Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold448G51771 Striga asiatica HOM05D007351 ORTHO05D009386 8.1e-111 403.7 192 100.0
MSTRG.11754 Avicennia marina HOM05D007351 ORTHO05D009386 8.4e-92 340.5 193 85.0
Migut.A00300 Erythranthe guttata HOM05D007351 ORTHO05D009386 1.4e-91 339.7 193 86.5
Actinidia15698 Actinidia chinensis HOM05D007351 ORTHO05D009386 9.0e-86 320.5 182 85.2
CSS0046405 Camellia sinensis var. sinensis HOM05D007351 ORTHO05D009386 9.0e-86 320.5 189 83.6
MD08G1141900 Malus domestica HOM05D007351 ORTHO05D009386 1.7e-84 316.2 197 78.7
FvH4_2g29770 Fragaria vesca HOM05D007351 ORTHO05D009386 1.9e-83 312.8 183 82.5
GSVIVG01035772001 Vitis vinifera HOM05D007351 ORTHO05D009386 4.2e-83 311.6 190 82.6
Hma1.2p1_0000F.1_g000940 Hydrangea macrophylla HOM05D007351 ORTHO05D009386 1.2e-82 310.1 186 81.2
Lsat_1_v5_gn_6_21681 Lactuca sativa HOM05D007351 ORTHO05D009386 1.6e-82 309.7 180 82.2
FAN27G2935 Fragaria x ananassa HOM05D007351 ORTHO05D009386 2.1e-82 309.3 183 82.0
FAN24G0983 Fragaria x ananassa HOM05D007351 ORTHO05D009386 2.7e-82 308.9 183 82.0
Lj8A616G46 Lonicera japonica HOM05D007351 ORTHO05D009386 6.0e-82 307.8 190 80.0
Nn2g11909 Nelumbo nucifera HOM05D007351 ORTHO05D009386 6.0e-82 307.8 177 83.1
FAN15G3188 Fragaria x ananassa HOM05D007351 ORTHO05D009386 1.3e-81 306.6 183 81.4
HanXRQChr13g0402411 Helianthus annuus HOM05D007351 ORTHO05D009386 1.8e-81 306.2 191 78.0
Eucgr.C01805 Eucalyptus grandis HOM05D007351 ORTHO05D009386 2.3e-81 305.8 174 82.8
Manes.16G118400 Manihot esculenta HOM05D007351 ORTHO05D009386 3.0e-81 305.4 177 81.9
Prupe.1G471900 Prunus persica HOM05D007351 ORTHO05D009386 5.1e-81 304.7 177 81.9
RcHm_v2.0_Chr6g0298791 Rosa chinensis HOM05D007351 ORTHO05D009386 6.7e-81 304.3 176 83.0
CiPaw.08G014100 Carya illinoinensis HOM05D007351 ORTHO05D009386 8.7e-81 303.9 180 81.7
MBI04_g00950_MAGBIO Magnolia biondii HOM05D007351 ORTHO05D009386 8.7e-81 303.9 174 82.8
unitig_32.g11667 Utricularia gibba HOM05D007351 ORTHO05D009386 1.5e-80 303.1 184 79.9
Potri.006G249000 Populus trichocarpa HOM05D007351 ORTHO05D009386 2.5e-80 302.4 177 81.9
Sabra06G0194800 Salix brachista HOM05D007351 ORTHO05D009386 2.5e-80 302.4 177 81.9
TAR625G1337 Trochodendron aralioides HOM05D007351 ORTHO05D009386 3.3e-80 302.0 204 74.5
Ciclev10009550m.g Citrus clementina HOM05D007351 ORTHO05D009386 7.4e-80 300.8 174 80.5
Atru.chr7.2359 Acer truncatum HOM05D007351 ORTHO05D009386 2.8e-79 298.9 201 75.1
TWI34G1290 Tripterygium wilfordii HOM05D007351 ORTHO05D009386 2.8e-79 298.9 177 81.4
COL.COLO4_24001 Corchorus olitorius HOM05D007351 ORTHO05D009386 3.7e-79 298.5 171 81.3
ECA233G0102 Erigeron canadensis HOM05D007351 ORTHO05D009386 3.7e-79 298.5 194 74.7
arahy.Tifrunner.gnm1.ann1.C4YKET Arachis hypogaea HOM05D007351 ORTHO05D009386 6.2e-79 297.7 179 79.3
PGSC0003DMG400007382 Solanum tuberosum HOM05D007351 ORTHO05D009386 8.1e-79 297.4 191 78.0
PSO017G1621 Papaver somniferum HOM05D007351 ORTHO05D009386 1.4e-78 296.6 175 80.0
