Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold440G51663 Striga asiatica HOM05D000965 ORTHO05D400036 5.4e-67 257.7 144 100.0
SGA_v2.0_scaffold1G00001 Striga asiatica HOM05D000965 ORTHO05D001798 1.1e-22 110.5 92 69.6
Migut.M01072 Erythranthe guttata HOM05D000965 ORTHO05D000842 2.3e-17 92.8 103 56.3
MSTRG.7384 Avicennia marina HOM05D000965 ORTHO05D000842 1.9e-16 89.7 103 54.4
MSTRG.13212 Avicennia marina HOM05D000965 ORTHO05D000842 1.1e-14 84.0 101 52.5
Oeu045070.1 Olea europaea HOM05D000965 ORTHO05D000842 1.5e-13 80.1 102 51.0
SalBow8G2663 Salvia bowleyana HOM05D000965 ORTHO05D000842 3.4e-13 79.0 85 56.5
FAN16G2308 Fragaria x ananassa HOM05D000965 ORTHO05D000842 3.5e-10 68.9 103 39.8
Migut.H01457 Erythranthe guttata HOM05D000965 ORTHO05D000842 1.8e-09 66.6 106 43.4
FvH4_3g08181 Fragaria vesca HOM05D000965 ORTHO05D000842 2.3e-09 66.2 103 37.9
FAN11G0316 Fragaria x ananassa HOM05D000965 ORTHO05D000842 2.3e-09 66.2 103 37.9
Lj1A1197T77 Lonicera japonica HOM05D000965 ORTHO05D000842 5.1e-09 65.1 103 38.8
CiPaw.10G056100 Carya illinoinensis HOM05D000965 ORTHO05D000842 1.5e-08 63.5 96 34.4
CiPaw.10G056400 Carya illinoinensis HOM05D000965 ORTHO05D000842 1.9e-08 63.2 96 34.4
GSVIVG01021164001 Vitis vinifera HOM05D000965 ORTHO05D000842 1.9e-08 63.2 102 34.3
FAN21G4029 Fragaria x ananassa HOM05D000965 ORTHO05D000842 2.5e-08 62.8 103 35.9
Lj1A1197T76 Lonicera japonica HOM05D000965 ORTHO05D000842 3.3e-08 62.4 102 35.3
FAN25G0952 Fragaria x ananassa HOM05D000965 ORTHO05D000842 5.6e-08 61.6 97 37.1
Prupe.4G056800 Prunus persica HOM05D000965 ORTHO05D000842 1.6e-07 60.1 102 37.3
SalBow7G2542 Salvia bowleyana HOM05D000965 ORTHO05D000842 1.6e-07 60.1 103 40.8
SalBow7G4367 Salvia bowleyana HOM05D000965 ORTHO05D000842 1.6e-07 60.1 103 40.8
TAR626G0308 Trochodendron aralioides HOM05D000965 ORTHO05D000842 2.1e-07 59.7 107 32.7
Nn1g04327 Nelumbo nucifera HOM05D000965 ORTHO05D000842 3.7e-07 58.9 104 34.6
RcHm_v2.0_Chr5g0010001 Rosa chinensis HOM05D000965 ORTHO05D000842 4.8e-07 58.5 102 35.3
Potri.001G375400 Populus trichocarpa HOM05D000965 ORTHO05D000842 8.1e-07 57.8 102 33.3
Potri.001G375300 Populus trichocarpa HOM05D000965 ORTHO05D000842 1.1e-06 57.4 75 38.7
DCAR_028028 Daucus carota HOM05D000965 ORTHO05D000842 2.4e-06 56.2 72 43.1
Dinv40644 Davidia involucrata HOM05D000965 ORTHO05D000842 3.1e-06 55.8 102 30.4
Thecc.07G103200 Theobroma cacao HOM05D000965 ORTHO05D000842 3.1e-06 55.8 112 33.0
Atru.chr10.1736 Acer truncatum HOM05D000113 ORTHO05D001798 4.0e-06 55.5 47 53.2
HanXRQChr04g0116791 Helianthus annuus HOM05D000965 ORTHO05D000842 4.0e-06 55.5 45 55.6
DCAR_028027 Daucus carota HOM05D000965 ORTHO05D000842 5.3e-06 55.1 72 43.1
Rhsim02G0139100 Rhododendron simsii HOM05D000965 ORTHO05D000842 5.3e-06 55.1 99 31.3
Aqoxy1G02200 Aquilegia oxysepala HOM05D000965 ORTHO05D000842 6.9e-06 54.7 102 36.3
Actinidia23658 Actinidia chinensis HOM05D000965 ORTHO05D000842 9.0e-06 54.3 102 31.4
unitig_578.g16442 Utricularia gibba HOM05D000965 ORTHO05D000842 9.0e-06 54.3 103 35.9
HPP92_000589 Vanilla planifolia HOM05D000965 ORTHO05D000842 9.0e-06 54.3 106 34.9


User provided reference genes

Program Settings