Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold43G16471 Striga asiatica HOM05D004961 ORTHO05D006258 3.4e-272 941.0 469 100.0
SGA_v2.0_scaffold11G05589 Striga asiatica HOM05D004961 ORTHO05D006258 4.6e-144 515.4 629 49.8
SalBow5G3969 Salvia bowleyana HOM05D004961 ORTHO05D006258 4.1e-124 449.1 629 44.2
SalBow5G5559 Salvia bowleyana HOM05D004961 ORTHO05D006258 4.1e-124 449.1 629 44.2
Oeu005782.1 Olea europaea HOM05D004961 ORTHO05D006258 1.5e-113 414.1 583 44.4
Migut.B01640 Erythranthe guttata HOM05D004961 ORTHO05D006258 2.5e-113 413.3 639 40.2
Oeu037913.2 Olea europaea HOM05D004961 ORTHO05D006258 2.3e-111 406.8 570 44.7
Migut.N01639 Erythranthe guttata HOM05D004961 ORTHO05D006258 2.0e-110 403.7 602 42.5
Oeu003482.1 Olea europaea HOM05D004961 ORTHO05D006258 3.5e-99 366.3 580 41.2
Cc02_g36640 Coffea canephora HOM05D004961 ORTHO05D006258 7.8e-91 338.6 634 36.4
Gohir.A11G081100 Gossypium hirsutum HOM05D004961 ORTHO05D006258 5.0e-90 335.9 634 35.8
Gorai.007G091500 Gossypium raimondii HOM05D004961 ORTHO05D006258 1.1e-89 334.7 634 35.8
Gohir.D11G085600 Gossypium hirsutum HOM05D004961 ORTHO05D006258 2.5e-89 333.6 634 35.6
Haze_16810 Corylus avellana HOM05D004961 ORTHO05D006258 1.5e-86 324.3 630 35.7
Thecc.01G375500 Theobroma cacao HOM05D004961 ORTHO05D006258 2.2e-85 320.5 635 34.5
CANSAT56G2246 Cannabis sativa HOM05D004961 ORTHO05D006258 2.9e-85 320.1 644 33.7
Manes.05G044700 Manihot esculenta HOM05D004961 ORTHO05D006258 3.7e-85 319.7 618 34.6
Cfa001712 Carpinus fangiana HOM05D004961 ORTHO05D006258 4.9e-85 319.3 640 35.5
Lalb_Chr13g0291711 Lupinus albus HOM05D004961 ORTHO05D006258 4.9e-85 319.3 630 34.4
CSS0024555 Camellia sinensis var. sinensis HOM05D004961 ORTHO05D006258 9.2e-84 315.1 554 35.9
COL.COLO4_12554 Corchorus olitorius HOM05D004961 ORTHO05D006258 9.2e-84 315.1 553 35.6
Prupe.2G146400 Prunus persica HOM05D004961 ORTHO05D006258 2.1e-83 313.9 563 35.2
QL08p052244 Quercus lobata HOM05D004961 ORTHO05D006258 1.0e-82 311.6 619 35.1
MD07G1123000 Malus domestica HOM05D004961 ORTHO05D006258 2.3e-82 310.5 632 34.0
RcHm_v2.0_Chr1g0350691 Rosa chinensis HOM05D004961 ORTHO05D006258 2.3e-82 310.5 546 35.2
Hma1.2p1_0033F.1_g021010 Hydrangea macrophylla HOM05D004961 ORTHO05D006258 3.0e-82 310.1 619 34.7
Hma1.2p1_2294F.1_g319110 Hydrangea macrophylla HOM05D004961 ORTHO05D006258 3.0e-82 310.1 619 34.7
TAR629G2710 Trochodendron aralioides HOM05D004961 ORTHO05D006258 3.9e-82 309.7 625 35.2
