Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold44G16541 Striga asiatica HOM05D005644 ORTHO05D007092 1.7e-108 396.0 192 100.0
Oeu050374.1 Olea europaea HOM05D005644 ORTHO05D007092 5.4e-99 364.4 192 91.1
SalBow5G1882 Salvia bowleyana HOM05D005644 ORTHO05D007092 3.5e-98 361.7 192 90.6
MSTRG.3592 Avicennia marina HOM05D005644 ORTHO05D007092 6.0e-98 360.9 192 90.1
Dinv39995 Davidia involucrata HOM05D005644 ORTHO05D007092 7.8e-98 360.5 192 90.1
Cc07_g09670 Coffea canephora HOM05D005644 ORTHO05D007092 5.1e-97 357.8 192 89.6
Migut.L00368 Erythranthe guttata HOM05D005644 ORTHO05D007092 5.1e-97 357.8 192 89.1
Migut.L00376 Erythranthe guttata HOM05D005644 ORTHO05D007092 5.1e-97 357.8 192 89.1
Oeu002799.2 Olea europaea HOM05D005644 ORTHO05D007092 8.7e-97 357.1 192 89.1
Lalb_Chr09g0333481 Lupinus albus HOM05D005644 ORTHO05D007092 1.5e-96 356.3 191 87.4
Potri.007G023500 Populus trichocarpa HOM05D005644 ORTHO05D007092 5.6e-96 354.4 190 88.4
arahy.Tifrunner.gnm1.ann1.59MT2Q Arachis hypogaea HOM05D005644 ORTHO05D007092 7.3e-96 354.0 191 87.4
TWI73G0320 Tripterygium wilfordii HOM05D005644 ORTHO05D007092 1.6e-95 352.8 190 87.9
arahy.Tifrunner.gnm1.ann1.SR5TCU Arachis hypogaea HOM05D005644 ORTHO05D007092 2.8e-95 352.1 191 86.9
Gohir.A02G166400 Gossypium hirsutum HOM05D005644 ORTHO05D007092 2.8e-95 352.1 190 88.9
Psat4g094240 Pisum sativum HOM05D005644 ORTHO05D007092 3.6e-95 351.7 191 87.4
PGSC0003DMG400015483 Solanum tuberosum HOM05D005644 ORTHO05D007092 3.6e-95 351.7 192 88.0
Potri.005G121700 Populus trichocarpa HOM05D005644 ORTHO05D007092 4.7e-95 351.3 190 87.9
vmacro17823 Vaccinium macrocarpon HOM05D005644 ORTHO05D007092 4.7e-95 351.3 191 89.0
Manes.02G095200 Manihot esculenta HOM05D005644 ORTHO05D007092 1.1e-94 350.1 190 87.4
Medtr8g077200 Medicago truncatula HOM05D005644 ORTHO05D007092 1.1e-94 350.1 191 86.9
Solyc02g062680.3 Solanum lycopersicum HOM05D005644 ORTHO05D007092 1.1e-94 350.1 192 87.5
Sopen02g013700 Solanum pennellii HOM05D005644 ORTHO05D007092 1.1e-94 350.1 192 87.5
Thecc.01G033400 Theobroma cacao HOM05D005644 ORTHO05D007092 1.1e-94 350.1 190 88.4
Ca_22319_v3 Cicer arietinum L. HOM05D005644 ORTHO05D007092 1.4e-94 349.7 191 86.4
Phvul.003G254800 Phaseolus vulgaris HOM05D005644 ORTHO05D007092 1.8e-94 349.4 191 85.9
Glyma.16G138200 Glycine max HOM05D005644 ORTHO05D007092 2.4e-94 349.0 191 85.9
Gohir.D03G013600 Gossypium hirsutum HOM05D005644 ORTHO05D007092 2.4e-94 349.0 190 87.9
Gorai.003G013900 Gossypium raimondii HOM05D005644 ORTHO05D007092 2.4e-94 349.0 190 87.9
MELO3C026580.2 Cucumis melo HOM05D005644 ORTHO05D007092 3.1e-94 348.6 190 86.8
CiPaw.02G018800 Carya illinoinensis HOM05D005644 ORTHO05D007092 4.0e-94 348.2 190 86.3
PSO675G1163 Papaver somniferum HOM05D005644 ORTHO05D007092 4.0e-94 348.2 192 84.9
Ciclev10022394m.g Citrus clementina HOM05D005644 ORTHO05D007092 5.2e-94 347.8 190 86.8
CsaV3_3G042790 Cucumis sativus L. HOM05D005644 ORTHO05D007092 5.2e-94 347.8 190 86.8
