Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold43G16453 Striga asiatica HOM05D004282 ORTHO05D404191 5.4e-114 414.5 226 100.0
SGA_v2.0_scaffold173G39175 Striga asiatica HOM05D004282 ORTHO05D006804 3.8e-11 72.8 41 80.5
SGA_v2.0_scaffold46G17416 Striga asiatica HOM05D063356 ORTHO05D406622 4.2e-10 69.3 147 39.5
Oeu009150.1 Olea europaea HOM05D004282 ORTHO05D006804 9.4e-10 68.2 41 75.6
Oeu019186.1 Olea europaea HOM05D004282 ORTHO05D006804 9.4e-10 68.2 41 75.6
Migut.A00734 Erythranthe guttata HOM05D004282 ORTHO05D006804 3.6e-09 66.2 41 73.2
Peaxi162Scf00119g00947 Petunia axillaris HOM05D004282 ORTHO05D006804 3.6e-09 66.2 41 70.7
MSTRG.11981 Avicennia marina HOM05D004282 ORTHO05D006804 4.7e-09 65.9 41 73.2
ECA233G0272 Erigeron canadensis HOM05D004282 ORTHO05D006804 4.7e-09 65.9 41 70.7
HanXRQChr13g0394231 Helianthus annuus HOM05D004282 ORTHO05D006804 4.7e-09 65.9 41 70.7
unitig_578.g16628 Utricularia gibba HOM05D004282 ORTHO05D006804 8.0e-09 65.1 41 75.6
Solyc08g081150.4 Solanum lycopersicum HOM05D004282 ORTHO05D006804 1.8e-08 63.9 41 68.3
Sopen08g029450 Solanum pennellii HOM05D004282 ORTHO05D006804 1.8e-08 63.9 41 68.3
PGSC0003DMG400012205 Solanum tuberosum HOM05D004282 ORTHO05D006804 1.8e-08 63.9 41 68.3
CAN.G774.52 Capsicum annuum HOM05D004282 ORTHO05D006804 2.3e-08 63.5 41 68.3
ECA246G1826 Erigeron canadensis HOM05D004282 ORTHO05D006804 2.3e-08 63.5 41 70.7
HanXRQChr06g0165861 Helianthus annuus HOM05D004282 ORTHO05D006804 2.3e-08 63.5 41 68.3
Lsat_1_v5_gn_3_6581 Lactuca sativa HOM05D004282 ORTHO05D006804 2.3e-08 63.5 41 68.3
Ah.10g038320 Amaranthus hybridus HOM05D004282 ORTHO05D006804 5.2e-08 62.4 41 70.7
EL10Ac2g04411 Beta vulgaris HOM05D004282 ORTHO05D006804 5.2e-08 62.4 41 70.7
Rhsim02G0231700 Rhododendron simsii HOM05D004282 ORTHO05D006804 5.2e-08 62.4 41 70.7
Aqoxy2G03117 Aquilegia oxysepala HOM05D004282 ORTHO05D006804 6.8e-08 62.0 41 70.7
Lsat_1_v5_gn_6_6601 Lactuca sativa HOM05D004282 ORTHO05D006804 6.8e-08 62.0 41 65.9
Lj2A185G23 Lonicera japonica HOM05D004282 ORTHO05D006804 6.8e-08 62.0 41 70.7
Lj4g0008271 Lotus japonicus HOM05D004282 ORTHO05D006804 6.8e-08 62.0 41 70.7
MD06G1084500 Malus domestica HOM05D004282 ORTHO05D006804 6.8e-08 62.0 41 70.7
Prupe.5G100800 Prunus persica HOM05D004282 ORTHO05D006804 6.8e-08 62.0 41 68.3
MD14G1105600 Malus domestica HOM05D004282 ORTHO05D006804 8.8e-08 61.6 40 72.5
Psat7g032640 Pisum sativum HOM05D004282 ORTHO05D006804 8.8e-08 61.6 41 70.7
Medtr8g098325 Medicago truncatula HOM05D004282 ORTHO05D006804 1.2e-07 61.2 41 68.3
Hund14799 Selenicereus undatus HOM05D004282 ORTHO05D006804 1.2e-07 61.2 40 72.5