Ca_23848_v3 Cicer arietinum L. HOM05D004961 ORTHO05D006258 8.6e-82 308.5 584 35.1
TWI59G0003 Tripterygium wilfordii HOM05D004961 ORTHO05D006258 8.6e-82 308.5 624 34.0
CiPaw.01G261500 Carya illinoinensis HOM05D004961 ORTHO05D006258 1.5e-81 307.8 640 35.2
MD02G1203100 Malus domestica HOM05D004961 ORTHO05D006258 1.5e-81 307.8 544 35.1
PGR031G0429 Punica granatum HOM05D004961 ORTHO05D006258 3.3e-81 306.6 565 34.3
TWI14G0737 Tripterygium wilfordii HOM05D004961 ORTHO05D006258 4.3e-81 306.2 622 33.8
vmacro13395 Vaccinium macrocarpon HOM05D004961 ORTHO05D006258 7.3e-81 305.4 623 33.7
FAN03G2819 Fragaria x ananassa HOM05D004961 ORTHO05D006258 9.5e-81 305.1 610 34.1
Ciclev10019247m.g Citrus clementina HOM05D004961 ORTHO05D006258 2.1e-80 303.9 611 35.0
Nitab4.5_0005372g0040 Nicotiana tabacum HOM05D004961 ORTHO05D006258 2.1e-80 303.9 544 36.9
Dinv43717 Davidia involucrata HOM05D004961 ORTHO05D006258 4.7e-80 302.8 533 37.1
Medtr8g036115 Medicago truncatula HOM05D004961 ORTHO05D006258 4.7e-80 302.8 639 33.6
TAR375G0417 Trochodendron aralioides HOM05D004961 ORTHO05D006258 8.1e-80 302.0 553 35.4
Nn4g26417 Nelumbo nucifera HOM05D004961 ORTHO05D006258 1.1e-79 301.6 554 35.4
Duzib133G1444 Durio zibethinus HOM05D004961 ORTHO05D006258 1.4e-79 301.2 621 33.5
FAN06G1287 Fragaria x ananassa HOM05D004961 ORTHO05D006258 1.8e-79 300.8 624 33.5
Sabra14G0049800 Salix brachista HOM05D004961 ORTHO05D006258 1.8e-79 300.8 633 33.8
CAN.G388.8 Capsicum annuum HOM05D004961 ORTHO05D006258 2.3e-79 300.4 543 36.8
FvH4_7g11970 Fragaria vesca HOM05D004961 ORTHO05D006258 2.3e-79 300.4 610 33.8
FAN10G1405 Fragaria x ananassa HOM05D004961 ORTHO05D006258 2.3e-79 300.4 610 33.8
CiPaw.02G167000 Carya illinoinensis HOM05D004961 ORTHO05D006258 5.2e-79 299.3 620 34.0
FAN01G0106 Fragaria x ananassa HOM05D004961 ORTHO05D006258 6.8e-79 298.9 624 33.2
FAN06G1099 Fragaria x ananassa HOM05D004961 ORTHO05D006258 6.8e-79 298.9 610 33.6
Rhsim07G0027200 Rhododendron simsii HOM05D004961 ORTHO05D006258 6.8e-79 298.9 596 34.1
TPR.G21740 Trifolium pratense HOM05D004961 ORTHO05D006258 2.0e-78 297.4 557 34.8
Gorai.004G041000 Gossypium raimondii HOM05D004961 ORTHO05D006258 2.6e-78 297.0 620 33.9
Lj3g0023798 Lotus japonicus HOM05D004961 ORTHO05D006258 3.4e-78 296.6 554 35.6
Atru.chr5.317 Acer truncatum HOM05D004961 ORTHO05D006258 7.6e-78 295.4 552 35.3
PGSC0003DMG400012758 Solanum tuberosum HOM05D004961 ORTHO05D006258 7.6e-78 295.4 547 36.0
Aqoxy7G00605 Aquilegia oxysepala HOM05D004961 ORTHO05D006258 1.3e-77 294.7 556 34.9