QL06p046522 Quercus lobata HOM05D005644 ORTHO05D007092 6.9e-94 347.4 187 87.2
PSO541G0643 Papaver somniferum HOM05D005644 ORTHO05D007092 9.0e-94 347.1 192 84.9
Prupe.7G156300 Prunus persica HOM05D005644 ORTHO05D007092 1.2e-93 346.7 190 87.4
AT2G18290 Arabidopsis thaliana HOM05D005644 ORTHO05D007092 2.0e-93 345.9 190 84.7
Eucgr.I02428 Eucalyptus grandis HOM05D005644 ORTHO05D007092 2.0e-93 345.9 190 85.8
TAR101G0001 Trochodendron aralioides HOM05D005644 ORTHO05D007092 2.0e-93 345.9 190 86.8
AL3G51550 Arabidopsis lyrata HOM05D005644 ORTHO05D007092 2.6e-93 345.5 190 84.7
Lj2A454T58 Lonicera japonica HOM05D005644 ORTHO05D007092 2.6e-93 345.5 190 87.9
Sed0008907 Sechium edule HOM05D005644 ORTHO05D007092 2.6e-93 345.5 190 86.3
MD02G1145400 Malus domestica HOM05D005644 ORTHO05D007092 5.8e-93 344.4 190 86.8
Manes.01G136400 Manihot esculenta HOM05D005644 ORTHO05D007092 5.8e-93 344.4 188 86.7
Nn1g04949 Nelumbo nucifera HOM05D005644 ORTHO05D007092 7.6e-93 344.0 190 87.4
unitig_37.g12363 Utricularia gibba HOM05D005644 ORTHO05D007092 2.2e-92 342.4 192 84.9
CAN.G53.17 Capsicum annuum HOM05D005644 ORTHO05D007092 3.8e-92 341.7 192 84.4
Duzib264G1010 Durio zibethinus HOM05D005644 ORTHO05D007092 3.8e-92 341.7 190 85.8
GSVIVG01018941001 Vitis vinifera HOM05D005644 ORTHO05D007092 3.8e-92 341.7 190 86.3
Aa31LG8G15730 Aethionema arabicum HOM05D005644 ORTHO05D007092 4.9e-92 341.3 190 84.2
Lj4g0022669 Lotus japonicus HOM05D005644 ORTHO05D007092 6.4e-92 340.9 192 84.9
Atru.chr7.2312 Acer truncatum HOM05D005644 ORTHO05D007092 8.4e-92 340.5 188 84.6
Sp3g31700 Schrenkiella parvula HOM05D005644 ORTHO05D007092 8.4e-92 340.5 190 84.7
Hund21503 Selenicereus undatus HOM05D005644 ORTHO05D007092 1.1e-91 340.1 190 84.7
A06p33310 Brassica napus HOM05D005644 ORTHO05D007092 3.2e-91 338.6 190 84.2
C03p59070 Brassica napus HOM05D005644 ORTHO05D007092 3.2e-91 338.6 190 84.2
BolC3t18168H Brassica oleracea HOM05D005644 ORTHO05D007092 3.2e-91 338.6 190 84.2
Thhalv10022866m.g Eutrema salsugineum HOM05D005644 ORTHO05D007092 3.2e-91 338.6 190 84.2
Carub.0003s3246 Capsella rubella HOM05D005644 ORTHO05D007092 4.2e-91 338.2 190 83.7
BcaB08g34803 Brassica carinata HOM05D005644 ORTHO05D007092 5.4e-91 337.8 190 84.2
FvH4_1g13080 Fragaria vesca HOM05D005644 ORTHO05D007092 5.4e-91 337.8 192 84.4
HanXRQChr09g0261331 Helianthus annuus HOM05D005644 ORTHO05D007092 7.1e-91 337.4 190 85.8
Sc16g0002690 Simmondsia chinensis HOM05D005644 ORTHO05D007092 7.1e-91 337.4 190 85.3
Aqoxy6G01133 Aquilegia oxysepala HOM05D005644 ORTHO05D007092 1.2e-90 336.7 192 83.9
RcHm_v2.0_Chr2g0101251 Rosa chinensis HOM05D005644 ORTHO05D007092 2.1e-90 335.9 190 84.7
ClCG10G013900 Citrullus lanatus HOM05D005644 ORTHO05D007092 3.5e-90 335.1 216 76.4
EL10Ac4g07935 Beta vulgaris HOM05D005644 ORTHO05D007092 6.0e-90 334.3 190 83.7
ECA232G0363 Erigeron canadensis HOM05D005644 ORTHO05D007092 7.8e-90 334.0 190 83.7
