Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold43G16514 Striga asiatica HOM05D006574 ORTHO05D008210 5.3e-116 421.0 209 100.0
Ciclev10021078m.g Citrus clementina HOM05D006574 ORTHO05D008210 3.6e-72 275.4 209 64.6
MSTRG.4912 Avicennia marina HOM05D006574 ORTHO05D008210 6.1e-72 274.6 206 64.1
Migut.L01604 Erythranthe guttata HOM05D006574 ORTHO05D008210 6.1e-72 274.6 194 71.1
Migut.N01615 Erythranthe guttata HOM05D006574 ORTHO05D008210 6.1e-72 274.6 194 71.1
DCAR_015883 Daucus carota HOM05D006574 ORTHO05D008210 1.5e-70 270.0 205 64.4
HanXRQChr03g0093261 Helianthus annuus HOM05D006574 ORTHO05D008210 5.8e-70 268.1 209 64.6
QL04p038697 Quercus lobata HOM05D006574 ORTHO05D008210 9.8e-70 267.3 193 66.3
Lj3g0024356 Lotus japonicus HOM05D006574 ORTHO05D008210 4.9e-69 265.0 200 64.0
ECA240G1589 Erigeron canadensis HOM05D006574 ORTHO05D008210 1.1e-68 263.8 193 66.8
GSVIVG01027684001 Vitis vinifera HOM05D006574 ORTHO05D008210 1.4e-68 263.5 196 65.3
Cfa011166 Carpinus fangiana HOM05D006574 ORTHO05D008210 1.9e-68 263.1 209 62.2
COL.COLO4_12488 Corchorus olitorius HOM05D006574 ORTHO05D008210 1.9e-68 263.1 209 63.2
Cc02_g24430 Coffea canephora HOM05D006574 ORTHO05D008210 2.4e-68 262.7 198 67.7
Lj7P535T34 Lonicera japonica HOM05D006574 ORTHO05D008210 2.4e-68 262.7 209 65.6
MD07G1115500 Malus domestica HOM05D006574 ORTHO05D008210 3.2e-68 262.3 193 65.3
Phvul.010G072300 Phaseolus vulgaris HOM05D006574 ORTHO05D008210 3.2e-68 262.3 209 61.7
Thecc.01G382800 Theobroma cacao HOM05D006574 ORTHO05D008210 4.1e-68 261.9 209 63.2
Dinv43672 Davidia involucrata HOM05D006574 ORTHO05D008210 5.4e-68 261.5 193 66.3
Manes.05G049100 Manihot esculenta HOM05D006574 ORTHO05D008210 7.0e-68 261.2 199 62.8
VMungo0331G0612 Vigna mungo HOM05D006574 ORTHO05D008210 7.0e-68 261.2 207 61.8
Duzib138G0195 Durio zibethinus HOM05D006574 ORTHO05D008210 9.2e-68 260.8 209 62.7
Hma1.2p1_0386F.1_g141830 Hydrangea macrophylla HOM05D006574 ORTHO05D008210 9.2e-68 260.8 193 66.3
Sabra14G0044800 Salix brachista HOM05D006574 ORTHO05D008210 9.2e-68 260.8 193 63.7
Glyma.03G032200 Glycine max HOM05D006574 ORTHO05D008210 1.2e-67 260.4 193 64.8
CSS0016139 Camellia sinensis var. sinensis HOM05D006574 ORTHO05D008210 1.6e-67 260.0 193 66.3
CSS0019673 Camellia sinensis var. sinensis HOM05D006574 ORTHO05D008210 1.6e-67 260.0 193 66.3
FvH4_7g11080 Fragaria vesca HOM05D006574 ORTHO05D008210 1.6e-67 260.0 198 64.6
FAN06G2171 Fragaria x ananassa HOM05D006574 ORTHO05D008210 1.6e-67 260.0 198 64.6
FAN06G3094 Fragaria x ananassa HOM05D006574 ORTHO05D008210 1.6e-67 260.0 198 64.6
PGSC0003DMG400026016 Solanum tuberosum HOM05D006574 ORTHO05D008210 2.7e-67 259.2 198 62.6
CiPaw.13G032400 Carya illinoinensis HOM05D006574 ORTHO05D008210 3.5e-67 258.8 199 62.8
FAN01G0938 Fragaria x ananassa HOM05D006574 ORTHO05D008210 4.6e-67 258.5 198 64.1
FAN03G3328 Fragaria x ananassa HOM05D006574 ORTHO05D008210 4.6e-67 258.5 198 64.1