Solyc01g091390.2 Solanum lycopersicum HOM05D004961 ORTHO05D006258 1.3e-77 294.7 547 36.0
Sopen01g037160 Solanum pennellii HOM05D004961 ORTHO05D006258 1.3e-77 294.7 547 36.0
Gohir.D08G042400 Gossypium hirsutum HOM05D004961 ORTHO05D006258 1.7e-77 294.3 620 33.7
Lalb_Chr07g0189751 Lupinus albus HOM05D004961 ORTHO05D006258 1.7e-77 294.3 538 37.0
FAN10G1351 Fragaria x ananassa HOM05D004961 ORTHO05D006258 2.2e-77 293.9 610 33.4
Nitab4.5_0000457g0390 Nicotiana tabacum HOM05D004961 ORTHO05D006258 3.7e-77 293.1 631 34.1
Gohir.A08G031300 Gossypium hirsutum HOM05D004961 ORTHO05D006258 6.4e-77 292.4 620 33.5
CSS0035955 Camellia sinensis var. sinensis HOM05D004961 ORTHO05D006258 1.1e-76 291.6 635 33.1
Potri.014G070200 Populus trichocarpa HOM05D004961 ORTHO05D006258 1.4e-76 291.2 629 32.9
Thhalv10005830m.g Eutrema salsugineum HOM05D004961 ORTHO05D006258 7.1e-76 288.9 623 33.5
MELO3C006184.2 Cucumis melo HOM05D004961 ORTHO05D006258 3.5e-75 286.6 629 32.6
Sed0003746 Sechium edule HOM05D004961 ORTHO05D006258 3.5e-75 286.6 615 32.5
CsaV3_3G009640 Cucumis sativus L. HOM05D004961 ORTHO05D006258 4.6e-75 286.2 629 32.6
Sp5g02400 Schrenkiella parvula HOM05D004961 ORTHO05D006258 2.3e-74 283.9 630 32.5
Actinidia12261 Actinidia chinensis HOM05D004961 ORTHO05D006258 5.1e-74 282.7 553 35.8
Phvul.010G084800 Phaseolus vulgaris HOM05D004961 ORTHO05D006258 1.9e-73 280.8 559 33.8
unitig_22.g6802 Utricularia gibba HOM05D004961 ORTHO05D006258 1.9e-73 280.8 283 55.5
ECA236G4958 Erigeron canadensis HOM05D004961 ORTHO05D006258 5.6e-73 279.3 609 32.3
CARHR171240 Cardamine hirsuta HOM05D004961 ORTHO05D006258 7.3e-73 278.9 630 32.7
arahy.Tifrunner.gnm1.ann1.0VBM10 Arachis hypogaea HOM05D004961 ORTHO05D006258 9.6e-73 278.5 556 33.8
arahy.Tifrunner.gnm1.ann1.T4E2VP Arachis hypogaea HOM05D004961 ORTHO05D006258 9.6e-73 278.5 556 33.8
VMungo0331G0268 Vigna mungo HOM05D004961 ORTHO05D006258 9.6e-73 278.5 559 33.8
AUR62004223 Chenopodium quinoa HOM05D004961 ORTHO05D006258 1.6e-72 277.7 551 33.0
Peaxi162Scf00021g01613 Petunia axillaris HOM05D004961 ORTHO05D006258 1.8e-71 274.2 565 35.6
Aa31LG10G15080 Aethionema arabicum HOM05D004961 ORTHO05D006258 2.4e-71 273.9 625 33.0
MBI12_g27776_MAGBIO Magnolia biondii HOM05D004961 ORTHO05D006258 2.4e-71 273.9 638 32.0
Ah.05g174990 Amaranthus hybridus HOM05D004961 ORTHO05D006258 2.0e-70 270.8 545 32.7
Lj9P570T30 Lonicera japonica HOM05D004961 ORTHO05D006258 2.6e-70 270.4 525 34.3
Carub.0005s2761 Capsella rubella HOM05D004961 ORTHO05D006258 4.4e-70 269.6 634 31.7
