Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold43G16517 Striga asiatica HOM05D006638 ORTHO05D008246 1.2e-129 466.5 237 100.0
MSTRG.4914 Avicennia marina HOM05D006638 ORTHO05D008246 6.5e-86 321.2 236 70.8
Migut.N01611 Erythranthe guttata HOM05D006638 ORTHO05D008246 1.8e-83 313.2 239 68.2
SalBow1G6174 Salvia bowleyana HOM05D006638 ORTHO05D008246 2.0e-82 309.7 236 70.3
Rhsim05G0215700 Rhododendron simsii HOM05D006638 ORTHO05D008246 2.5e-77 292.7 228 67.5
Hma1.2p1_0001F.1_g001240 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 1.6e-76 290.0 210 68.6
unitig_748.g7114 Utricularia gibba HOM05D006638 ORTHO05D008246 2.1e-76 289.7 205 70.2
Dinv44116 Davidia involucrata HOM05D006638 ORTHO05D008246 6.1e-76 288.1 236 65.7
TAR636G0703 Trochodendron aralioides HOM05D006638 ORTHO05D008246 3.9e-75 285.4 237 64.1
Nn2g12739 Nelumbo nucifera HOM05D006638 ORTHO05D008246 6.7e-75 284.6 223 66.8
Lj7A537T49 Lonicera japonica HOM05D006638 ORTHO05D008246 5.7e-74 281.6 237 65.8
Haze_02520 Corylus avellana HOM05D006638 ORTHO05D008246 3.7e-73 278.9 206 67.0
Atru.chr5.234 Acer truncatum HOM05D006638 ORTHO05D008246 1.1e-72 277.3 222 64.9
Prupe.2G137100 Prunus persica HOM05D006638 ORTHO05D008246 1.1e-72 277.3 207 67.1
GSVIVG01018156001 Vitis vinifera HOM05D006638 ORTHO05D008246 1.8e-72 276.6 235 63.8
CANSAT56G0739 Cannabis sativa HOM05D006638 ORTHO05D008246 7.0e-72 274.6 222 65.3
Potri.004G225600 Populus trichocarpa HOM05D006638 ORTHO05D008246 7.0e-72 274.6 185 72.4
Sabra01G0171300 Salix brachista HOM05D006638 ORTHO05D008246 7.0e-72 274.6 185 71.9
Glyma.03G033200 Glycine max HOM05D006638 ORTHO05D008246 1.2e-71 273.9 184 71.2
QL04p037061 Quercus lobata HOM05D006638 ORTHO05D008246 2.0e-71 273.1 229 61.1
Aqoxy7G00747 Aquilegia oxysepala HOM05D006638 ORTHO05D008246 2.6e-71 272.7 184 72.3
PSO170G5140 Papaver somniferum HOM05D006638 ORTHO05D008246 5.9e-71 271.6 182 73.6
DCAR_029874 Daucus carota HOM05D006638 ORTHO05D008246 1.0e-70 270.8 184 72.8
Sc23g0003780 Simmondsia chinensis HOM05D006638 ORTHO05D008246 1.3e-70 270.4 216 65.7
arahy.Tifrunner.gnm1.ann1.WQW1G6 Arachis hypogaea HOM05D006638 ORTHO05D008246 1.7e-70 270.0 183 69.4
COL.COLO4_12484 Corchorus olitorius HOM05D006638 ORTHO05D008246 1.7e-70 270.0 228 61.0
Lalb_Chr07g0190301 Lupinus albus HOM05D006638 ORTHO05D008246 1.7e-70 270.0 184 71.2
FvH4_7g11040 Fragaria vesca HOM05D006638 ORTHO05D008246 2.9e-70 269.2 202 66.8
Lj3g0022109 Lotus japonicus HOM05D006638 ORTHO05D008246 3.8e-70 268.9 184 66.8
Eucgr.H00160 Eucalyptus grandis HOM05D006638 ORTHO05D008246 6.5e-70 268.1 182 74.2