Glyma.01G135900 Glycine max HOM05D006574 ORTHO05D008210 4.6e-67 258.5 207 60.9
RcHm_v2.0_Chr1g0349101 Rosa chinensis HOM05D006574 ORTHO05D008210 4.6e-67 258.5 198 64.6
Gorai.007G088900 Gossypium raimondii HOM05D006574 ORTHO05D008210 6.0e-67 258.1 199 62.8
Solyc01g090900.3 Solanum lycopersicum HOM05D006574 ORTHO05D008210 6.0e-67 258.1 198 62.6
Sopen01g036640 Solanum pennellii HOM05D006574 ORTHO05D008210 6.0e-67 258.1 198 62.6
Gohir.A11G078700 Gossypium hirsutum HOM05D006574 ORTHO05D008210 1.3e-66 256.9 209 61.2
Oeu000020.1 Olea europaea HOM05D006574 ORTHO05D008210 1.3e-66 256.9 208 62.0
Potri.014G061000 Populus trichocarpa HOM05D006574 ORTHO05D008210 1.3e-66 256.9 193 63.2
Prupe.2G138000 Prunus persica HOM05D006574 ORTHO05D008210 1.3e-66 256.9 193 63.7
arahy.Tifrunner.gnm1.ann1.KNQ922 Arachis hypogaea HOM05D006574 ORTHO05D008210 1.7e-66 256.5 198 61.6
Gohir.D11G083300 Gossypium hirsutum HOM05D006574 ORTHO05D008210 1.7e-66 256.5 199 62.8
Nitab4.5_0008963g0020 Nicotiana tabacum HOM05D006574 ORTHO05D008210 1.7e-66 256.5 198 62.6
MELO3C005473.2 Cucumis melo HOM05D006574 ORTHO05D008210 2.3e-66 256.1 194 63.4
FAN10G1171 Fragaria x ananassa HOM05D006574 ORTHO05D008210 2.3e-66 256.1 198 63.1
Nitab4.5_0000859g0210 Nicotiana tabacum HOM05D006574 ORTHO05D008210 2.3e-66 256.1 198 62.1
Peaxi162Scf00803g00013 Petunia axillaris HOM05D006574 ORTHO05D008210 2.3e-66 256.1 198 62.1
CANSAT56G0701 Cannabis sativa HOM05D006574 ORTHO05D008210 3.0e-66 255.8 193 65.3
CANSAT56G2026 Cannabis sativa HOM05D006574 ORTHO05D008210 3.0e-66 255.8 193 65.3
ClCG00G005790 Citrullus lanatus HOM05D006574 ORTHO05D008210 3.0e-66 255.8 206 61.7
CAN.G1872.8 Capsicum annuum HOM05D006574 ORTHO05D008210 3.9e-66 255.4 199 61.8
FAN10G3734 Fragaria x ananassa HOM05D006574 ORTHO05D008210 5.0e-66 255.0 198 63.1
HanXRQChr13g0423061 Helianthus annuus HOM05D006574 ORTHO05D008210 1.1e-65 253.8 196 64.8
Ca_19840_v3 Cicer arietinum L. HOM05D006574 ORTHO05D008210 1.9e-65 253.1 193 64.2
Lalb_Chr07g0190251 Lupinus albus HOM05D006574 ORTHO05D008210 2.5e-65 252.7 198 61.6
vmacro13444 Vaccinium macrocarpon HOM05D006574 ORTHO05D008210 2.5e-65 252.7 193 64.8
vmacro22438 Vaccinium macrocarpon HOM05D006574 ORTHO05D008210 2.5e-65 252.7 193 64.8
Sed0000081 Sechium edule HOM05D006574 ORTHO05D008210 4.3e-65 251.9 206 60.2
unitig_8.g3385 Utricularia gibba HOM05D006574 ORTHO05D008210 4.3e-65 251.9 200 62.5
CsaV3_5G004680 Cucumis sativus L. HOM05D006574 ORTHO05D008210 9.5e-65 250.8 194 62.4
TPR.G4993 Trifolium pratense HOM05D006574 ORTHO05D008210 1.6e-64 250.0 193 63.2
Psat7g236040 Pisum sativum HOM05D006574 ORTHO05D008210 2.8e-64 249.2 193 62.7
Rhsim07G0031300 Rhododendron simsii HOM05D006574 ORTHO05D008210 2.8e-64 249.2 193 64.2
Lsat_1_v5_gn_3_129181 Lactuca sativa HOM05D006574 ORTHO05D008210 3.6e-64 248.8 193 63.7
Lalb_Chr12g0207901 Lupinus albus HOM05D006574 ORTHO05D008210 3.6e-64 248.8 198 61.6
