Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold446G51734 Striga asiatica HOM05D003789 ORTHO05D004158 4.5e-53 211.1 113 100.0
SGA_v2.0_scaffold31G12661 Striga asiatica HOM05D003789 ORTHO05D004158 5.9e-37 157.5 88 93.2
MSTRG.4146 Avicennia marina HOM05D003789 ORTHO05D004158 5.6e-19 97.8 109 56.0
Oeu005086.1 Olea europaea HOM05D003789 ORTHO05D004158 5.8e-16 87.8 88 59.1
SGA_v2.0_scaffold43G16218 Striga asiatica HOM05D003789 ORTHO05D004158 2.2e-15 85.9 88 59.1
Oeu059161.1 Olea europaea HOM05D003789 ORTHO05D004158 5.4e-14 81.3 89 53.9
Migut.G00503 Erythranthe guttata HOM05D003789 ORTHO05D004158 6.6e-12 74.3 92 54.3
CAN.G220.37 Capsicum annuum HOM05D003789 ORTHO05D004158 1.9e-11 72.8 93 47.3
unitig_746.g26888 Utricularia gibba HOM05D003789 ORTHO05D004158 4.3e-11 71.6 88 53.4
Actinidia35800 Actinidia chinensis HOM05D003789 ORTHO05D004158 2.8e-10 68.9 95 49.5
Actinidia20820 Actinidia chinensis HOM05D003789 ORTHO05D004158 3.6e-10 68.6 95 49.5
Peaxi162Scf00392g00731 Petunia axillaris HOM05D003789 ORTHO05D004158 4.0e-09 65.1 111 45.0
Hma1.2p1_0385F.1_g141250 Hydrangea macrophylla HOM05D003789 ORTHO05D004158 5.2e-09 64.7 88 51.1
CSS0032833 Camellia sinensis var. sinensis HOM05D003789 ORTHO05D004158 6.8e-09 64.3 87 48.3
Dinv27071 Davidia involucrata HOM05D003789 ORTHO05D004158 8.9e-09 63.9 120 40.8
PGSC0003DMG400017165 Solanum tuberosum HOM05D003789 ORTHO05D004158 1.2e-08 63.5 99 43.4
Actinidia11355 Actinidia chinensis HOM05D003789 ORTHO05D004158 2.0e-08 62.8 99 43.4
Oeu002941.1 Olea europaea HOM05D003789 ORTHO05D004158 2.0e-08 62.8 83 53.0
Gohir.A02G040800 Gossypium hirsutum HOM05D003789 ORTHO05D004158 2.6e-08 62.4 84 50.0
Gorai.005G051200 Gossypium raimondii HOM05D003789 ORTHO05D004158 2.6e-08 62.4 84 50.0
Dinv29841 Davidia involucrata HOM05D003789 ORTHO05D004158 3.4e-08 62.0 97 43.3
Duzib151G1033 Durio zibethinus HOM05D003789 ORTHO05D004158 3.4e-08 62.0 83 49.4
PGSC0003DMG400013454 Solanum tuberosum HOM05D003789 ORTHO05D004158 3.4e-08 62.0 81 48.1
HanXRQChr02g0059181 Helianthus annuus HOM05D003789 ORTHO05D004158 5.8e-08 61.2 98 41.8
Sopen09g033220 Solanum pennellii HOM05D003789 ORTHO05D004158 5.8e-08 61.2 99 42.4
Solyc03g005620.4 Solanum lycopersicum HOM05D003789 ORTHO05D004158 1.3e-07 60.1 80 48.8
Lsat_1_v5_gn_6_63340 Lactuca sativa HOM05D003789 ORTHO05D004158 1.7e-07 59.7 88 46.6
Potri.008G169000 Populus trichocarpa HOM05D003789 ORTHO05D004158 1.7e-07 59.7 99 40.4
Lalb_Chr02g0150271 Lupinus albus HOM05D003789 ORTHO05D004158 2.2e-07 59.3 89 41.6
Rhsim04G0176400 Rhododendron simsii HOM05D003789 ORTHO05D004158 2.2e-07 59.3 89 49.4
Gohir.D02G046400 Gossypium hirsutum HOM05D003789 ORTHO05D004158 2.9e-07 58.9 84 47.6
vmacro08512 Vaccinium macrocarpon HOM05D003789 ORTHO05D004158 2.9e-07 58.9 96 44.8
HPP92_012912 Vanilla planifolia HOM05D003789 ORTHO05D004158 2.9e-07 58.9 77 40.3
Nitab4.5_0000044g0510 Nicotiana tabacum HOM05D003789 ORTHO05D004158 3.7e-07 58.5 95 47.4
Sabra08G0128800 Salix brachista HOM05D003789 ORTHO05D004158 3.7e-07 58.5 99 40.4
Glyma.20G207200 Glycine max HOM05D003789 ORTHO05D004158 4.9e-07 58.2 89 42.7
GSVIVG01027850001 Vitis vinifera HOM05D003789 ORTHO05D004158 4.9e-07 58.2 112 41.1
CiPaw.01G181800 Carya illinoinensis HOM05D003789 ORTHO05D004158 1.1e-06 57.0 89 43.8
Eucgr.H03019 Eucalyptus grandis HOM05D003789 ORTHO05D004158 1.1e-06 57.0 95 42.1
Sp7g12360 Schrenkiella parvula HOM05D003789 ORTHO05D004158 1.1e-06 57.0 71 45.1
Sopen03g001620 Solanum pennellii HOM05D003789 ORTHO05D004158 1.1e-06 57.0 91 42.9
Lalb_Chr21g0312151 Lupinus albus HOM05D003789 ORTHO05D004158 1.4e-06 56.6 94 39.4
MD16G1221700 Malus domestica HOM05D003789 ORTHO05D004158 1.4e-06 56.6 94 44.7
CAN.G638.43 Capsicum annuum HOM05D003789 ORTHO05D004158 1.9e-06 56.2 77 48.1
Nn3g19718 Nelumbo nucifera HOM05D003789 ORTHO05D004158 1.9e-06 56.2 91 42.9
CDE12G0940 Ceratophyllum demersum HOM05D003789 ORTHO05D004158 3.2e-06 55.5 85 43.5
DCAR_027329 Daucus carota HOM05D003789 ORTHO05D004158 4.1e-06 55.1 85 47.1
Prupe.1G042100 Prunus persica HOM05D003789 ORTHO05D004158 4.1e-06 55.1 94 44.7
Solyc09g090320.2 Solanum lycopersicum HOM05D003789 ORTHO05D004158 4.1e-06 55.1 118 37.3
Cpa.g.sc44.37 Carica papaya HOM05D003789 ORTHO05D004158 7.1e-06 54.3 94 40.4
Cfa014741 Carpinus fangiana HOM05D003789 ORTHO05D004158 7.1e-06 54.3 88 42.0
Haze_11416 Corylus avellana HOM05D003789 ORTHO05D004158 7.1e-06 54.3 88 42.0
BcaC02g09326 Brassica carinata HOM05D003789 ORTHO05D004158 9.2e-06 53.9 72 44.4
C04p41390 Brassica napus HOM05D003789 ORTHO05D004158 9.2e-06 53.9 72 44.4
BolC4t25718H Brassica oleracea HOM05D003789 ORTHO05D004158 9.2e-06 53.9 72 44.4
Phvul.010G069638 Phaseolus vulgaris HOM05D003789 ORTHO05D004158 9.2e-06 53.9 93 40.9


User provided reference genes

Program Settings