TPR.G12833 Trifolium pratense HOM05D004282 ORTHO05D006804 1.2e-07 61.2 41 68.3
Lj8A221T67 Lonicera japonica HOM05D004282 ORTHO05D006804 1.5e-07 60.8 41 68.3
Nitab4.5_0000678g0110 Nicotiana tabacum HOM05D004282 ORTHO05D006804 1.5e-07 60.8 30 86.7
Nitab4.5_0001615g0080 Nicotiana tabacum HOM05D004282 ORTHO05D006804 1.5e-07 60.8 30 86.7
AL2G11570 Arabidopsis lyrata HOM05D004282 ORTHO05D006804 2.0e-07 60.5 41 65.9
AT1G63660 Arabidopsis thaliana HOM05D004282 ORTHO05D006804 2.0e-07 60.5 41 65.9
BcaNung07334 Brassica carinata HOM05D004282 ORTHO05D006804 2.0e-07 60.5 41 65.9
C09p18660 Brassica napus HOM05D004282 ORTHO05D006804 2.0e-07 60.5 41 65.9
Carub.0002s0119 Capsella rubella HOM05D004282 ORTHO05D006804 2.0e-07 60.5 41 65.9
CARHR047680 Cardamine hirsuta HOM05D004282 ORTHO05D006804 2.0e-07 60.5 41 65.9
AUR62009455 Chenopodium quinoa HOM05D004282 ORTHO05D006804 2.0e-07 60.5 41 68.3
AUR62023137 Chenopodium quinoa HOM05D004282 ORTHO05D006804 2.0e-07 60.5 41 68.3
Thhalv10023408m.g Eutrema salsugineum HOM05D004282 ORTHO05D006804 2.0e-07 60.5 41 65.9
FvH4_5g27720 Fragaria vesca HOM05D004282 ORTHO05D006804 2.0e-07 60.5 41 65.9
FAN04G0421 Fragaria x ananassa HOM05D004282 ORTHO05D006804 2.0e-07 60.5 41 65.9
FAN08G1277 Fragaria x ananassa HOM05D004282 ORTHO05D006804 2.0e-07 60.5 41 65.9
FAN13G2512 Fragaria x ananassa HOM05D004282 ORTHO05D006804 2.0e-07 60.5 41 65.9
FAN18G3468 Fragaria x ananassa HOM05D004282 ORTHO05D006804 2.0e-07 60.5 41 65.9
RcHm_v2.0_Chr7g0219471 Rosa chinensis HOM05D004282 ORTHO05D006804 2.0e-07 60.5 41 65.9
Sp2g01000 Schrenkiella parvula HOM05D004282 ORTHO05D006804 2.0e-07 60.5 41 65.9
Ca_17527_v3 Cicer arietinum L. HOM05D004282 ORTHO05D006804 2.6e-07 60.1 41 68.3
PSO478G3502 Papaver somniferum HOM05D004282 ORTHO05D006804 2.6e-07 60.1 41 68.3
PSO782G4766 Papaver somniferum HOM05D004282 ORTHO05D006804 2.6e-07 60.1 41 68.3
Aqoxy7G00313 Aquilegia oxysepala HOM05D004282 ORTHO05D006804 3.4e-07 59.7 41 68.3
PGR042G2758 Punica granatum HOM05D004282 ORTHO05D006804 3.4e-07 59.7 41 68.3
Cfa012224 Carpinus fangiana HOM05D004282 ORTHO05D006804 4.4e-07 59.3 41 68.3
Dinv37635 Davidia involucrata HOM05D004282 ORTHO05D006804 4.4e-07 59.3 41 68.3
Duzib068G0684 Durio zibethinus HOM05D004282 ORTHO05D006804 4.4e-07 59.3 41 65.9
Glyma.08G015000 Glycine max HOM05D004282 ORTHO05D006804 4.4e-07 59.3 40 70.0
Manes.02G019600 Manihot esculenta HOM05D004282 ORTHO05D006804 4.4e-07 59.3 41 68.3
Manes.08G013300 Manihot esculenta HOM05D004282 ORTHO05D006804 4.4e-07 59.3 41 68.3
Potri.003G128200 Populus trichocarpa HOM05D004282 ORTHO05D006804 4.4e-07 59.3 41 68.3