CiPaw.14G025400 Carya illinoinensis HOM05D006638 ORTHO05D008246 8.5e-70 267.7 184 70.1
FAN06G4764 Fragaria x ananassa HOM05D006638 ORTHO05D008246 8.5e-70 267.7 220 60.9
EL10Ac1g00836 Beta vulgaris HOM05D006638 ORTHO05D008246 1.1e-69 267.3 227 63.0
Thecc.01G384300 Theobroma cacao HOM05D006638 ORTHO05D008246 1.5e-69 266.9 234 61.5
CAN.G1872.5 Capsicum annuum HOM05D006638 ORTHO05D008246 1.9e-69 266.5 210 66.7
Ca_19858_v3 Cicer arietinum L. HOM05D006638 ORTHO05D008246 2.5e-69 266.2 184 67.4
CsaV3_3G007360 Cucumis sativus L. HOM05D006638 ORTHO05D008246 2.5e-69 266.2 225 61.3
Hund17047 Selenicereus undatus HOM05D006638 ORTHO05D008246 2.5e-69 266.2 187 69.5
FAN10G2039 Fragaria x ananassa HOM05D006638 ORTHO05D008246 3.2e-69 265.8 229 61.6
Cpa.g.sc49.148 Carica papaya HOM05D006638 ORTHO05D008246 4.2e-69 265.4 235 60.4
FAN10G1288 Fragaria x ananassa HOM05D006638 ORTHO05D008246 4.2e-69 265.4 229 61.6
RcHm_v2.0_Chr1g0349031 Rosa chinensis HOM05D006638 ORTHO05D008246 4.2e-69 265.4 184 69.6
FAN03G2254 Fragaria x ananassa HOM05D006638 ORTHO05D008246 5.5e-69 265.0 229 59.4
Nitab4.5_0011151g0010 Nicotiana tabacum HOM05D006638 ORTHO05D008246 5.5e-69 265.0 184 70.7
Psat0s3685g0120 Pisum sativum HOM05D006638 ORTHO05D008246 1.2e-68 263.8 218 61.0
Solyc01g090880.3 Solanum lycopersicum HOM05D006638 ORTHO05D008246 1.2e-68 263.8 229 62.0
ClCG05G000210 Citrullus lanatus HOM05D006638 ORTHO05D008246 1.6e-68 263.5 180 71.1
Sopen01g036620 Solanum pennellii HOM05D006638 ORTHO05D008246 1.6e-68 263.5 203 65.5
PGSC0003DMG400025975 Solanum tuberosum HOM05D006638 ORTHO05D008246 1.6e-68 263.5 205 63.4
arahy.Tifrunner.gnm1.ann1.B645Y9 Arachis hypogaea HOM05D006638 ORTHO05D008246 2.7e-68 262.7 234 58.1
Atru.BG.68.p Acer truncatum HOM05D006638 ORTHO05D008246 3.6e-68 262.3 175 75.4
Duzib133G1291 Durio zibethinus HOM05D006638 ORTHO05D008246 6.1e-68 261.5 232 60.8
ECA234G0121 Erigeron canadensis HOM05D006638 ORTHO05D008246 6.1e-68 261.5 179 71.5
MD07G1114500 Malus domestica HOM05D006638 ORTHO05D008246 1.0e-67 260.8 226 61.1
Nitab4.5_0000859g0190 Nicotiana tabacum HOM05D006638 ORTHO05D008246 1.4e-67 260.4 184 70.1
HanXRQChr12g0384211 Helianthus annuus HOM05D006638 ORTHO05D008246 4.0e-67 258.8 204 63.7
TWI23G0519 Tripterygium wilfordii HOM05D006638 ORTHO05D008246 4.0e-67 258.8 228 61.4
Gorai.008G106400 Gossypium raimondii HOM05D006638 ORTHO05D008246 2.0e-66 256.5 237 57.8
BcaC07g42567 Brassica carinata HOM05D006638 ORTHO05D008246 3.4e-66 255.8 183 68.3
THA.LOC104809455 Tarenaya hassleriana HOM05D006638 ORTHO05D008246 5.7e-66 255.0 228 60.1
BraA09t41748Z Brassica rapa HOM05D006638 ORTHO05D008246 1.3e-65 253.8 235 57.9
