Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold44G16558 Striga asiatica HOM05D003935 ORTHO05D005096 1.3e-182 642.9 315 100.0
Migut.F00500 Erythranthe guttata HOM05D003935 ORTHO05D005096 2.5e-170 602.1 313 93.3
MSTRG.27208 Avicennia marina HOM05D003935 ORTHO05D005096 8.1e-169 597.0 313 92.3
CSS0046772 Camellia sinensis var. sinensis HOM05D003935 ORTHO05D005096 4.5e-167 591.3 313 91.4
Oeu031400.2 Olea europaea HOM05D003935 ORTHO05D005096 4.5e-167 591.3 314 91.4
SalBow1G3743 Salvia bowleyana HOM05D003935 ORTHO05D005096 1.0e-166 590.1 313 92.3
vmacro09915 Vaccinium macrocarpon HOM05D003935 ORTHO05D005096 8.4e-166 587.0 313 90.4
Eucgr.K00175 Eucalyptus grandis HOM05D003935 ORTHO05D005096 1.4e-165 586.3 313 90.4
Hma1.2p1_1132F.1_g260170 Hydrangea macrophylla HOM05D003935 ORTHO05D005096 1.9e-165 585.9 313 90.4
Lj1C977G12 Lonicera japonica HOM05D003935 ORTHO05D005096 9.3e-165 583.6 336 85.7
Manes.06G132800 Manihot esculenta HOM05D003935 ORTHO05D005096 1.6e-164 582.8 313 89.5
PGR142G1672 Punica granatum HOM05D003935 ORTHO05D005096 4.6e-164 581.3 313 89.5
TWI14G1423 Tripterygium wilfordii HOM05D003935 ORTHO05D005096 1.0e-163 580.1 313 88.8
Dinv16851 Davidia involucrata HOM05D003935 ORTHO05D005096 1.3e-163 579.7 313 89.5
Rhsim09G0190400 Rhododendron simsii HOM05D003935 ORTHO05D005096 2.3e-163 578.9 328 86.6
Hma1.2p1_0432F.1_g151940 Hydrangea macrophylla HOM05D003935 ORTHO05D005096 3.9e-163 578.2 313 89.1
CSS0045715 Camellia sinensis var. sinensis HOM05D003935 ORTHO05D005096 5.1e-163 577.8 313 89.8
Nn6g33882 Nelumbo nucifera HOM05D003935 ORTHO05D005096 5.1e-163 577.8 313 89.5
Potri.001G126500 Populus trichocarpa HOM05D003935 ORTHO05D005096 5.1e-163 577.8 314 89.8
Sopen06g010820 Solanum pennellii HOM05D003935 ORTHO05D005096 5.1e-163 577.8 313 89.1
Actinidia01047 Actinidia chinensis HOM05D003935 ORTHO05D005096 6.7e-163 577.4 313 88.5
CAN.G330.5 Capsicum annuum HOM05D003935 ORTHO05D005096 6.7e-163 577.4 313 89.1
Glyma.09G231000 Glycine max HOM05D003935 ORTHO05D005096 1.1e-162 576.6 313 87.9
Solyc06g034160.3 Solanum lycopersicum HOM05D003935 ORTHO05D005096 1.1e-162 576.6 313 88.8
Peaxi162Scf00304g01342 Petunia axillaris HOM05D003935 ORTHO05D005096 4.3e-162 574.7 312 88.8
Nitab4.5_0000448g0060 Nicotiana tabacum HOM05D003935 ORTHO05D005096 7.4e-162 573.9 313 89.1
Cfa012922 Carpinus fangiana HOM05D003935 ORTHO05D005096 9.6e-162 573.5 313 87.5
AL8G38190 Arabidopsis lyrata HOM05D003935 ORTHO05D005096 1.3e-161 573.2 313 87.2
Atru.chr1.845 Acer truncatum HOM05D003935 ORTHO05D005096 1.6e-161 572.8 315 87.6
TAR374G1483 Trochodendron aralioides HOM05D003935 ORTHO05D005096 1.6e-161 572.8 313 87.5
