Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold43G16323 Striga asiatica HOM05D005543 ORTHO05D006584 8.3e-60 233.4 111 100.0
SGA_v2.0_scaffold166G38393 Striga asiatica HOM05D005543 ORTHO05D006584 7.3e-40 167.2 110 74.5
SalBow6G1236 Salvia bowleyana HOM05D005543 ORTHO05D006584 4.8e-31 137.9 108 61.1
Migut.N02941 Erythranthe guttata HOM05D005543 ORTHO05D006584 3.2e-27 125.2 100 57.0
MSTRG.22116 Avicennia marina HOM05D005543 ORTHO05D006584 2.1e-26 122.5 111 55.0
Atru.chr13.1972 Acer truncatum HOM05D005543 ORTHO05D006584 1.1e-24 116.7 78 62.8
Cc10_g06390 Coffea canephora HOM05D005543 ORTHO05D006584 4.3e-24 114.8 102 55.9
Oeu022062.1 Olea europaea HOM05D005543 ORTHO05D006584 9.6e-24 113.6 103 50.5
ClCG08G007180 Citrullus lanatus HOM05D005543 ORTHO05D006584 2.1e-23 112.5 104 51.0
MELO3C019959.2 Cucumis melo HOM05D005543 ORTHO05D006584 3.7e-23 111.7 93 54.8
Nitab4.5_0001000g0150 Nicotiana tabacum HOM05D005543 ORTHO05D006584 6.2e-23 110.9 93 58.1
CsaV3_6G004850 Cucumis sativus L. HOM05D005543 ORTHO05D006584 1.4e-22 109.8 93 53.8
Ciclev10002600m.g Citrus clementina HOM05D005543 ORTHO05D006584 2.4e-22 109.0 94 50.0
Sed0022332 Sechium edule HOM05D005543 ORTHO05D006584 2.4e-22 109.0 108 47.2
Hma1.2p1_0276F.1_g110980 Hydrangea macrophylla HOM05D005543 ORTHO05D006584 3.1e-22 108.6 86 58.1
Peaxi162Scf00226g00217 Petunia axillaris HOM05D005543 ORTHO05D006584 4.0e-22 108.2 75 64.0
Nitab4.5_0002585g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 5.3e-22 107.8 72 62.5
TWI53G2072 Tripterygium wilfordii HOM05D005543 ORTHO05D006584 6.9e-22 107.5 85 57.6
CSS0010673 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 9.0e-22 107.1 81 58.0
Nitab4.5_0000433g0010 Nicotiana tabacum HOM05D005543 ORTHO05D006584 9.0e-22 107.1 90 56.7
Actinidia17758 Actinidia chinensis HOM05D005543 ORTHO05D006584 1.2e-21 106.7 81 60.5
Cpa.g.sc26.124 Carica papaya HOM05D005543 ORTHO05D006584 1.2e-21 106.7 87 57.5
Eucgr.F04165 Eucalyptus grandis HOM05D005543 ORTHO05D006584 1.2e-21 106.7 72 58.3
PGR102G0915 Punica granatum HOM05D005543 ORTHO05D006584 1.2e-21 106.7 72 61.1
PGSC0003DMG400031139 Solanum tuberosum HOM05D005543 ORTHO05D006584 1.2e-21 106.7 89 59.6
TAR625G0687 Trochodendron aralioides HOM05D005543 ORTHO05D006584 1.2e-21 106.7 78 61.5
CSS0045165 Camellia sinensis var. sinensis HOM05D005543 ORTHO05D006584 2.0e-21 105.9 85 57.6
Haze_17833 Corylus avellana HOM05D005543 ORTHO05D006584 2.0e-21 105.9 72 62.5
Lj2g0006240 Lotus japonicus HOM05D005543 ORTHO05D006584 2.0e-21 105.9 88 53.4
Solyc04g072120.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 2.0e-21 105.9 94 57.4
Sopen04g028290 Solanum pennellii HOM05D005543 ORTHO05D006584 2.0e-21 105.9 94 57.4
