Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold43G16304 Striga asiatica HOM05D007527 ORTHO05D009523 4.2e-63 244.6 128 100.0
Migut.N01835 Erythranthe guttata HOM05D007527 ORTHO05D009523 3.0e-29 132.1 129 60.5
MSTRG.5063 Avicennia marina HOM05D007527 ORTHO05D009523 5.3e-26 121.3 140 57.1
TWI12G0113 Tripterygium wilfordii HOM05D007527 ORTHO05D009523 1.3e-19 100.1 130 44.6
Peaxi162Scf00332g00530 Petunia axillaris HOM05D007527 ORTHO05D009523 8.2e-19 97.4 116 49.1
GSVIVG01017356001 Vitis vinifera HOM05D007527 ORTHO05D009523 1.1e-18 97.1 129 49.6
Rhsim12G0190600 Rhododendron simsii HOM05D007527 ORTHO05D009523 1.4e-18 96.7 141 44.7
Gorai.006G101400 Gossypium raimondii HOM05D007527 ORTHO05D009523 1.8e-18 96.3 140 47.1
Gohir.D09G085400 Gossypium hirsutum HOM05D007527 ORTHO05D009523 5.3e-18 94.7 140 46.4
Actinidia15754 Actinidia chinensis HOM05D007527 ORTHO05D009523 7.0e-18 94.4 138 44.2
Nitab4.5_0008560g0010 Nicotiana tabacum HOM05D007527 ORTHO05D009523 7.0e-18 94.4 116 49.1
CSS0000513 Camellia sinensis var. sinensis HOM05D007527 ORTHO05D009523 9.1e-18 94.0 87 57.5
Gohir.A09G085400 Gossypium hirsutum HOM05D007527 ORTHO05D009523 1.6e-17 93.2 138 45.7
Nitab4.5_0003463g0010 Nicotiana tabacum HOM05D007527 ORTHO05D009523 1.6e-17 93.2 114 49.1
Thecc.06G029900 Theobroma cacao HOM05D007527 ORTHO05D009523 2.0e-17 92.8 138 44.2
Sabra03G0018000 Salix brachista HOM05D007527 ORTHO05D009523 2.6e-17 92.4 97 53.6
HanXRQChr10g0302821 Helianthus annuus HOM05D007527 ORTHO05D009523 4.5e-17 91.7 108 50.9
Manes.04G111800 Manihot esculenta HOM05D007527 ORTHO05D009523 5.9e-17 91.3 94 52.1
Sopen03g035730 Solanum pennellii HOM05D007527 ORTHO05D009523 5.9e-17 91.3 92 53.3
TAR383G1076 Trochodendron aralioides HOM05D007527 ORTHO05D009523 1.7e-16 89.7 102 53.9
vmacro16881 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 2.9e-16 89.0 142 41.5
CAN.G407.74 Capsicum annuum HOM05D007527 ORTHO05D009523 3.8e-16 88.6 129 46.5
Dinv30616 Davidia involucrata HOM05D007527 ORTHO05D009523 3.8e-16 88.6 93 57.0
Solyc03g116800.4 Solanum lycopersicum HOM05D007527 ORTHO05D009523 3.8e-16 88.6 86 54.7
COL.COLO4_11916 Corchorus olitorius HOM05D007527 ORTHO05D009523 5.0e-16 88.2 137 46.7
Ciclev10026543m.g Citrus clementina HOM05D007527 ORTHO05D009523 1.1e-15 87.0 96 55.2
ECA234G1859 Erigeron canadensis HOM05D007527 ORTHO05D009523 1.9e-15 86.3 61 68.9
Lsat_1_v5_gn_5_131420 Lactuca sativa HOM05D007527 ORTHO05D009523 1.9e-15 86.3 89 53.9
PGSC0003DMG400000643 Solanum tuberosum HOM05D007527 ORTHO05D009523 1.9e-15 86.3 92 50.0
CsaV3_4G001960 Cucumis sativus L. HOM05D007527 ORTHO05D009523 5.5e-15 84.7 82 54.9
Eucgr.B02436 Eucalyptus grandis HOM05D007527 ORTHO05D009523 5.5e-15 84.7 120 44.2