CDE02G2832 Ceratophyllum demersum HOM05D004961 ORTHO05D006258 7.6e-70 268.9 575 32.0
Glyma.03G023401 Glycine max HOM05D004961 ORTHO05D006258 9.9e-70 268.5 570 32.8
THA.LOC104802441 Tarenaya hassleriana HOM05D004961 ORTHO05D006258 9.9e-70 268.5 621 32.7
Glyma.01G143700 Glycine max HOM05D004961 ORTHO05D006258 1.7e-69 267.7 591 32.7
Psat4g195520 Pisum sativum HOM05D004961 ORTHO05D006258 3.8e-69 266.5 534 33.7
Sed0025415 Sechium edule HOM05D004961 ORTHO05D006258 6.4e-69 265.8 542 33.4
PSO478G4809 Papaver somniferum HOM05D004961 ORTHO05D006258 2.4e-68 263.8 548 31.6
AL5G43170 Arabidopsis lyrata HOM05D004961 ORTHO05D006258 7.1e-68 262.3 622 31.8
DCAR_025114 Daucus carota HOM05D004961 ORTHO05D006258 1.0e-66 258.5 548 31.8
AT3G60850 Arabidopsis thaliana HOM05D004961 ORTHO05D006258 1.7e-66 257.7 624 31.9
PSO782G4206 Papaver somniferum HOM05D004961 ORTHO05D006258 5.1e-66 256.1 548 31.6
SHI25769 Sapria himalayana HOM05D004961 ORTHO05D006258 6.6e-66 255.8 560 32.1
EL10Ac1g00903 Beta vulgaris HOM05D004961 ORTHO05D006258 3.3e-65 253.4 564 31.2
Lsat_1_v5_gn_7_7241 Lactuca sativa HOM05D004961 ORTHO05D006258 4.3e-65 253.1 567 34.0
HanXRQChr09g0245711 Helianthus annuus HOM05D004961 ORTHO05D006258 2.4e-63 247.3 544 31.2
ATR0810G227 Amborella trichopoda HOM05D004961 ORTHO05D006258 1.5e-62 244.6 623 29.9
A09p53100 Brassica napus HOM05D004961 ORTHO05D006258 2.0e-62 244.2 623 31.0
Sc26g0001210 Simmondsia chinensis HOM05D004961 ORTHO05D006258 2.6e-62 243.8 533 31.5
ECA234G3702 Erigeron canadensis HOM05D004961 ORTHO05D006258 7.6e-62 242.3 635 28.5
BcaC07g40605 Brassica carinata HOM05D004961 ORTHO05D006258 1.3e-61 241.5 628 31.1
BolC8t51170H Brassica oleracea HOM05D004961 ORTHO05D006258 1.3e-61 241.5 628 31.1
BraA09t40736Z Brassica rapa HOM05D004961 ORTHO05D006258 1.3e-61 241.5 643 30.9
C08p35800 Brassica napus HOM05D004961 ORTHO05D006258 4.9e-61 239.6 628 30.9
Nn4g26286 Nelumbo nucifera HOM05D004961 ORTHO05D006258 6.4e-61 239.2 485 33.6
HanXRQChr03g0093851 Helianthus annuus HOM05D004961 ORTHO05D006258 5.4e-60 236.1 502 32.9
HanXRQChr16g0519241 Helianthus annuus HOM05D004961 ORTHO05D006258 5.4e-60 236.1 503 32.0
GSVIVG01027619001 Vitis vinifera HOM05D004961 ORTHO05D006258 7.1e-60 235.7 202 59.9
BcaC07g42645 Brassica carinata HOM05D004961 ORTHO05D006258 2.7e-59 233.8 656 30.8
HanXRQChr06g0169541 Helianthus annuus HOM05D004961 ORTHO05D006258 2.3e-58 230.7 524 31.7