Aqoxy7G00829 Aquilegia oxysepala HOM05D003935 ORTHO05D005096 2.1e-161 572.4 313 87.2
AT5G61500 Arabidopsis thaliana HOM05D003935 ORTHO05D005096 2.8e-161 572.0 313 87.5
COL.COLO4_12445 Corchorus olitorius HOM05D003935 ORTHO05D005096 2.8e-161 572.0 313 88.5
Thhalv10004633m.g Eutrema salsugineum HOM05D003935 ORTHO05D005096 3.7e-161 571.6 314 88.2
Thecc.01G388100 Theobroma cacao HOM05D003935 ORTHO05D005096 3.7e-161 571.6 313 88.8
GSVIVG01018224001 Vitis vinifera HOM05D003935 ORTHO05D005096 4.8e-161 571.2 313 87.9
PGSC0003DMG400021594 Solanum tuberosum HOM05D003935 ORTHO05D005096 8.2e-161 570.5 313 88.8
Lalb_Chr19g0126281 Lupinus albus HOM05D003935 ORTHO05D005096 1.1e-160 570.1 313 86.3
MSTRG.8834 Avicennia marina HOM05D003935 ORTHO05D005096 1.4e-160 569.7 313 87.5
CARHR275270 Cardamine hirsuta HOM05D003935 ORTHO05D005096 1.8e-160 569.3 313 86.9
Carub.0008s2219 Capsella rubella HOM05D003935 ORTHO05D005096 2.4e-160 568.9 313 86.9
HanXRQChr15g0485951 Helianthus annuus HOM05D003935 ORTHO05D005096 9.0e-160 567.0 313 86.6
Duzib133G0969 Durio zibethinus HOM05D003935 ORTHO05D005096 1.2e-159 566.6 314 87.9
Glyma.12G005700 Glycine max HOM05D003935 ORTHO05D005096 1.5e-159 566.2 313 87.2
Potri.003G107000 Populus trichocarpa HOM05D003935 ORTHO05D005096 2.6e-159 565.5 315 88.6
Sabra01G0097600 Salix brachista HOM05D003935 ORTHO05D005096 4.5e-159 564.7 314 86.9
Sp2g24700 Schrenkiella parvula HOM05D003935 ORTHO05D005096 4.5e-159 564.7 313 86.3
CANSAT21G2109 Cannabis sativa HOM05D003935 ORTHO05D005096 5.9e-159 564.3 313 85.9
Gorai.004G165200 Gossypium raimondii HOM05D003935 ORTHO05D005096 5.9e-159 564.3 314 88.9
THA.LOC104801570 Tarenaya hassleriana HOM05D003935 ORTHO05D005096 7.6e-159 563.9 313 86.6
Gohir.D08G159150 Gossypium hirsutum HOM05D003935 ORTHO05D005096 1.0e-158 563.5 314 88.9
Duzib138G0818 Durio zibethinus HOM05D003935 ORTHO05D005096 2.9e-158 562.0 314 87.9
Cpa.g.sc16.168 Carica papaya HOM05D003935 ORTHO05D005096 3.8e-158 561.6 313 86.6
DCAR_020181 Daucus carota HOM05D003935 ORTHO05D005096 6.5e-158 560.8 313 86.3
Gohir.A08G137866 Gossypium hirsutum HOM05D003935 ORTHO05D005096 1.1e-157 560.1 314 88.2
Lalb_Chr01g0000281 Lupinus albus HOM05D003935 ORTHO05D005096 1.1e-157 560.1 313 85.9
THA.LOC104819415 Tarenaya hassleriana HOM05D003935 ORTHO05D005096 1.9e-157 559.3 314 86.0
QL04p034713 Quercus lobata HOM05D003935 ORTHO05D005096 3.2e-157 558.5 314 87.6
QL02p025668 Quercus lobata HOM05D003935 ORTHO05D005096 1.2e-156 556.6 313 86.3
VMungo1127G0071 Vigna mungo HOM05D003935 ORTHO05D005096 1.2e-156 556.6 313 85.0