Gohir.A12G095100 Gossypium hirsutum HOM05D006638 ORTHO05D008246 1.3e-65 253.8 237 57.8
Aa31LG1G2420 Aethionema arabicum HOM05D006638 ORTHO05D008246 1.7e-65 253.4 184 65.8
Medtr4g027430 Medicago truncatula HOM05D006638 ORTHO05D008246 2.2e-65 253.1 217 59.0
PGR142G0596 Punica granatum HOM05D006638 ORTHO05D008246 2.2e-65 253.1 268 53.4
C08p47510 Brassica napus HOM05D006638 ORTHO05D008246 2.8e-65 252.7 183 66.7
Lsat_1_v5_gn_4_45501 Lactuca sativa HOM05D006638 ORTHO05D008246 2.8e-65 252.7 215 63.3
BcaC07g41715 Brassica carinata HOM05D006638 ORTHO05D008246 4.8e-65 251.9 183 66.1
AL1G23530 Arabidopsis lyrata HOM05D006638 ORTHO05D008246 6.3e-65 251.5 211 59.7
CDE02G4315 Ceratophyllum demersum HOM05D000218 ORTHO05D000125 6.3e-65 251.5 172 73.3
Lj1g0022300 Lotus japonicus HOM05D006638 ORTHO05D008246 8.3e-65 251.1 191 63.4
Thhalv10008640m.g Eutrema salsugineum HOM05D006638 ORTHO05D008246 1.1e-64 250.8 211 59.2
Ciclev10023836m.g Citrus clementina HOM05D006638 ORTHO05D008246 1.4e-64 250.4 195 66.7
AT1G12244 Arabidopsis thaliana HOM05D006638 ORTHO05D008246 1.8e-64 250.0 192 62.5
BolC8t52292H Brassica oleracea HOM05D006638 ORTHO05D008246 1.8e-64 250.0 183 66.1
Carub.0001s1192 Capsella rubella HOM05D006638 ORTHO05D008246 2.4e-64 249.6 211 59.2
CARHR012550 Cardamine hirsuta HOM05D006638 ORTHO05D008246 7.0e-64 248.1 200 62.0
Cc02_g24450 Coffea canephora HOM05D006638 ORTHO05D008246 9.1e-64 247.7 220 60.9
TAR629G0886 Trochodendron aralioides HOM05D006638 ORTHO05D008246 7.2e-61 238.0 236 56.8
VMungo0331G0589 Vigna mungo HOM05D006638 ORTHO05D008246 9.4e-61 237.7 184 63.0
HPP92_022319 Vanilla planifolia HOM05D006638 ORTHO05D008246 2.0e-58 229.9 174 66.7
Peaxi162Scf00803g00218 Petunia axillaris HOM05D006638 ORTHO05D008246 5.7e-58 228.4 184 62.5
HPP92_022327 Vanilla planifolia HOM05D006638 ORTHO05D008246 2.2e-57 226.5 174 65.5
MELO3C005958.2 Cucumis melo HOM05D006638 ORTHO05D008246 2.0e-55 219.9 276 45.7
Actinidia33482 Actinidia chinensis HOM05D006638 ORTHO05D008246 9.5e-53 211.1 184 62.0
CSS0044007 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 3.6e-52 209.1 234 53.4
Sp1g10860 Schrenkiella parvula HOM05D006638 ORTHO05D008246 6.1e-52 208.4 183 58.5
CSS0019813 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 8.0e-52 208.0 230 52.6
Os10g0555200 Oryza sativa ssp. japonica HOM05D006638 ORTHO05D008246 4.4e-50 202.2 197 58.4
Phvul.010G071600 Phaseolus vulgaris HOM05D006638 ORTHO05D008246 4.4e-50 202.2 125 76.0
Manes.17G011000 Manihot esculenta HOM05D006638 ORTHO05D008246 9.8e-50 201.1 175 64.0