Sabra03G0091200 Salix brachista HOM05D004282 ORTHO05D006804 4.4e-07 59.3 41 68.3
Sed0021454 Sechium edule HOM05D004282 ORTHO05D006804 4.4e-07 59.3 41 65.9
Sc01g0009620 Simmondsia chinensis HOM05D004282 ORTHO05D006804 4.4e-07 59.3 40 67.5
THA.LOC104809396 Tarenaya hassleriana HOM05D004282 ORTHO05D006804 4.4e-07 59.3 41 65.9
THA.LOC104817993 Tarenaya hassleriana HOM05D004282 ORTHO05D006804 4.4e-07 59.3 41 65.9
TAR375G0364 Trochodendron aralioides HOM05D004282 ORTHO05D006804 4.4e-07 59.3 41 68.3
VMungo0251G3615 Vigna mungo HOM05D004282 ORTHO05D006804 4.4e-07 59.3 41 68.3
COL.COLO4_34472 Corchorus olitorius HOM05D004282 ORTHO05D006804 5.7e-07 58.9 41 68.3
Haze_08786 Corylus avellana HOM05D004282 ORTHO05D006804 5.7e-07 58.9 41 68.3
DCAR_006738 Daucus carota HOM05D004282 ORTHO05D006804 5.7e-07 58.9 41 68.3
DCAR_006739 Daucus carota HOM05D004282 ORTHO05D006804 5.7e-07 58.9 41 68.3
DCAR_008399 Daucus carota HOM05D004282 ORTHO05D006804 5.7e-07 58.9 41 68.3
Nn6g33428 Nelumbo nucifera HOM05D004282 ORTHO05D006804 5.7e-07 58.9 41 68.3
Phvul.002G290100 Phaseolus vulgaris HOM05D004282 ORTHO05D006804 5.7e-07 58.9 41 65.9
QL12p032840 Quercus lobata HOM05D004282 ORTHO05D006804 5.7e-07 58.9 41 68.3
TAR374G0019 Trochodendron aralioides HOM05D004282 ORTHO05D006804 5.7e-07 58.9 41 68.3
vmacro11363 Vaccinium macrocarpon HOM05D004282 ORTHO05D006804 5.7e-07 58.9 41 65.9
vmacro22817 Vaccinium macrocarpon HOM05D004282 ORTHO05D006804 5.7e-07 58.9 41 65.9
Actinidia02002 Actinidia chinensis HOM05D004282 ORTHO05D006804 7.5e-07 58.5 41 65.9
CSS0007959 Camellia sinensis var. sinensis HOM05D004282 ORTHO05D006804 7.5e-07 58.5 41 65.9
CSS0014359 Camellia sinensis var. sinensis HOM05D004282 ORTHO05D006804 7.5e-07 58.5 41 65.9
CANSAT21G1770 Cannabis sativa HOM05D004282 ORTHO05D006804 7.5e-07 58.5 40 70.0
CiPaw.11G134600 Carya illinoinensis HOM05D004282 ORTHO05D006804 7.5e-07 58.5 41 68.3
Ciclev10019676m.g Citrus clementina HOM05D004282 ORTHO05D006804 7.5e-07 58.5 41 68.3
Glyma.05G208400 Glycine max HOM05D004282 ORTHO05D006804 7.5e-07 58.5 41 65.9
MBI17_g24637_MAGBIO Magnolia biondii HOM05D004282 ORTHO05D006804 7.5e-07 58.5 41 65.9
TWI81G0763 Tripterygium wilfordii HOM05D004282 ORTHO05D006804 7.5e-07 58.5 41 63.4
Actinidia14566 Actinidia chinensis HOM05D004282 ORTHO05D017169 9.8e-07 58.2 41 65.9
ATR1101G056 Amborella trichopoda HOM05D004282 ORTHO05D006804 9.8e-07 58.2 34 79.4
arahy.Tifrunner.gnm1.ann1.4VFV1G Arachis hypogaea HOM05D004282 ORTHO05D006804 9.8e-07 58.2 41 65.9
arahy.Tifrunner.gnm1.ann1.G1AAHV Arachis hypogaea HOM05D004282 ORTHO05D006804 9.8e-07 58.2 41 65.9