Lsat_1_v5_gn_5_9340 Lactuca sativa HOM05D003935 ORTHO05D005096 1.6e-156 556.2 313 84.7
Lj3g0013928 Lotus japonicus HOM05D003935 ORTHO05D005096 1.6e-156 556.2 313 84.7
Phvul.011G006500 Phaseolus vulgaris HOM05D003935 ORTHO05D005096 1.6e-156 556.2 313 85.9
CsaV3_6G008640 Cucumis sativus L. HOM05D003935 ORTHO05D005096 2.1e-156 555.8 313 84.7
Gohir.D07G154200 Gossypium hirsutum HOM05D003935 ORTHO05D005096 2.1e-156 555.8 314 86.6
Gorai.001G176400 Gossypium raimondii HOM05D003935 ORTHO05D005096 2.1e-156 555.8 314 86.6
Sp6g35250 Schrenkiella parvula HOM05D003935 ORTHO05D005096 2.1e-156 555.8 313 85.0
Nitab4.5_0000262g0090 Nicotiana tabacum HOM05D003935 ORTHO05D005096 2.7e-156 555.4 313 87.2
Cc02_g04470 Coffea canephora HOM05D003935 ORTHO05D005096 6.1e-156 554.3 317 84.2
Thhalv10014155m.g Eutrema salsugineum HOM05D003935 ORTHO05D005096 6.1e-156 554.3 313 84.7
BcaC06g33155 Brassica carinata HOM05D003935 ORTHO05D005096 7.9e-156 553.9 313 84.7
AUR62002246 Chenopodium quinoa HOM05D003935 ORTHO05D005096 7.9e-156 553.9 313 85.3
arahy.Tifrunner.gnm1.ann1.YZL4IN Arachis hypogaea HOM05D003935 ORTHO05D005096 1.0e-155 553.5 313 86.3
TPR.G3680 Trifolium pratense HOM05D003935 ORTHO05D005096 1.3e-155 553.1 313 85.3
Actinidia13591 Actinidia chinensis HOM05D003935 ORTHO05D005096 1.8e-155 552.7 309 87.1
unitig_37.g12492 Utricularia gibba HOM05D003935 ORTHO05D005096 1.8e-155 552.7 313 86.6
Aa31LG11G1910 Aethionema arabicum HOM05D003935 ORTHO05D005096 3.0e-155 552.0 312 84.9
Gohir.A07G148000 Gossypium hirsutum HOM05D003935 ORTHO05D005096 3.0e-155 552.0 314 85.7
Sed0016106 Sechium edule HOM05D003935 ORTHO05D005096 3.9e-155 551.6 313 84.3
MELO3C022280.2 Cucumis melo HOM05D003935 ORTHO05D005096 5.1e-155 551.2 313 84.7
ClCG06G002480 Citrullus lanatus HOM05D003935 ORTHO05D005096 6.7e-155 550.8 313 84.3
Haze_21276 Corylus avellana HOM05D003935 ORTHO05D005096 8.7e-155 550.4 320 84.4
PSO782G0781 Papaver somniferum HOM05D003935 ORTHO05D005096 1.1e-154 550.1 315 86.0
CiPaw.14G023500 Carya illinoinensis HOM05D003935 ORTHO05D005096 1.5e-154 549.7 313 85.6
HanXRQChr16g0512861 Helianthus annuus HOM05D003935 ORTHO05D005096 1.5e-154 549.7 313 84.0
Medtr4g036265 Medicago truncatula HOM05D003935 ORTHO05D005096 1.5e-154 549.7 313 84.7
Psat7g207040 Pisum sativum HOM05D003935 ORTHO05D005096 1.5e-154 549.7 313 84.7
PSO063G2499 Papaver somniferum HOM05D003935 ORTHO05D005096 4.3e-154 548.1 315 85.7
BolC7t45044H Brassica oleracea HOM05D003935 ORTHO05D005096 1.1e-152 543.5 314 84.1
Rhsim03G0165100 Rhododendron simsii HOM05D003935 ORTHO05D005096 3.1e-152 542.0 337 79.5
C07p45210 Brassica napus HOM05D003935 ORTHO05D005096 6.9e-152 540.8 314 83.8