THA.LOC104819776 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 1.0e-89 333.6 190 82.6
Glyma.02G055400 Glycine max HOM05D005644 ORTHO05D007092 2.3e-89 332.4 191 83.2
CANSAT01G2444 Cannabis sativa HOM05D005644 ORTHO05D007092 3.0e-89 332.0 190 82.6
FvH4_5g29620 Fragaria vesca HOM05D005644 ORTHO05D007092 3.0e-89 332.0 192 82.8
ATR0594G186 Amborella trichopoda HOM05D005644 ORTHO05D007092 6.6e-89 330.9 192 83.9
THA.LOC104804235 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 1.5e-88 329.7 190 82.6
MBI02_g12270_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.9e-88 329.3 207 78.3
PGR031G1764 Punica granatum HOM05D005644 ORTHO05D007092 1.9e-88 329.3 194 82.0
TPR.G24098 Trifolium pratense HOM05D005644 ORTHO05D007092 7.3e-88 327.4 230 71.3
Lsat_1_v5_gn_4_151201 Lactuca sativa HOM05D005644 ORTHO05D007092 1.3e-87 326.6 179 87.2
AUR62020530 Chenopodium quinoa HOM05D005644 ORTHO05D007092 6.2e-87 324.3 190 82.6
AUR62043224 Chenopodium quinoa HOM05D005644 ORTHO05D007092 6.2e-87 324.3 190 82.6
Rhsim11G0151400 Rhododendron simsii HOM05D005644 ORTHO05D007092 1.8e-86 322.8 244 69.3
Zm00001eb342630 Zea mays HOM05D005644 ORTHO05D007092 2.0e-85 319.3 177 84.2
Os05g0579800 Oryza sativa ssp. japonica HOM05D005644 ORTHO05D007092 5.8e-85 317.8 200 76.5
BraA06t26260Z Brassica rapa HOM05D005644 ORTHO05D007092 2.2e-84 315.8 196 79.1
CSS0024834 Camellia sinensis var. sinensis HOM05D005644 ORTHO05D007092 8.4e-84 313.9 164 92.1
PGR083G1765 Punica granatum HOM05D005644 ORTHO05D007092 8.4e-84 313.9 190 79.5
Nitab4.5_0000136g0330 Nicotiana tabacum HOM05D005644 ORTHO05D007092 1.1e-83 313.5 187 81.3
Nitab4.5_0005482g0020 Nicotiana tabacum HOM05D005644 ORTHO05D007092 5.4e-83 311.2 189 81.5
AUR62034193 Chenopodium quinoa HOM05D005644 ORTHO05D007092 1.2e-82 310.1 190 79.5
Peaxi162Scf00008g03525 Petunia axillaris HOM05D005644 ORTHO05D007092 4.6e-82 308.1 192 80.2
VMungo0251G3244 Vigna mungo HOM05D005644 ORTHO05D007092 4.6e-82 308.1 167 87.4
CDE04G3399 Ceratophyllum demersum HOM05D005644 ORTHO05D007092 1.0e-81 307.0 164 85.4
Zm00001eb294590 Zea mays HOM05D005644 ORTHO05D007092 1.9e-80 302.8 177 79.7
FAN19G1519 Fragaria x ananassa HOM05D005644 ORTHO05D007092 8.1e-79 297.4 177 81.9
Atru.chr3.600 Acer truncatum HOM05D005644 ORTHO05D007092 1.5e-77 293.1 190 72.6
Sabra05G0100200 Salix brachista HOM05D005644 ORTHO05D007092 4.2e-75 285.0 156 86.5
BolC7t40857H Brassica oleracea HOM05D005644 ORTHO05D007092 7.9e-74 280.8 189 72.5
FAN28G2376 Fragaria x ananassa HOM05D005644 ORTHO05D003509 2.1e-71 272.7 159 84.3
FAN23G1669 Fragaria x ananassa HOM05D005644 ORTHO05D007092 2.8e-71 272.3 160 83.8
SGA_v2.0_scaffold2G01321 Striga asiatica HOM05D005644 ORTHO05D007092 6.2e-71 271.2 192 75.0
FAN08G2945 Fragaria x ananassa HOM05D005644 ORTHO05D007092 5.3e-70 268.1 158 82.3
Hma1.2p1_0789F.1_g218290 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 6.0e-66 254.6 134 92.5
