Oryza sativa ssp. japonica HOM05D010075 ORTHO05D016365 1.8e-17 94.7 247 35.6
SGA_v2.0_scaffold121G33080 Striga asiatica HOM05D010075 ORTHO05D026014 1.8e-14 84.7 171 35.7
Os07g0131725 Oryza sativa ssp. japonica HOM05D010075 ORTHO05D017268 8.5e-12 75.9 127 42.5
Os04g0453450 Oryza sativa ssp. japonica HOM05D010075 ORTHO05D016365 3.0e-09 67.4 348 29.6
SGA_v2.0_scaffold62G21553 Striga asiatica HOM05D010075 ORTHO05D017268 3.0e-09 67.4 90 43.3
ATR0739G198 Amborella trichopoda HOM05D030640 ORTHO05D017268 6.8e-09 66.2 144 36.1
SGA_v2.0_scaffold306G48016 Striga asiatica HOM05D010075 ORTHO05D017268 3.4e-08 63.9 207 30.0
Os01g0567533 Oryza sativa ssp. japonica HOM05D010075 ORTHO05D026014 9.7e-08 62.4 128 35.2
Zm00001eb160000 Zea mays HOM05D010075 ORTHO05D026014 3.7e-07 60.5 153 33.3
ATR0618G258 Amborella trichopoda HOM05D030640 ORTHO05D017268 1.8e-06 58.2 126 35.7


User provided reference genes

Program Settings