Medtr4g027070 Medicago truncatula HOM05D006574 ORTHO05D008210 3.6e-64 248.8 193 62.7
THA.LOC104817218 Tarenaya hassleriana HOM05D006574 ORTHO05D008210 3.6e-64 248.8 198 60.6
TWI59G0788 Tripterygium wilfordii HOM05D006574 ORTHO05D008210 8.0e-64 247.7 206 59.2
Nn6g33974 Nelumbo nucifera HOM05D006574 ORTHO05D008210 1.4e-63 246.9 193 62.2
Cpa.g.sc129.21 Carica papaya HOM05D006574 ORTHO05D008210 1.2e-62 243.8 193 61.7
Aa31LG10G14870 Aethionema arabicum HOM05D006574 ORTHO05D008210 1.5e-62 243.4 203 60.1
TAR374G0842 Trochodendron aralioides HOM05D006574 ORTHO05D008210 1.5e-62 243.4 193 61.7
BcaB02g08163 Brassica carinata HOM05D006574 ORTHO05D008210 5.8e-62 241.5 206 58.7
A04p01560 Brassica napus HOM05D006574 ORTHO05D008210 7.5e-62 241.1 194 61.9
C08p35540 Brassica napus HOM05D006574 ORTHO05D008210 7.5e-62 241.1 194 61.9
BraA04t15877Z Brassica rapa HOM05D006574 ORTHO05D008210 7.5e-62 241.1 194 61.9
PGR004G2311 Punica granatum HOM05D006574 ORTHO05D008210 7.5e-62 241.1 192 62.0
Ah.05g173830 Amaranthus hybridus HOM05D006574 ORTHO05D008210 9.8e-62 240.7 193 60.1
Sc02g0002790 Simmondsia chinensis HOM05D006574 ORTHO05D008210 1.3e-61 240.4 198 59.6
BcaC02g10162 Brassica carinata HOM05D006574 ORTHO05D008210 2.2e-61 239.6 194 61.9
C04p32070 Brassica napus HOM05D006574 ORTHO05D008210 2.2e-61 239.6 194 61.9
BolC4t24760H Brassica oleracea HOM05D006574 ORTHO05D008210 2.2e-61 239.6 194 61.9
BolC8t51146H Brassica oleracea HOM05D006574 ORTHO05D008210 2.2e-61 239.6 194 61.9
BraA09t40713Z Brassica rapa HOM05D006574 ORTHO05D008210 3.7e-61 238.8 194 61.3
A09p52810 Brassica napus HOM05D006574 ORTHO05D008210 4.9e-61 238.4 194 60.8
Gorai.004G163900 Gossypium raimondii HOM05D006574 ORTHO05D008210 4.9e-61 238.4 193 61.7
EL10Ac1g00838 Beta vulgaris HOM05D006574 ORTHO05D008210 1.1e-60 237.3 198 58.1
Sp5g02640 Schrenkiella parvula HOM05D006574 ORTHO05D008210 1.1e-60 237.3 194 60.8
Gohir.A08G136900 Gossypium hirsutum HOM05D006574 ORTHO05D008210 1.4e-60 236.9 193 60.6
Gohir.D08G157700 Gossypium hirsutum HOM05D006574 ORTHO05D008210 1.4e-60 236.9 193 61.1
Carub.0005s2733 Capsella rubella HOM05D006574 ORTHO05D008210 1.9e-60 236.5 194 60.8
Thhalv10006432m.g Eutrema salsugineum HOM05D006574 ORTHO05D008210 1.9e-60 236.5 194 60.8
CARHR171000 Cardamine hirsuta HOM05D006574 ORTHO05D008210 2.4e-60 236.1 194 60.3
AUR62004165 Chenopodium quinoa HOM05D006574 ORTHO05D008210 4.1e-60 235.3 193 59.6
AUR62013662 Chenopodium quinoa HOM05D006574 ORTHO05D008210 5.4e-60 235.0 193 59.6
Aqoxy5G03888 Aquilegia oxysepala HOM05D006574 ORTHO05D008210 9.2e-60 234.2 193 60.6
AT3G60590 Arabidopsis thaliana HOM05D006574 ORTHO05D008210 9.2e-60 234.2 194 59.8
Eucgr.D02492 Eucalyptus grandis HOM05D006574 ORTHO05D008210 9.2e-60 234.2 201 59.7
Os04g0534500 Oryza sativa ssp. japonica HOM05D006574 ORTHO05D008210 2.7e-59 232.6 190 62.1
PSO063G4205 Papaver somniferum HOM05D006574 ORTHO05D008210 1.2e-56 223.8 191 58.1