Sopen12g029440 Solanum pennellii HOM05D005543 ORTHO05D006584 2.0e-21 105.9 69 63.8
unitig_578.g16221 Utricularia gibba HOM05D005543 ORTHO05D006584 2.0e-21 105.9 78 62.8
FAN15G0123 Fragaria x ananassa HOM05D005543 ORTHO05D006584 2.6e-21 105.5 85 57.6
Gohir.D05G248600 Gossypium hirsutum HOM05D005543 ORTHO05D006584 2.6e-21 105.5 77 58.4
Gorai.009G259700 Gossypium raimondii HOM05D005543 ORTHO05D006584 2.6e-21 105.5 77 58.4
Nitab4.5_0004541g0020 Nicotiana tabacum HOM05D005543 ORTHO05D006584 2.6e-21 105.5 79 58.2
Solyc12g056760.2 Solanum lycopersicum HOM05D005543 ORTHO05D006584 2.6e-21 105.5 69 63.8
PGSC0003DMG400016956 Solanum tuberosum HOM05D005543 ORTHO05D006584 2.6e-21 105.5 69 63.8
CANSAT25G2335 Cannabis sativa HOM05D005543 ORTHO05D006584 3.4e-21 105.1 82 54.9
Dinv41020 Davidia involucrata HOM05D005543 ORTHO05D006584 3.4e-21 105.1 107 49.5
FvH4_2g12791 Fragaria vesca HOM05D005543 ORTHO05D006584 3.4e-21 105.1 85 57.6
FAN27G1145 Fragaria x ananassa HOM05D005543 ORTHO05D006584 3.4e-21 105.1 85 57.6
Haze_17839 Corylus avellana HOM05D005543 ORTHO05D006584 4.5e-21 104.8 72 61.1
FAN24G1753 Fragaria x ananassa HOM05D005543 ORTHO05D006584 4.5e-21 104.8 85 56.5
Gohir.A05G247100 Gossypium hirsutum HOM05D005543 ORTHO05D006584 5.8e-21 104.4 72 61.1
Lj4A705G47 Lonicera japonica HOM05D005543 ORTHO05D006584 5.8e-21 104.4 79 58.2
Manes.02G185600 Manihot esculenta HOM05D005543 ORTHO05D006584 5.8e-21 104.4 72 56.9
Potri.002G062300 Populus trichocarpa HOM05D005543 ORTHO05D006584 5.8e-21 104.4 87 55.2
Peaxi162Scf00160g01739 Petunia axillaris HOM05D005543 ORTHO05D006584 7.6e-21 104.0 72 59.7
CiPaw.16G007100 Carya illinoinensis HOM05D005543 ORTHO05D006584 1.0e-20 103.6 75 57.3
ECA232G2646 Erigeron canadensis HOM05D005543 ORTHO05D006584 1.3e-20 103.2 84 53.6
Thecc.08G164300 Theobroma cacao HOM05D005543 ORTHO05D006584 1.3e-20 103.2 80 55.0
Nn5g28876 Nelumbo nucifera HOM05D005543 ORTHO05D006584 1.7e-20 102.8 100 49.0
Prupe.8G044500 Prunus persica HOM05D005543 ORTHO05D006584 2.2e-20 102.4 71 60.6
Sc20g0003140 Simmondsia chinensis HOM05D005543 ORTHO05D006584 3.8e-20 101.7 106 46.2
Aa31LG4G8860 Aethionema arabicum HOM05D005543 ORTHO05D006584 4.9e-20 101.3 86 51.2
Duzib116G0276 Durio zibethinus HOM05D005543 ORTHO05D006584 4.9e-20 101.3 97 46.4
Lsat_1_v5_gn_9_42581 Lactuca sativa HOM05D005543 ORTHO05D006584 4.9e-20 101.3 86 54.7
HanXRQChr11g0320551 Helianthus annuus HOM05D005543 ORTHO05D006584 6.5e-20 100.9 94 52.1
MD10G1038300 Malus domestica HOM05D005543 ORTHO05D006584 6.5e-20 100.9 75 60.0
THA.LOC104800097 Tarenaya hassleriana HOM05D005543 ORTHO05D006584 6.5e-20 100.9 83 53.0