Atru.chr1.2902 Acer truncatum HOM05D007527 ORTHO05D009523 7.2e-15 84.3 111 46.8
Lalb_Chr24g0395451 Lupinus albus HOM05D007527 ORTHO05D009523 7.2e-15 84.3 127 40.2
FvH4_6g29470 Fragaria vesca HOM05D007527 ORTHO05D009523 9.4e-15 84.0 135 43.7
FAN05G4324 Fragaria x ananassa HOM05D007527 ORTHO05D009523 1.6e-14 83.2 132 43.2
RcHm_v2.0_Chr2g0134671 Rosa chinensis HOM05D007527 ORTHO05D009523 2.1e-14 82.8 111 45.9
Duzib160G0519 Durio zibethinus HOM05D007527 ORTHO05D009523 2.7e-14 82.4 89 52.8
FAN14G2734 Fragaria x ananassa HOM05D007527 ORTHO05D009523 2.7e-14 82.4 133 43.6
MD17G1213600 Malus domestica HOM05D007527 ORTHO05D009523 2.7e-14 82.4 142 41.5
Thhalv10021721m.g Eutrema salsugineum HOM05D007527 ORTHO05D009523 3.6e-14 82.0 125 46.4
Sc07g0004280 Simmondsia chinensis HOM05D007527 ORTHO05D009523 3.6e-14 82.0 135 44.4
Cpa.g.sc67.40 Carica papaya HOM05D007527 ORTHO05D009523 4.7e-14 81.6 108 46.3
CiPaw.01G249100 Carya illinoinensis HOM05D007527 ORTHO05D009523 4.7e-14 81.6 96 52.1
Sp3g14230 Schrenkiella parvula HOM05D007527 ORTHO05D009523 6.1e-14 81.3 98 48.0
CANSAT56G2488 Cannabis sativa HOM05D007527 ORTHO05D009523 8.0e-14 80.9 69 62.3
Cc04_g04490 Coffea canephora HOM05D007527 ORTHO05D009523 8.0e-14 80.9 136 42.6
MELO3C017840.2 Cucumis melo HOM05D007527 ORTHO05D009523 8.0e-14 80.9 82 51.2
Sed0020992 Sechium edule HOM05D007527 ORTHO05D009523 8.0e-14 80.9 118 42.4
Potri.001G202000 Populus trichocarpa HOM05D007527 ORTHO05D009523 1.0e-13 80.5 66 65.2
ClCG07G012200 Citrullus lanatus HOM05D007527 ORTHO05D009523 1.4e-13 80.1 75 56.0
PGR102G2450 Punica granatum HOM05D007527 ORTHO05D009523 1.4e-13 80.1 87 55.2
BcaC09g48568 Brassica carinata HOM05D007527 ORTHO05D009523 1.8e-13 79.7 126 42.1
C01p48470 Brassica napus HOM05D007527 ORTHO05D009523 1.8e-13 79.7 126 42.1
BolC1t04807H Brassica oleracea HOM05D007527 ORTHO05D009523 1.8e-13 79.7 126 42.1
FAN02G0939 Fragaria x ananassa HOM05D007527 ORTHO05D009523 1.8e-13 79.7 105 46.7
Hma1.2p1_0242F.1_g100670 Hydrangea macrophylla HOM05D007527 ORTHO05D009523 1.8e-13 79.7 98 49.0
AL3G28550 Arabidopsis lyrata HOM05D007527 ORTHO05D009523 4.0e-13 78.6 87 51.7
A01p38200 Brassica napus HOM05D007527 ORTHO05D009523 5.2e-13 78.2 126 42.1
BraA01t03878Z Brassica rapa HOM05D007527 ORTHO05D009523 5.2e-13 78.2 126 42.1
FAN09G0177 Fragaria x ananassa HOM05D007527 ORTHO05D009523 6.8e-13 77.8 105 45.7
RcHm_v2.0_Chr2g0134751 Rosa chinensis HOM05D007527 ORTHO05D009523 1.2e-12 77.0 124 38.7
Manes.11G058100 Manihot esculenta HOM05D007527 ORTHO05D009523 1.5e-12 76.6 61 60.7
Ah.01g006590 Amaranthus hybridus HOM05D007527 ORTHO05D009523 2.0e-12 76.3 81 56.8
RcHm_v2.0_Chr2g0134971 Rosa chinensis HOM05D007527 ORTHO05D009523 2.6e-12 75.9 106 46.2
