Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold447G51756 Striga asiatica HOM05D005197 ORTHO05D006263 9.0e-90 333.6 169 100.0
MSTRG.13922 Avicennia marina HOM05D005197 ORTHO05D006263 1.4e-18 97.1 189 39.7
SalBow8G0134 Salvia bowleyana HOM05D005197 ORTHO05D006263 1.2e-17 94.0 203 38.4
Migut.E01390 Erythranthe guttata HOM05D005197 ORTHO05D006263 3.0e-16 89.4 177 39.5
Oeu057151.1 Olea europaea HOM05D005197 ORTHO05D006263 1.6e-14 83.6 199 39.7
unitig_748.g8157 Utricularia gibba HOM05D000246 ORTHO05D007958 2.8e-14 82.8 169 37.3
SalBow2G1093 Salvia bowleyana HOM05D005197 ORTHO05D006263 8.9e-13 77.8 88 53.4
SalBow2G3639 Salvia bowleyana HOM05D002402 ORTHO05D002633 1.5e-12 77.0 90 51.1
SalBow7G0563 Salvia bowleyana HOM05D005197 ORTHO05D006263 2.6e-12 76.3 88 52.3
CAN.G22.3 Capsicum annuum HOM05D005197 ORTHO05D006263 5.8e-12 75.1 169 38.5
SGA_v2.0_scaffold121G33048 Striga asiatica HOM05D005197 ORTHO05D006263 7.5e-12 74.7 181 34.3
SalBow6G4547 Salvia bowleyana HOM05D005197 ORTHO05D006263 9.9e-12 74.3 80 53.8
Sopen07g029250 Solanum pennellii HOM05D005197 ORTHO05D006263 1.7e-11 73.6 188 34.6
Phvul.002G124900 Phaseolus vulgaris HOM05D005197 ORTHO05D006263 2.9e-11 72.8 176 33.5
SalBow6G3245 Salvia bowleyana HOM05D005197 ORTHO05D006263 3.7e-11 72.4 84 54.8
Psat2g143520 Pisum sativum HOM05D005197 ORTHO05D006263 9.2e-10 67.8 199 30.7
Peaxi162Scf00445g00001 Petunia axillaris HOM05D005197 ORTHO05D006263 3.5e-09 65.9 170 38.8
SalBow8G0427 Salvia bowleyana HOM05D005197 ORTHO05D006263 4.6e-09 65.5 174 37.4
Glyma.01G150900 Glycine max HOM05D005197 ORTHO05D006263 6.0e-09 65.1 155 33.5
Lsat_1_v5_gn_6_15401 Lactuca sativa HOM05D005197 ORTHO05D006263 1.7e-08 63.5 66 59.1
Lalb_Chr16g0380581 Lupinus albus HOM05D005197 ORTHO05D006263 2.3e-08 63.2 162 31.5
Atru.chr6.2120 Acer truncatum HOM05D005197 ORTHO05D006263 3.9e-08 62.4 199 33.2
AL1G49590 Arabidopsis lyrata HOM05D005197 ORTHO05D006263 3.9e-08 62.4 127 37.0
VMungo1215G2329 Vigna mungo HOM05D005197 ORTHO05D006263 6.6e-08 61.6 176 32.4
CARHR023710 Cardamine hirsuta HOM05D005197 ORTHO05D006263 8.6e-08 61.2 169 32.5
QL12p002187 Quercus lobata HOM05D005197 ORTHO05D006263 8.6e-08 61.2 150 34.0
vmacro19764 Vaccinium macrocarpon HOM05D005197 ORTHO05D006263 8.6e-08 61.2 112 43.8
Ah.12g056120 Amaranthus hybridus HOM05D005197 ORTHO05D006263 1.1e-07 60.8 197 30.5
FAN04G2949 Fragaria x ananassa HOM05D005197 ORTHO05D006263 1.1e-07 60.8 70 50.0
Aa31LG9G15880 Aethionema arabicum HOM05D005197 ORTHO05D006263 1.5e-07 60.5 153 35.3
TAR629G2553 Trochodendron aralioides HOM05D005197 ORTHO05D006263 1.5e-07 60.5 204 32.8
AT1G31460 Arabidopsis thaliana HOM05D005197 ORTHO05D006263 1.9e-07 60.1 153 35.9
EL10Ac5g11882 Beta vulgaris HOM05D005197 ORTHO05D006263 1.9e-07 60.1 69 52.2
Carub.0001s2988 Capsella rubella HOM05D005197 ORTHO05D006263 1.9e-07 60.1 107 42.1
Manes.17G005300 Manihot esculenta HOM05D005197 ORTHO05D006263 1.9e-07 60.1 190 31.1
Actinidia25714 Actinidia chinensis HOM05D005197 ORTHO05D006263 2.5e-07 59.7 95 43.2