HPP92_023420 Vanilla planifolia HOM05D005644 ORTHO05D007092 3.9e-65 251.9 194 66.0
MBI08_g40822_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.5e-64 250.0 224 60.7
Cpa.g.sc6.131 Carica papaya HOM05D005644 ORTHO05D007092 4.3e-64 248.4 136 86.0
Mapoly0106s0034 Marchantia polymorpha HOM05D005644 ORTHO05D007092 7.4e-64 247.7 170 68.8
BcaC06g36396 Brassica carinata HOM05D005644 ORTHO05D007092 8.2e-63 244.2 164 72.0
Pp3c7_6320 Physcomitrium patens HOM05D005644 ORTHO05D007092 2.5e-59 232.6 191 59.2
SMO137G0236 Selaginella moellendorffii HOM05D005644 ORTHO05D007092 5.5e-59 231.5 170 63.5
AagrBONN_evm.TU.Sc2ySwM_362.2207 Anthoceros agrestis HOM05D005644 ORTHO05D007092 2.1e-58 229.6 173 61.8
FAN26G0781 Fragaria x ananassa HOM05D000577 ORTHO05D003509 2.7e-58 229.2 135 82.2
FAN18G2110 Fragaria x ananassa HOM05D005644 ORTHO05D007092 9.1e-54 214.2 168 65.5
CARHR108880 Cardamine hirsuta HOM05D005644 ORTHO05D007092 3.4e-53 212.2 112 88.4
MCO15G254 Micromonas commoda HOM05D005644 ORTHO05D007092 4.5e-53 211.8 178 56.7
PRCOL_00001837 Prasinoderma coloniale HOM05D005644 ORTHO05D007092 1.4e-49 200.3 166 59.6
SEGI_22782 Sequoiadendron giganteum HOM05D005644 ORTHO05D007092 2.5e-43 179.5 110 74.5
Haze_27504 Corylus avellana HOM05D005644 ORTHO05D007092 7.2e-43 177.9 142 56.3
Cre13.g571850 Chlamydomonas reinhardtii HOM05D005644 ORTHO05D007092 2.8e-39 166.0 144 52.1
CBR_g49399 Chara braunii HOM05D005644 ORTHO05D007092 2.4e-38 162.9 106 67.9
FAN13G0528 Fragaria x ananassa HOM05D005644 ORTHO05D007092 1.7e-31 140.2 168 48.8
DCAR_025950 Daucus carota HOM05D005644 ORTHO05D007092 4.1e-30 135.6 132 55.3
MBI02_g42708_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 6.5e-28 128.3 130 57.7
Hma1.2p1_2451F.1_g322360 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 1.5e-27 127.1 137 52.6
C07p04570 Brassica napus HOM05D005644 ORTHO05D007092 1.3e-23 114.0 126 48.4
MBI18_g01974_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.1e-22 110.9 71 71.8
MBI02_g23461_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 3.1e-22 109.4 214 38.3
MBI02_g17151_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 2.0e-21 106.7 130 49.2
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 6.6e-20 101.7 120 49.2
Hund21501 Selenicereus undatus HOM05D005644 ORTHO05D007092 1.4e-17 94.0 53 84.9
Hma1.2p1_0450F.1_g155660 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 2.0e-16 90.1 59 71.2
Ah.13g077660 Amaranthus hybridus HOM05D005644 ORTHO05D007092 3.7e-15 85.9 57 68.4
COL.COLO4_22055 Corchorus olitorius HOM05D005644 ORTHO05D007092 6.6e-12 75.1 47 76.6
MBI16_g04464_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 5.8e-08 62.0 105 40.0
Thecc.08G151500 Theobroma cacao HOM05D005644 ORTHO05D007092 1.3e-07 60.8 33 75.8
Dinv38404 Davidia involucrata HOM05D005644 ORTHO05D007092 3.2e-06 56.2 39 71.8


User provided reference genes

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