Sabra03G0073800 Salix brachista HOM05D003935 ORTHO05D005096 1.0e-150 537.0 381 73.2
arahy.Tifrunner.gnm1.ann1.2B4GQV Arachis hypogaea HOM05D003935 ORTHO05D005096 5.0e-150 534.6 309 84.1
arahy.Tifrunner.gnm1.ann1.16SP4W Arachis hypogaea HOM05D003935 ORTHO05D005096 6.5e-150 534.3 313 83.4
Prupe.2G123000 Prunus persica HOM05D003935 ORTHO05D005096 2.5e-149 532.3 313 83.7
FAN06G4162 Fragaria x ananassa HOM05D003935 ORTHO05D005096 3.2e-149 531.9 315 82.9
FvH4_7g09530 Fragaria vesca HOM05D003935 ORTHO05D005096 4.2e-149 531.6 315 82.9
FAN03G1633 Fragaria x ananassa HOM05D003935 ORTHO05D005096 4.2e-149 531.6 315 83.2
FAN06G5089 Fragaria x ananassa HOM05D003935 ORTHO05D005096 4.2e-149 531.6 315 82.9
CDE04G2838 Ceratophyllum demersum HOM05D003935 ORTHO05D005096 5.5e-149 531.2 304 84.2
FAN01G1603 Fragaria x ananassa HOM05D003935 ORTHO05D005096 7.2e-149 530.8 315 82.5
FAN10G2569 Fragaria x ananassa HOM05D003935 ORTHO05D005096 1.2e-148 530.0 315 82.5
FAN10G4028 Fragaria x ananassa HOM05D003935 ORTHO05D005096 1.2e-148 530.0 315 82.5
MD02G1218100 Malus domestica HOM05D003935 ORTHO05D005096 2.7e-148 528.9 313 83.4
BcaB05g21604 Brassica carinata HOM05D003935 ORTHO05D005096 7.9e-148 527.3 315 81.9
RcHm_v2.0_Chr1g0346321 Rosa chinensis HOM05D003935 ORTHO05D005096 3.0e-147 525.4 315 83.2
Ciclev10005442m.g Citrus clementina HOM05D003935 ORTHO05D005096 8.8e-147 523.9 319 80.9
arahy.Tifrunner.gnm1.ann1.9TCX0P Arachis hypogaea HOM05D003935 ORTHO05D005096 2.0e-146 522.7 309 83.5
BolC2t06285H Brassica oleracea HOM05D003935 ORTHO05D005096 7.4e-146 520.8 316 81.6
Hund04562 Selenicereus undatus HOM05D003935 ORTHO05D005096 6.3e-145 517.7 310 80.6
EL10Ac3g05885 Beta vulgaris HOM05D003935 ORTHO05D005096 2.2e-142 509.2 285 85.6
Nitab4.5_0001267g0110 Nicotiana tabacum HOM05D003935 ORTHO05D005096 3.8e-142 508.4 282 87.9
Mapoly0003s0208 Marchantia polymorpha HOM05D003935 ORTHO05D005096 8.5e-142 507.3 317 77.6
ECA232G4201 Erigeron canadensis HOM05D003935 ORTHO05D005096 3.2e-141 505.4 294 82.0
BcaC03g13194 Brassica carinata HOM05D003935 ORTHO05D005096 5.5e-141 504.6 316 79.4
CiPaw.07G237000 Carya illinoinensis HOM05D003935 ORTHO05D005096 5.5e-141 504.6 325 77.2
Sc10g0008570 Simmondsia chinensis HOM05D003935 ORTHO05D005096 3.6e-140 501.9 283 84.8
BraA02t04926Z Brassica rapa HOM05D003935 ORTHO05D005096 4.7e-140 501.5 313 79.2
Ah.07g207480 Amaranthus hybridus HOM05D003935 ORTHO05D005096 1.0e-139 500.4 288 84.0
C02p03220 Brassica napus HOM05D004498 ORTHO05D005300 5.2e-139 498.0 314 78.7
Aa31LG3G18800 Aethionema arabicum HOM05D003935 ORTHO05D005096 1.1e-138 496.9 313 79.9