ATR0317G113 Amborella trichopoda HOM05D006638 ORTHO05D008246 2.2e-49 199.9 167 63.5
Ah.01g003990 Amaranthus hybridus HOM05D006638 ORTHO05D008246 1.1e-48 197.6 139 73.4
MBI04_g09497_MAGBIO Magnolia biondii HOM05D006638 ORTHO05D008246 1.2e-47 194.1 187 57.8
Gohir.D12G097700 Gossypium hirsutum HOM05D006638 ORTHO05D008246 1.7e-46 190.3 178 59.6
Sed0019776 Sechium edule HOM05D006638 ORTHO05D008246 2.9e-46 189.5 145 64.1
Hma1.2p1_0001F.1_g001250 Hydrangea macrophylla HOM05D006638 ORTHO05D008246 1.6e-44 183.7 119 76.5
TPR.G27556 Trifolium pratense HOM05D006638 ORTHO05D008246 1.6e-44 183.7 125 69.6
vmacro21035 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 2.8e-44 183.0 122 75.4
Zm00001eb023510 Zea mays HOM05D006638 ORTHO05D008246 1.2e-42 177.6 163 62.0
Oeu000021.1 Olea europaea HOM05D006638 ORTHO05D008246 1.1e-40 171.0 118 75.4
AagrBONN_evm.TU.Sc2ySwM_228.3890 Anthoceros agrestis HOM05D006638 ORTHO05D008246 1.6e-39 167.2 190 48.4
Mapoly0010s0011 Marchantia polymorpha HOM05D006638 ORTHO05D008246 6.0e-39 165.2 155 55.5
CSS0006996 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 3.0e-38 162.9 149 63.1
Pp3c1_23680 Physcomitrium patens HOM05D006638 ORTHO05D008246 8.0e-36 154.8 158 50.6
CSS0041268 Camellia sinensis var. sinensis HOM05D006638 ORTHO05D008246 5.2e-35 152.1 149 61.1
Rhsim01G0151400 Rhododendron simsii HOM05D006638 ORTHO05D008246 1.2e-34 151.0 103 71.8
Medtr2g064690 Medicago truncatula HOM05D006638 ORTHO05D008246 2.6e-34 149.8 128 60.9
FAN01G0965 Fragaria x ananassa HOM05D006638 ORTHO05D008246 3.5e-31 139.4 98 73.5
SMO340G0150 Selaginella moellendorffii HOM05D006638 ORTHO05D008246 1.1e-27 127.9 170 45.9
TPR.G4994 Trifolium pratense HOM05D006954 ORTHO05D008246 5.4e-24 115.5 90 61.1
Pp3c1_23620 Physcomitrium patens HOM05D006638 ORTHO05D008246 1.0e-22 111.3 135 45.9
CBR_g17705 Chara braunii HOM05D006638 ORTHO05D008246 7.8e-15 85.1 165 35.2
vmacro21034 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 8.7e-14 81.6 72 56.9
Lsat_1_v5_gn_6_51920 Lactuca sativa HOM05D006638 ORTHO05D008246 5.6e-13 79.0 56 67.9
Medtr2g064700 Medicago truncatula HOM05D006638 ORTHO05D008246 2.1e-12 77.0 46 65.2
MELO3C033920.2 Cucumis melo HOM05D006638 ORTHO05D008246 1.3e-09 67.8 101 43.6
Lsat_1_v5_gn_1_125220 Lactuca sativa HOM05D006638 ORTHO05D008246 3.2e-08 63.2 89 46.1
RcHm_v2.0_Chr1g0349061 Rosa chinensis HOM05D006638 ORTHO05D008246 9.3e-08 61.6 42 64.3
Solyc12g035620.2 Solanum lycopersicum HOM05D006638 ORTHO05D008246 1.2e-07 61.2 46 56.5
Medtr2g064670 Medicago truncatula HOM05D006638 ORTHO05D008246 2.7e-07 60.1 37 59.5


User provided reference genes

Program Settings