PSO170G0157 Papaver somniferum HOM05D007351 ORTHO05D009386 1.8e-78 296.2 175 79.4
Cc11_g01660 Coffea canephora HOM05D007351 ORTHO05D009386 2.4e-78 295.8 171 81.3
Nitab4.5_0000508g0220 Nicotiana tabacum HOM05D007351 ORTHO05D009386 2.4e-78 295.8 190 76.3
Thecc.09G147600 Theobroma cacao HOM05D007351 ORTHO05D009386 4.0e-78 295.0 171 80.1
BcaB06g28079 Brassica carinata HOM05D007351 ORTHO05D009386 5.3e-78 294.7 172 79.7
BcaC02g08337 Brassica carinata HOM05D007351 ORTHO05D009386 5.3e-78 294.7 172 79.7
A04p19820 Brassica napus HOM05D007351 ORTHO05D009386 5.3e-78 294.7 172 79.7
C04p55560 Brassica napus HOM05D007351 ORTHO05D009386 5.3e-78 294.7 172 79.7
BolC4t27080H Brassica oleracea HOM05D007351 ORTHO05D009386 5.3e-78 294.7 172 79.7
BraA04t17570Z Brassica rapa HOM05D007351 ORTHO05D009386 5.3e-78 294.7 172 79.7
AT2G25605 Arabidopsis thaliana HOM05D007351 ORTHO05D009386 9.0e-78 293.9 172 79.1
Peaxi162Scf00251g01128 Petunia axillaris HOM05D007351 ORTHO05D009386 9.0e-78 293.9 201 72.1
Glyma.06G071600 Glycine max HOM05D007351 ORTHO05D009386 1.2e-77 293.5 188 75.5
Lj1g0014043 Lotus japonicus HOM05D007351 ORTHO05D009386 1.2e-77 293.5 194 72.7
Solyc08g067430.4 Solanum lycopersicum HOM05D007351 ORTHO05D009386 1.2e-77 293.5 183 78.7
Rhsim07G0150700 Rhododendron simsii HOM05D007351 ORTHO05D009386 2.6e-77 292.4 202 75.2
Medtr3g107860 Medicago truncatula HOM05D007351 ORTHO05D009386 3.4e-77 292.0 185 74.6
THA.LOC104804500 Tarenaya hassleriana HOM05D007351 ORTHO05D009386 4.5e-77 291.6 170 80.6
Psat5g027160 Pisum sativum HOM05D007351 ORTHO05D009386 5.8e-77 291.2 185 74.6
CARHR115710 Cardamine hirsuta HOM05D007351 ORTHO05D009386 9.9e-77 290.4 170 79.4
EL10Ac2g02569 Beta vulgaris HOM05D007351 ORTHO05D009386 1.3e-76 290.0 176 80.7
Gorai.004G110800 Gossypium raimondii HOM05D007351 ORTHO05D009386 1.3e-76 290.0 171 78.4
Thhalv10000330m.g Eutrema salsugineum HOM05D007351 ORTHO05D009386 2.2e-76 289.3 170 78.8
Lalb_Chr23g0268831 Lupinus albus HOM05D007351 ORTHO05D009386 2.9e-76 288.9 174 78.7
Carub.0004s0533 Capsella rubella HOM05D007351 ORTHO05D009386 3.8e-76 288.5 170 78.8
Phvul.009G096100 Phaseolus vulgaris HOM05D007351 ORTHO05D009386 4.9e-76 288.1 194 72.7
Aqoxy7G02003 Aquilegia oxysepala HOM05D007351 ORTHO05D009386 6.4e-76 287.7 196 74.0
Ca_15711_v3 Cicer arietinum L. HOM05D007351 ORTHO05D009386 6.4e-76 287.7 169 79.3
Glyma.04G069700 Glycine max HOM05D007351 ORTHO05D009386 6.4e-76 287.7 174 78.2
Cpa.g.sc91.32 Carica papaya HOM05D007351 ORTHO05D009386 8.4e-76 287.3 201 71.6
vmacro05202 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 1.9e-75 286.2 157 88.5
AL4G17070 Arabidopsis lyrata HOM05D007351 ORTHO05D009386 3.2e-75 285.4 183 73.8
arahy.Tifrunner.gnm1.ann1.8MNE4Q Arachis hypogaea HOM05D007351 ORTHO05D009386 4.2e-75 285.0 200 70.5
Gohir.A08G090000 Gossypium hirsutum HOM05D007351 ORTHO05D009386 5.5e-75 284.6 169 78.1
Sopen08g021360 Solanum pennellii HOM05D007351 ORTHO05D009386 5.5e-75 284.6 183 77.0
Sc06g0000580 Simmondsia chinensis HOM05D007351 ORTHO05D009386 7.1e-75 284.3 176 77.8