Cc00_g01150 Coffea canephora HOM05D005197 ORTHO05D006263 2.5e-07 59.7 53 54.7
AUR62027297 Chenopodium quinoa HOM05D005197 ORTHO05D006263 3.3e-07 59.3 100 38.0
Rhsim05G0122600 Rhododendron simsii HOM05D005197 ORTHO05D006263 3.3e-07 59.3 174 31.6
CARHR030980 Cardamine hirsuta HOM05D005197 ORTHO05D006263 4.3e-07 58.9 107 41.1
CiPaw.10G109500 Carya illinoinensis HOM05D005197 ORTHO05D006263 4.3e-07 58.9 171 35.1
Ca_25075_v3 Cicer arietinum L. HOM05D005197 ORTHO05D006263 4.3e-07 58.9 88 39.8
Nitab4.5_0000183g0040 Nicotiana tabacum HOM05D005197 ORTHO05D006263 4.3e-07 58.9 61 57.4
Dinv09432 Davidia involucrata HOM05D005197 ORTHO05D002665 5.6e-07 58.5 149 36.2
Thhalv10009724m.g Eutrema salsugineum HOM05D005197 ORTHO05D006263 7.3e-07 58.2 152 34.9
PGR042G3936 Punica granatum HOM05D005197 ORTHO05D006263 7.3e-07 58.2 69 50.7
FvH4_5g24380 Fragaria vesca HOM05D005197 ORTHO05D006263 9.5e-07 57.8 70 51.4
FAN08G2611 Fragaria x ananassa HOM05D005197 ORTHO05D006263 9.5e-07 57.8 70 50.0
FAN13G2818 Fragaria x ananassa HOM05D005197 ORTHO05D006263 9.5e-07 57.8 70 51.4
FAN18G1897 Fragaria x ananassa HOM05D005197 ORTHO05D006263 9.5e-07 57.8 70 51.4
Sp1g27260 Schrenkiella parvula HOM05D005197 ORTHO05D006263 1.2e-06 57.4 63 55.6
COL.COLO4_16714 Corchorus olitorius HOM05D005197 ORTHO05D006263 1.6e-06 57.0 54 53.7
CsaV3_4G006970 Cucumis sativus L. HOM05D005197 ORTHO05D006263 1.6e-06 57.0 211 30.3
ECA232G2780 Erigeron canadensis HOM05D005197 ORTHO05D006263 1.6e-06 57.0 96 43.8
Nitab4.5_0004181g0010 Nicotiana tabacum HOM05D005197 ORTHO05D006263 1.6e-06 57.0 76 48.7
BcaB07g32316 Brassica carinata HOM05D005197 ORTHO05D006263 2.1e-06 56.6 96 43.8
BcaC05g26236 Brassica carinata HOM05D005197 ORTHO05D006263 2.1e-06 56.6 47 61.7
A09p41500 Brassica napus HOM05D005197 ORTHO05D006263 2.1e-06 56.6 54 59.3
BolC5t30946H Brassica oleracea HOM05D005197 ORTHO05D006263 2.1e-06 56.6 47 61.7
BraA09t39642Z Brassica rapa HOM05D005197 ORTHO05D006263 2.1e-06 56.6 54 59.3
Eucgr.E01174 Eucalyptus grandis HOM05D005197 ORTHO05D006263 2.1e-06 56.6 172 34.3
Thhalv10008233m.g Eutrema salsugineum HOM05D005197 ORTHO05D006263 2.1e-06 56.6 107 43.9
MD16G1288300 Malus domestica HOM05D005197 ORTHO05D006263 2.8e-06 56.2 69 46.4
ECA233G2979 Erigeron canadensis HOM05D005197 ORTHO05D006263 3.6e-06 55.8 67 50.7
Nn1g09229 Nelumbo nucifera HOM05D005197 ORTHO05D006263 3.6e-06 55.8 202 27.2
AUR62022385 Chenopodium quinoa HOM05D005197 ORTHO05D006263 4.7e-06 55.5 90 40.0
DCAR_030955 Daucus carota HOM05D005197 ORTHO05D006263 6.2e-06 55.1 177 29.9
Medtr5g026390 Medicago truncatula HOM05D005197 ORTHO05D006263 6.2e-06 55.1 153 28.8
Sed0006364 Sechium edule HOM05D005197 ORTHO05D006263 6.2e-06 55.1 57 54.4
C05p22480 Brassica napus HOM05D005197 ORTHO05D006263 8.1e-06 54.7 105 40.0
ClCG07G011270 Citrullus lanatus HOM05D005197 ORTHO05D006263 8.1e-06 54.7 57 54.4
TWI32G0688 Tripterygium wilfordii HOM05D005197 ORTHO05D006263 8.1e-06 54.7 47 57.4
TWI60G1368 Tripterygium wilfordii HOM05D005197 ORTHO05D006263 8.1e-06 54.7 52 53.8


User provided reference genes

Program Settings