COL.COLO4_13722 Corchorus olitorius HOM05D005543 ORTHO05D006584 8.4e-20 100.5 80 53.8
Hund17502 Selenicereus undatus HOM05D005543 ORTHO05D006584 8.4e-20 100.5 76 60.5
MD05G1036200 Malus domestica HOM05D005543 ORTHO05D006584 1.1e-19 100.1 80 56.2
arahy.Tifrunner.gnm1.ann1.FFL75L Arachis hypogaea HOM05D005543 ORTHO05D006584 1.4e-19 99.8 85 52.9
arahy.Tifrunner.gnm1.ann1.XA0Q13 Arachis hypogaea HOM05D005543 ORTHO05D006584 1.4e-19 99.8 85 52.9
RcHm_v2.0_Chr6g0273681 Rosa chinensis HOM05D005543 ORTHO05D006584 3.2e-19 98.6 81 58.0
PSO675G1818 Papaver somniferum HOM05D005543 ORTHO05D006584 4.2e-19 98.2 80 55.0
AUR62026611 Chenopodium quinoa HOM05D005543 ORTHO05D006584 7.1e-19 97.4 108 48.1
PSO541G4578 Papaver somniferum HOM05D005543 ORTHO05D006584 7.1e-19 97.4 80 53.8
Rhsim06G0093300 Rhododendron simsii HOM05D005543 ORTHO05D006584 7.1e-19 97.4 84 52.4
Ah.05g168360 Amaranthus hybridus HOM05D005543 ORTHO05D006584 9.3e-19 97.1 87 48.3
Phvul.004G088200 Phaseolus vulgaris HOM05D005543 ORTHO05D006584 1.2e-18 96.7 86 50.0
Sabra05G0151400 Salix brachista HOM05D005543 ORTHO05D006584 1.2e-18 96.7 72 58.3
Sabra02G0050300 Salix brachista HOM05D005543 ORTHO05D006584 1.6e-18 96.3 102 46.1
HPP92_007671 Vanilla planifolia HOM05D005543 ORTHO05D006584 1.6e-18 96.3 93 50.5
BcaC08g45757 Brassica carinata HOM05D005543 ORTHO05D006584 2.1e-18 95.9 86 48.8
C06p35380 Brassica napus HOM05D005543 ORTHO05D006584 2.1e-18 95.9 86 48.8
BolC6t38643H Brassica oleracea HOM05D005543 ORTHO05D006584 2.1e-18 95.9 86 48.8
Lj7A386T90 Lonicera japonica HOM05D005543 ORTHO05D006584 2.1e-18 95.9 95 44.2
vmacro21199 Vaccinium macrocarpon HOM05D005543 ORTHO05D006584 2.1e-18 95.9 84 52.4
AUR62034923 Chenopodium quinoa HOM05D005543 ORTHO05D006584 4.6e-18 94.7 73 58.9
Nn1g05159 Nelumbo nucifera HOM05D005543 ORTHO05D006584 4.6e-18 94.7 104 46.2
EL10Ac1g01633 Beta vulgaris HOM05D005543 ORTHO05D006584 6.0e-18 94.4 73 53.4
SGA_v2.0_scaffold130G34341 Striga asiatica HOM05D005543 ORTHO05D006584 1.3e-17 93.2 106 50.0
Aqoxy6G00453 Aquilegia oxysepala HOM05D005543 ORTHO05D006584 1.8e-17 92.8 63 61.9
Sp5g26800 Schrenkiella parvula HOM05D005543 ORTHO05D006584 1.8e-17 92.8 110 44.5
SpUn0095_0030 Schrenkiella parvula HOM05D005543 ORTHO05D006584 1.8e-17 92.8 110 44.5
A07p30600 Brassica napus HOM05D005543 ORTHO05D006584 2.3e-17 92.4 86 47.7
BraA07t30695Z Brassica rapa HOM05D005543 ORTHO05D006584 3.0e-17 92.0 86 47.7
Thhalv10019179m.g Eutrema salsugineum HOM05D005543 ORTHO05D006584 3.9e-17 91.7 86 48.8
Glyma.16G160100 Glycine max HOM05D005543 ORTHO05D006584 3.9e-17 91.7 77 51.9
Lalb_Chr06g0161821 Lupinus albus HOM05D005543 ORTHO05D006584 3.9e-17 91.7 103 40.8