SHI07141 Sapria himalayana HOM05D004282 ORTHO05D006804 9.8e-07 58.2 32 81.2
A09p15390 Brassica napus HOM05D004282 ORTHO05D006804 1.3e-06 57.8 38 68.4
BraA09t37181Z Brassica rapa HOM05D004282 ORTHO05D006804 1.3e-06 57.8 38 68.4
MELO3C005680.2 Cucumis melo HOM05D004282 ORTHO05D006804 1.3e-06 57.8 41 63.4
CsaV3_5G002770 Cucumis sativus L. HOM05D004282 ORTHO05D006804 1.3e-06 57.8 41 63.4
Gohir.A03G016700 Gossypium hirsutum HOM05D004282 ORTHO05D006804 1.3e-06 57.8 41 65.9
Gohir.A08G182900 Gossypium hirsutum HOM05D004282 ORTHO05D006804 1.3e-06 57.8 41 65.9
Gohir.D03G151200 Gossypium hirsutum HOM05D004282 ORTHO05D006804 1.3e-06 57.8 41 65.9
Gorai.003G158400 Gossypium raimondii HOM05D004282 ORTHO05D006804 1.3e-06 57.8 41 65.9
Hma1.2p1_0209F.1_g088780 Hydrangea macrophylla HOM05D004282 ORTHO05D006804 1.3e-06 57.8 41 65.9
Lalb_Chr05g0224721 Lupinus albus HOM05D004282 ORTHO05D006804 1.3e-06 57.8 41 65.9
Thecc.03G279500 Theobroma cacao HOM05D004282 ORTHO05D006804 1.3e-06 57.8 41 65.9
GSVIVG01019748001 Vitis vinifera HOM05D004282 ORTHO05D006804 1.3e-06 57.8 41 65.9
Eucgr.E00626 Eucalyptus grandis HOM05D004282 ORTHO05D006804 1.7e-06 57.4 41 65.9
TWI60G0060 Tripterygium wilfordii HOM05D004282 ORTHO05D006804 1.7e-06 57.4 41 63.4
Cc08_g14800 Coffea canephora HOM05D004282 ORTHO05D006804 2.2e-06 57.0 34 73.5
Mapoly0002s0326 Marchantia polymorpha HOM05D004282 ORTHO05D006804 2.2e-06 57.0 40 67.5
SGA_v2.0_scaffold42G15978 Striga asiatica HOM05D003873 ORTHO05D004127 2.2e-06 57.0 35 77.1
HPP92_014989 Vanilla planifolia HOM05D004282 ORTHO05D006804 2.2e-06 57.0 41 63.4
Zm00001eb434370 Zea mays HOM05D004282 ORTHO05D006804 2.2e-06 57.0 34 73.5
Aa31LG2G870 Aethionema arabicum HOM05D004282 ORTHO05D006804 2.8e-06 56.6 38 65.8
BolC9t54762H Brassica oleracea HOM05D004282 ORTHO05D006804 2.8e-06 56.6 38 65.8
Os08g0326600 Oryza sativa ssp. japonica HOM05D004282 ORTHO05D006804 2.8e-06 56.6 34 73.5
ClCG01G002660 Citrullus lanatus HOM05D004282 ORTHO05D006804 3.7e-06 56.2 33 75.8
CDE06G0245 Ceratophyllum demersum HOM05D004282 ORTHO05D006804 4.9e-06 55.8 41 65.9
CDE06G1269 Ceratophyllum demersum HOM05D004282 ORTHO05D006804 4.9e-06 55.8 41 65.9
Duzib084G1154 Durio zibethinus HOM05D004282 ORTHO05D006804 6.3e-06 55.5 41 65.9
Gohir.D08G201400 Gossypium hirsutum HOM05D004282 ORTHO05D006804 6.3e-06 55.5 41 63.4
Atru.chr9.2181 Acer truncatum HOM05D004282 ORTHO05D006804 8.3e-06 55.1 41 61.0
CBR_g48399 Chara braunii HOM05D004282 ORTHO05D006804 8.3e-06 55.1 34 73.5
Gorai.004G212300 Gossypium raimondii HOM05D004282 ORTHO05D006804 8.3e-06 55.1 41 63.4


User provided reference genes

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