Ca_12623_v3 Cicer arietinum L. HOM05D003935 ORTHO05D005096 3.3e-138 495.4 313 78.3
Haze_02753 Corylus avellana HOM05D003935 ORTHO05D005096 4.1e-136 488.4 462 58.2
BraA03t13837Z Brassica rapa HOM05D003935 ORTHO05D005096 7.7e-135 484.2 313 76.7
Lsat_1_v5_gn_9_51820 Lactuca sativa HOM05D003935 ORTHO05D005096 1.7e-134 483.0 313 77.0
A03p47100 Brassica napus HOM05D003935 ORTHO05D005096 2.2e-134 482.6 313 76.4
Pp3c8_11900 Physcomitrium patens HOM05D003935 ORTHO05D005096 8.0e-132 474.2 311 75.6
Os01g0200000 Oryza sativa ssp. japonica HOM05D003935 ORTHO05D005096 5.0e-126 454.9 316 71.8
SMO134G0003 Selaginella moellendorffii HOM05D003935 ORTHO05D005096 7.2e-125 451.1 312 68.9
Actinidia24986 Actinidia chinensis HOM05D003935 ORTHO05D005096 1.8e-123 446.4 240 89.6
BcaC06g33158 Brassica carinata HOM05D003935 ORTHO05D005096 6.8e-123 444.5 260 84.2
ATR0057G070 Amborella trichopoda HOM05D003935 ORTHO05D005096 4.1e-120 435.3 284 73.6
Zm00001eb391210 Zea mays HOM05D003935 ORTHO05D005096 5.0e-118 428.3 314 68.5
AUR62015457 Chenopodium quinoa HOM05D003935 ORTHO05D005096 6.8e-99 364.8 213 81.2
Nitab4.5_0001358g0020 Nicotiana tabacum HOM05D003935 ORTHO05D005096 1.2e-84 317.4 177 85.3
CBR_g28076 Chara braunii HOM05D003935 ORTHO05D000002 4.7e-84 315.5 252 61.9
Dinv06578 Davidia involucrata HOM05D003935 ORTHO05D005096 8.9e-83 311.2 173 85.5
MD07G1099100 Malus domestica HOM05D003935 ORTHO05D005096 3.8e-81 305.8 192 79.2
MCO14G260 Micromonas commoda HOM05D003935 ORTHO05D005096 3.1e-75 286.2 309 50.2
Cre02.g102350 Chlamydomonas reinhardtii HOM05D003935 ORTHO05D005096 1.5e-74 283.9 312 49.4
arahy.Tifrunner.gnm1.ann1.VY970J Arachis hypogaea HOM05D003935 ORTHO05D005096 7.8e-71 271.6 164 81.1
AagrBONN_evm.TU.Sc2ySwM_369.216 Anthoceros agrestis HOM05D003935 ORTHO05D005096 1.3e-70 270.8 274 54.0
Nn051s41922 Nelumbo nucifera HOM05D003935 ORTHO05D005096 3.6e-68 262.7 151 82.1
Nn1g09078 Nelumbo nucifera HOM05D003935 ORTHO05D005096 3.6e-68 262.7 151 82.1
SEGI_20183 Sequoiadendron giganteum HOM05D003935 ORTHO05D005096 4.9e-65 252.3 168 69.0
arahy.Tifrunner.gnm1.ann1.XHAQ77 Arachis hypogaea HOM05D003935 ORTHO05D005096 2.5e-61 240.0 184 68.5
PRCOL_00004022 Prasinoderma coloniale HOM05D003935 ORTHO05D005096 1.3e-60 237.7 300 43.7
CsaV3_4G004080 Cucumis sativus L. HOM05D003935 ORTHO05D044846 4.8e-60 235.7 288 48.6
Nitab4.5_0001358g0040 Nicotiana tabacum HOM05D003935 ORTHO05D001473 5.8e-58 228.8 112 96.4
Haze_27326 Corylus avellana HOM05D003935 ORTHO05D005096 4.9e-57 225.7 304 42.4
Os10g0560450 Oryza sativa ssp. japonica HOM05D003935 ORTHO05D005096 6.0e-55 218.8 182 62.1