BcaC08g46604 Brassica carinata HOM05D005543 ORTHO05D006584 5.1e-17 91.3 86 48.8
BcaC08g46607 Brassica carinata HOM05D005543 ORTHO05D006584 5.1e-17 91.3 86 48.8
C06p45840 Brassica napus HOM05D005543 ORTHO05D006584 5.1e-17 91.3 96 49.0
BraA07t31358Z Brassica rapa HOM05D005543 ORTHO05D006584 6.7e-17 90.9 74 54.1
CDE05G2658 Ceratophyllum demersum HOM05D005543 ORTHO05D006584 8.7e-17 90.5 66 56.1
DCAR_009611 Daucus carota HOM05D005543 ORTHO05D006584 8.7e-17 90.5 97 43.3
TAR381G0628 Trochodendron aralioides HOM05D005543 ORTHO05D006584 8.7e-17 90.5 65 55.4
BolC6t39636H Brassica oleracea HOM05D005543 ORTHO05D006584 1.1e-16 90.1 96 47.9
A07p37930 Brassica napus HOM05D005543 ORTHO05D006584 1.5e-16 89.7 96 47.9
GSVIVG01013678001 Vitis vinifera HOM05D005543 ORTHO05D006584 1.5e-16 89.7 77 57.1
BcaB03g15617 Brassica carinata HOM05D005543 ORTHO05D006584 1.9e-16 89.4 82 48.8
QL02p036789 Quercus lobata HOM05D005543 ORTHO05D006584 1.9e-16 89.4 89 46.1
SEGI_37275 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 1.9e-16 89.4 72 48.6
Carub.0002s1854 Capsella rubella HOM05D005543 ORTHO05D006584 2.5e-16 89.0 69 55.1
VMungo0464G0571 Vigna mungo HOM05D005543 ORTHO05D006584 3.3e-16 88.6 78 47.4
SEGI_03773 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 4.3e-16 88.2 80 42.5
SEGI_04047 Sequoiadendron giganteum HOM05D005543 ORTHO05D006584 4.3e-16 88.2 80 42.5
AL2G31350 Arabidopsis lyrata HOM05D005543 ORTHO05D006584 5.7e-16 87.8 69 55.1
CARHR291000 Cardamine hirsuta HOM05D005543 ORTHO05D006584 7.4e-16 87.4 96 45.8
AT1G71780 Arabidopsis thaliana HOM05D005543 ORTHO05D006584 9.7e-16 87.0 69 53.6
Psat0s2687g0120 Pisum sativum HOM05D005543 ORTHO05D006584 1.6e-15 86.3 78 46.2
Medtr6g034680 Medicago truncatula HOM05D005543 ORTHO05D006584 2.2e-15 85.9 99 39.4
DCAR_019968 Daucus carota HOM05D005543 ORTHO05D006584 3.7e-15 85.1 94 39.4
Ca_04656_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 2.4e-14 82.4 84 45.2
Medtr1g097400 Medicago truncatula HOM05D005543 ORTHO05D006584 3.8e-12 75.1 69 44.9
Psat6g189440 Pisum sativum HOM05D005543 ORTHO05D006584 1.4e-11 73.2 96 37.5
TPR.G17022 Trifolium pratense HOM05D005543 ORTHO05D006584 1.9e-11 72.8 69 40.6
SGA_v2.0_scaffold16G07845 Striga asiatica HOM05D005543 ORTHO05D006584 7.2e-11 70.9 93 44.1
Ca_10645_v3 Cicer arietinum L. HOM05D005543 ORTHO05D006584 9.4e-11 70.5 96 33.3
Lj5g0027482 Lotus japonicus HOM05D005543 ORTHO05D006584 2.1e-10 69.3 72 40.3
Os01g0715800 Oryza sativa ssp. japonica HOM05D005543 ORTHO05D006584 1.0e-09 67.0 67 43.3
VMungo1127G1001 Vigna mungo HOM05D005543 ORTHO05D006584 9.7e-08 60.5 59 45.8


User provided reference genes

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