Aa31LG8G3080 Aethionema arabicum HOM05D007527 ORTHO05D009523 3.4e-12 75.5 87 51.7
arahy.Tifrunner.gnm1.ann1.HBF5UW Arachis hypogaea HOM05D007527 ORTHO05D009523 3.4e-12 75.5 75 54.7
arahy.Tifrunner.gnm1.ann1.JM0XW1 Arachis hypogaea HOM05D007527 ORTHO05D009523 3.4e-12 75.5 75 54.7
Glyma.15G006800 Glycine max HOM05D007527 ORTHO05D009523 3.4e-12 75.5 94 52.1
AT3G15900 Arabidopsis thaliana HOM05D007527 ORTHO05D009523 4.4e-12 75.1 91 48.4
DCAR_021351 Daucus carota HOM05D002695 ORTHO05D002964 4.4e-12 75.1 98 44.9
Lj3g0017680 Lotus japonicus HOM05D007527 ORTHO05D009523 4.4e-12 75.1 105 41.9
Prupe.3G089500 Prunus persica HOM05D007527 ORTHO05D009523 4.4e-12 75.1 131 42.7
Phvul.005G178900 Phaseolus vulgaris HOM05D007527 ORTHO05D009523 5.7e-12 74.7 112 45.5
VMungo1080G0810 Vigna mungo HOM05D007527 ORTHO05D009523 7.5e-12 74.3 62 62.9
MBI15_g00959_MAGBIO Magnolia biondii HOM05D007527 ORTHO05D009523 1.3e-11 73.6 63 60.3
Zm00001eb192090 Zea mays HOM05D007527 ORTHO05D009523 1.7e-11 73.2 94 51.1
vmacro07515 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 2.2e-11 72.8 59 62.7
Aqoxy7G01859 Aquilegia oxysepala HOM05D007527 ORTHO05D009523 2.8e-11 72.4 63 60.3
PSO170G5637 Papaver somniferum HOM05D007527 ORTHO05D009523 2.8e-11 72.4 56 64.3
Nn8g39533 Nelumbo nucifera HOM05D007527 ORTHO05D009523 3.7e-11 72.0 58 62.1
BcaB04g20897 Brassica carinata HOM05D007527 ORTHO05D009523 4.8e-11 71.6 126 38.9
CDE03G0516 Ceratophyllum demersum HOM05D007527 ORTHO05D009523 4.8e-11 71.6 58 58.6
Medtr2g104040 Medicago truncatula HOM05D007527 ORTHO05D009523 4.8e-11 71.6 68 58.8
PSO017G1806 Papaver somniferum HOM05D007527 ORTHO05D009523 1.1e-10 70.5 55 63.6
Psat5g303480 Pisum sativum HOM05D007527 ORTHO05D009523 1.1e-10 70.5 90 47.8
Cfa001953 Carpinus fangiana HOM05D007527 ORTHO05D009523 1.8e-10 69.7 111 42.3
Os02g0804400 Oryza sativa ssp. japonica HOM05D007527 ORTHO05D009523 1.8e-10 69.7 89 49.4
CDE04G3040 Ceratophyllum demersum HOM05D002695 ORTHO05D002964 4.1e-10 68.6 78 46.2
Hund06552 Selenicereus undatus HOM05D007527 ORTHO05D009523 5.4e-10 68.2 83 49.4
HPP92_017057 Vanilla planifolia HOM05D007527 ORTHO05D009523 7.0e-10 67.8 129 38.0
Carub.0003s1564 Capsella rubella HOM05D007527 ORTHO05D009523 1.2e-09 67.0 74 51.4
Haze_16571 Corylus avellana HOM05D007527 ORTHO05D009523 2.0e-09 66.2 73 54.8
CARHR091010 Cardamine hirsuta HOM05D007527 ORTHO05D009523 5.9e-09 64.7 45 66.7
ATR0716G018 Amborella trichopoda HOM05D007527 ORTHO05D009523 1.0e-08 63.9 68 52.9
vmacro16886 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 6.5e-08 61.2 47 66.0
vmacro16888 Vaccinium macrocarpon HOM05D007527 ORTHO05D009523 1.5e-07 60.1 52 55.8


User provided reference genes

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