Hund03010 Selenicereus undatus HOM05D007351 ORTHO05D009386 9.3e-75 283.9 178 77.5
Aa31sc586G10 Aethionema arabicum HOM05D007351 ORTHO05D009386 1.2e-74 283.5 170 77.1
AUR62032351 Chenopodium quinoa HOM05D007351 ORTHO05D009386 2.7e-74 282.3 187 75.4
Nitab4.5_0002339g0070 Nicotiana tabacum HOM05D007351 ORTHO05D009386 1.0e-73 280.4 193 73.1
Os05g0574700 Oryza sativa ssp. japonica HOM05D007351 ORTHO05D009386 1.3e-73 280.0 175 77.1
TPR.G27335 Trifolium pratense HOM05D007351 ORTHO05D009386 1.3e-73 280.0 187 72.2
CDE06G1133 Ceratophyllum demersum HOM05D007351 ORTHO05D009386 1.1e-72 276.9 194 73.7
MELO3C003678.2 Cucumis melo HOM05D007351 ORTHO05D009386 7.4e-72 274.2 189 68.8
Sed0005695 Sechium edule HOM05D007351 ORTHO05D009386 9.6e-72 273.9 186 69.9
ATR0680G179 Amborella trichopoda HOM05D007351 ORTHO05D009386 2.8e-71 272.3 189 72.0
VMungo1309G2796 Vigna mungo HOM05D007351 ORTHO05D009386 1.2e-66 256.9 205 65.9
AUR62041846 Chenopodium quinoa HOM05D007351 ORTHO05D009386 1.6e-66 256.5 168 75.6
DCAR_003046 Daucus carota HOM05D007351 ORTHO05D009386 1.3e-63 246.9 173 74.0
SEGI_27006 Sequoiadendron giganteum HOM05D007351 ORTHO05D009386 8.2e-63 244.2 170 65.9
QL12p031742 Quercus lobata HOM05D007351 ORTHO05D009386 2.4e-62 242.7 149 79.9
Sp4g05090 Schrenkiella parvula HOM05D007351 ORTHO05D009386 6.9e-62 241.1 141 78.7
Oeu045191.1 Olea europaea HOM05D007351 ORTHO05D009386 9.0e-62 240.7 202 65.3
Duzib150G1343 Durio zibethinus HOM05D007351 ORTHO05D009386 2.0e-61 239.6 142 80.3
CsaV3_3G046600 Cucumis sativus L. HOM05D007351 ORTHO05D009386 2.6e-61 239.2 145 75.2
Mapoly0036s0071 Marchantia polymorpha HOM05D007351 ORTHO05D009386 2.6e-61 239.2 171 64.3
PGR031G1798 Punica granatum HOM05D007351 ORTHO05D009386 3.4e-61 238.8 143 81.8
Gohir.D08G102800 Gossypium hirsutum HOM05D007351 ORTHO05D009386 5.9e-61 238.0 146 78.1
CANSAT11G2455 Cannabis sativa HOM05D007351 ORTHO05D009386 5.5e-59 231.5 181 65.2
Zm00001eb344390 Zea mays HOM05D007351 ORTHO05D009386 2.7e-58 229.2 148 73.0
SMO269G0024 Selaginella moellendorffii HOM05D007351 ORTHO05D009386 6.7e-57 224.6 167 62.3
Pp3c17_16830 Physcomitrium patens HOM05D007351 ORTHO05D009386 5.7e-56 221.5 171 60.8
AagrBONN_evm.TU.Sc2ySwM_228.1243 Anthoceros agrestis HOM05D007351 ORTHO05D009386 1.8e-54 216.5 156 67.3
Haze_21592 Corylus avellana HOM05D007351 ORTHO05D009386 6.5e-52 208.0 115 83.5
CBR_g40414 Chara braunii HOM05D007351 ORTHO05D009386 6.5e-44 181.4 156 55.8
CANSAT54G2502 Cannabis sativa HOM05D007351 ORTHO05D009386 6.1e-42 174.9 152 61.2
Cre17.g746897 Chlamydomonas reinhardtii HOM05D007351 ORTHO05D009386 3.5e-29 132.5 144 45.8
vmacro05206 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 1.9e-19 100.1 165 41.2
Lsat_1_v5_gn_4_127141 Lactuca sativa HOM05D007351 ORTHO05D009386 2.5e-11 73.2 40 77.5
Pp3c16_22900 Physcomitrium patens HOM05D033550 ORTHO05D017832 3.3e-11 72.8 151 33.1
SMO356G0017 Selaginella moellendorffii HOM05D007351 ORTHO05D017832 3.2e-06 56.2 175 30.3


User provided reference genes

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