AUR62013625 Chenopodium quinoa HOM05D004961 ORTHO05D006258 3.9e-58 229.9 523 30.8
BcaC08g45088 Brassica carinata HOM05D004961 ORTHO05D006258 6.6e-58 229.2 619 31.7
unitig_8.g3388 Utricularia gibba HOM05D004961 ORTHO05D006258 6.6e-58 229.2 415 36.9
C06p26950 Brassica napus HOM05D004961 ORTHO05D006258 3.3e-57 226.9 619 31.5
BolC6t37869H Brassica oleracea HOM05D004961 ORTHO05D006258 3.3e-57 226.9 619 31.5
CDE11G0257 Ceratophyllum demersum HOM05D004961 ORTHO05D006258 9.6e-57 225.3 463 33.7
SEGI_19190 Sequoiadendron giganteum HOM05D004961 ORTHO05D006258 6.9e-55 219.2 207 52.2
HPP92_025672 Vanilla planifolia HOM05D004961 ORTHO05D006258 1.2e-54 218.4 272 47.8
A07p25240 Brassica napus HOM05D004961 ORTHO05D006258 1.7e-53 214.5 622 29.9
BraA07t30166Z Brassica rapa HOM05D004961 ORTHO05D006258 1.8e-50 204.5 619 29.4
Os03g0247100 Oryza sativa ssp. japonica HOM05D004961 ORTHO05D006258 5.1e-50 203.0 227 48.0
ATR0582G166 Amborella trichopoda HOM05D004961 ORTHO05D006258 5.6e-49 199.5 201 47.8
SMO164G0066 Selaginella moellendorffii HOM05D004961 ORTHO05D006258 4.0e-47 193.4 201 48.8
Zm00001eb398630 Zea mays HOM05D004961 ORTHO05D006258 2.0e-46 191.0 207 49.8
SMO358G0144 Selaginella moellendorffii HOM05D004961 ORTHO05D006258 3.4e-46 190.3 228 44.7
Cpa.g.sc18.116 Carica papaya HOM05D004961 ORTHO05D006258 1.3e-45 188.3 427 30.9
unitig_22.g6801 Utricularia gibba HOM05D004961 ORTHO05D006258 3.9e-34 150.2 194 45.9
Nn1g01213 Nelumbo nucifera HOM05D004961 ORTHO05D006258 2.8e-32 144.1 191 40.8
Eucgr.D02450 Eucalyptus grandis HOM05D004961 ORTHO05D006258 2.4e-31 141.0 189 38.1
Zm00001eb010600 Zea mays HOM05D004961 ORTHO05D006258 1.1e-25 122.1 148 43.2
unitig_8.g3389 Utricularia gibba HOM05D004961 ORTHO05D006258 1.5e-17 95.1 121 46.3
BcaC07g40608 Brassica carinata HOM05D003135 ORTHO05D006258 8.2e-16 89.4 125 42.4
HanXRQChr16g0519231 Helianthus annuus HOM05D004961 ORTHO05D006258 1.7e-13 81.6 111 45.0
MELO3C015747.2 Cucumis melo HOM05D004961 ORTHO05D044953 1.8e-10 71.6 135 37.8
BcaB02g07397 Brassica carinata HOM05D004961 ORTHO05D006258 3.0e-10 70.9 140 33.6
SMO115G0102 Selaginella moellendorffii HOM05D004961 ORTHO05D037335 2.8e-08 64.3 194 22.7
BcaNung07135 Brassica carinata HOM05D004961 ORTHO05D006258 4.8e-08 63.5 90 36.7
BcaC07g40606 Brassica carinata HOM05D003135 ORTHO05D003715 4.5e-06 57.0 85 42.4
AagrBONN_evm.TU.Sc2ySwM_344.1101 Anthoceros agrestis HOM05D004961 ORTHO05D006258 5.9e-06 56.6 158 24.1


User provided reference genes

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