PSO782G0696 Papaver somniferum HOM05D006574 ORTHO05D008210 2.8e-56 222.6 191 58.1
ATR0317G043 Amborella trichopoda HOM05D006574 ORTHO05D008210 8.1e-56 221.1 191 58.6
HanXRQChr13g0422971 Helianthus annuus HOM05D006574 ORTHO05D008210 2.0e-54 216.5 182 59.9
HPP92_027018 Vanilla planifolia HOM05D006574 ORTHO05D008210 1.3e-53 213.8 190 55.8
Actinidia22763 Actinidia chinensis HOM05D006574 ORTHO05D008210 1.1e-52 210.7 173 63.0
CDE12G0059 Ceratophyllum demersum HOM05D006574 ORTHO05D008210 1.7e-50 203.4 176 60.8
AagrBONN_evm.TU.Sc2ySwM_117.2636 Anthoceros agrestis HOM05D006574 ORTHO05D008210 1.6e-43 180.3 194 46.4
SEGI_22327 Sequoiadendron giganteum HOM05D006574 ORTHO05D008210 6.0e-43 178.3 189 49.2
TAR374G1600 Trochodendron aralioides HOM05D006574 ORTHO05D008210 3.1e-39 166.0 162 53.1
HanXRQChr13g0422981 Helianthus annuus HOM05D006574 ORTHO05D008210 1.0e-34 151.0 196 44.9
Mapoly0010s0201 Marchantia polymorpha HOM05D006574 ORTHO05D008210 1.7e-34 150.2 196 44.9
Actinidia22819 Actinidia chinensis HOM05D006574 ORTHO05D008210 3.4e-22 109.4 96 60.4
HPP92_027026 Vanilla planifolia HOM05D006574 ORTHO05D008210 2.5e-17 93.2 69 60.9
Atru.chr5.248 Acer truncatum HOM05D006574 ORTHO05D008210 1.1e-12 77.8 64 59.4
vmacro22439 Vaccinium macrocarpon HOM05D006574 ORTHO05D008210 1.4e-12 77.4 57 61.4
Zm00001eb427440 Zea mays HOM05D006574 ORTHO05D008210 5.1e-10 68.9 46 69.6
AagrBONN_evm.TU.Sc2ySwM_344.2339 Anthoceros agrestis HOM05D025526 ORTHO05D023512 1.3e-08 64.3 185 28.6
AagrBONN_evm.TU.Sc2ySwM_228.2830 Anthoceros agrestis HOM05D025526 ORTHO05D023512 1.4e-07 60.8 193 29.0
PGSC0003DMG400005293 Solanum tuberosum HOM05D003072 ORTHO05D008464 2.4e-07 60.1 153 32.7
CAN.G22.19 Capsicum annuum HOM05D003072 ORTHO05D008464 4.1e-07 59.3 153 32.0
Migut.O00122 Erythranthe guttata HOM05D003072 ORTHO05D008464 5.3e-07 58.9 157 31.2
Thecc.03G018600 Theobroma cacao HOM05D003072 ORTHO05D008464 1.5e-06 57.4 154 30.5
Nitab4.5_0000025g0470 Nicotiana tabacum HOM05D003072 ORTHO05D008464 2.0e-06 57.0 153 30.7
ECA247G2325 Erigeron canadensis HOM05D003072 ORTHO05D008464 2.6e-06 56.6 154 29.9
Lalb_Chr23g0273311 Lupinus albus HOM05D003072 ORTHO05D008464 2.6e-06 56.6 155 31.6
Pp3c26_14540 Physcomitrium patens HOM05D025526 ORTHO05D023512 2.6e-06 56.6 189 27.0
Lsat_1_v5_gn_1_28241 Lactuca sativa HOM05D003072 ORTHO05D008464 3.4e-06 56.2 169 29.0
Nitab4.5_0014195g0010 Nicotiana tabacum HOM05D003072 ORTHO05D008464 3.4e-06 56.2 153 30.7
Mapoly0088s0089 Marchantia polymorpha HOM05D025526 ORTHO05D023512 4.5e-06 55.8 195 28.2
COL.COLO4_30098 Corchorus olitorius HOM05D003072 ORTHO05D008464 7.7e-06 55.1 154 31.2
Dinv38563 Davidia involucrata HOM05D003072 ORTHO05D008464 7.7e-06 55.1 156 30.8
Pp3c21_4590 Physcomitrium patens HOM05D003072 ORTHO05D008464 7.7e-06 55.1 161 32.3
TAR629G1829 Trochodendron aralioides HOM05D003072 ORTHO05D008464 7.7e-06 55.1 159 28.9


User provided reference genes

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