Rhsim01G0073400 Rhododendron simsii HOM05D003935 ORTHO05D005096 2.9e-49 199.9 149 70.5
MELO3C032833.2 Cucumis melo HOM05D003935 ORTHO05D044846 3.2e-48 196.4 301 43.9
Rhsim06G0236800 Rhododendron simsii HOM05D003935 ORTHO05D005096 7.1e-48 195.3 142 70.4
Zm00001eb216570 Zea mays HOM05D003935 ORTHO05D005096 3.0e-46 189.9 130 70.0
Zm00001eb363440 Zea mays HOM05D003935 ORTHO05D005096 1.9e-45 187.2 113 76.1
Zm00001eb003720 Zea mays HOM05D003935 ORTHO05D005096 7.4e-45 185.3 113 75.2
Zm00001eb078430 Zea mays HOM05D003935 ORTHO05D005096 7.4e-45 185.3 113 75.2
Rhsim11G0131000 Rhododendron simsii HOM05D003935 ORTHO05D005096 2.8e-44 183.3 179 58.1
AL7G47000 Arabidopsis lyrata HOM05D003935 ORTHO05D003430 1.1e-43 181.4 170 59.4
BcaB05g21605 Brassica carinata HOM05D003935 ORTHO05D005096 3.1e-43 179.9 137 65.0
SEGI_13739 Sequoiadendron giganteum HOM05D003935 ORTHO05D005096 6.9e-43 178.7 100 83.0
Rhsim06G0096100 Rhododendron simsii HOM05D003935 ORTHO05D005096 2.2e-36 157.1 116 70.7
Lj2A404G32 Lonicera japonica HOM05D000092 ORTHO05D000042 3.7e-36 156.4 277 35.7
BcaC04g19029 Brassica carinata HOM05D003935 ORTHO05D005096 3.8e-33 146.4 114 68.4
BcaB01g00746 Brassica carinata HOM05D003935 ORTHO05D005096 4.7e-31 139.4 108 63.9
SEGI_32586 Sequoiadendron giganteum HOM05D003935 ORTHO05D005096 5.9e-26 122.5 68 82.4
A09p20840 Brassica napus HOM05D000772 ORTHO05D003239 1.4e-24 117.9 80 73.8
BraA09t37687Z Brassica rapa HOM05D000772 ORTHO05D003239 1.4e-24 117.9 80 73.8
MD07G1099000 Malus domestica HOM05D003935 ORTHO05D005096 6.1e-23 112.5 59 84.7
Actinidia10778 Actinidia chinensis HOM05D003935 ORTHO05D005096 7.4e-21 105.5 90 66.7
CBR_g28077 Chara braunii HOM05D003935 ORTHO05D005096 7.4e-21 105.5 72 63.9
arahy.Tifrunner.gnm1.ann1.W2J7UU Arachis hypogaea HOM05D003935 ORTHO05D023770 3.1e-19 100.1 53 86.8
Lj9A23G20 Lonicera japonica HOM05D000092 ORTHO05D000042 2.0e-18 97.4 117 44.4
C03p26610 Brassica napus HOM05D003935 ORTHO05D023770 2.9e-17 93.6 53 81.1
Rhsim12G0075300 Rhododendron simsii HOM05D016728 ORTHO05D338590 5.0e-17 92.8 102 52.9
SalBow2G0135 Salvia bowleyana HOM05D003935 ORTHO05D357983 2.1e-15 87.4 47 85.1
Zm00001eb269920 Zea mays HOM05D001580 ORTHO05D001517 2.7e-15 87.0 49 83.7
BcaC03g17887 Brassica carinata HOM05D003935 ORTHO05D005096 3.8e-09 66.6 44 72.7
Zm00001eb395010 Zea mays HOM05D034860 ORTHO05D442630 8.0e-07 58.9 37 64.9
Atru.chr2.3021 Acer truncatum HOM05D003935 ORTHO05D052568 4.0e-06 56.6 51 58.8
Zm00001eb363380 Zea mays HOM05D003935 ORTHO05D445556 6.8e-06 55.8 37 62.2


User provided reference genes

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