Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold43G16289 Striga asiatica HOM05D002974 ORTHO05D002992 6.6e-76 287.3 151 100.0
SGA_v2.0_scaffold232G43495 Striga asiatica HOM05D002974 ORTHO05D002992 2.3e-28 129.4 158 54.4
Migut.N01854 Erythranthe guttata HOM05D002974 ORTHO05D002992 1.2e-21 107.1 138 51.4
MSTRG.28034 Avicennia marina HOM05D002974 ORTHO05D002992 7.9e-21 104.4 145 53.1
MSTRG.5073 Avicennia marina HOM05D002974 ORTHO05D002992 5.3e-17 91.7 141 47.5
Oeu006786.1 Olea europaea HOM05D002974 ORTHO05D002992 3.8e-15 85.5 134 45.5
Oeu053079.1 Olea europaea HOM05D002974 ORTHO05D002992 1.9e-14 83.2 140 43.6
Oeu011571.1 Olea europaea HOM05D002974 ORTHO05D002992 4.2e-14 82.0 127 42.5
SalBow6G5116 Salvia bowleyana HOM05D002974 ORTHO05D002992 4.7e-13 78.6 113 48.7
Oeu064130.1 Olea europaea HOM05D002974 ORTHO05D002992 8.0e-13 77.8 149 42.3
Dinv32015 Davidia involucrata HOM05D002974 ORTHO05D002992 1.0e-12 77.4 141 39.7
Dinv44699 Davidia involucrata HOM05D002974 ORTHO05D002992 8.8e-12 74.3 146 39.7
Migut.B01240 Erythranthe guttata HOM05D002974 ORTHO05D002992 2.0e-11 73.2 126 43.7
SalBow5G5227 Salvia bowleyana HOM05D002974 ORTHO05D002992 2.6e-11 72.8 125 46.4
Solyc01g096510.2 Solanum lycopersicum HOM05D002974 ORTHO05D002992 7.5e-11 71.2 140 37.1
Sopen01g040240 Solanum pennellii HOM05D002974 ORTHO05D002992 9.7e-11 70.9 140 37.1
Potri.001G029700 Populus trichocarpa HOM05D002974 ORTHO05D002992 3.1e-09 65.9 139 38.8
CAN.G134.10 Capsicum annuum HOM05D002974 ORTHO05D002992 4.1e-09 65.5 146 34.9
PGR031G0048 Punica granatum HOM05D002974 ORTHO05D002992 5.3e-09 65.1 120 40.8
CANSAT56G2792 Cannabis sativa HOM05D002974 ORTHO05D002992 2.0e-08 63.2 59 62.7
CiPaw.14G008700 Carya illinoinensis HOM05D002974 ORTHO05D002992 2.0e-08 63.2 64 53.1
Potri.003G194700 Populus trichocarpa HOM05D002974 ORTHO05D002992 2.0e-08 63.2 138 38.4
PGSC0003DMG400005401 Solanum tuberosum HOM05D002974 ORTHO05D002992 2.0e-08 63.2 153 32.7
Manes.04G157400 Manihot esculenta HOM05D002974 ORTHO05D002992 4.5e-08 62.0 124 40.3
Sabra03G0145400 Salix brachista HOM05D002974 ORTHO05D002992 5.9e-08 61.6 101 42.6
unitig_26.g9507 Utricularia gibba HOM05D002974 ORTHO05D002992 1.0e-07 60.8 112 42.9
MELO3C012484.2 Cucumis melo HOM05D002974 ORTHO05D002992 1.3e-07 60.5 51 60.8
CiPaw.13G015100 Carya illinoinensis HOM05D002974 ORTHO05D002992 2.2e-07 59.7 56 53.6
Duzib114G0524 Durio zibethinus HOM05D002974 ORTHO05D002992 2.2e-07 59.7 59 61.0
QL04p017813 Quercus lobata HOM05D002974 ORTHO05D002992 2.2e-07 59.7 68 51.5
QL04p018674 Quercus lobata HOM05D002974 ORTHO05D002992 2.2e-07 59.7 68 51.5
CsaV3_5G036860 Cucumis sativus L. HOM05D002974 ORTHO05D002992 2.9e-07 59.3 51 58.8
Peaxi162Scf00082g00006 Petunia axillaris HOM05D002974 ORTHO05D002992 2.9e-07 59.3 48 62.5
Rhsim07G0068200 Rhododendron simsii HOM05D002974 ORTHO05D002992 2.9e-07 59.3 102 44.1
Cfa010941 Carpinus fangiana HOM05D002974 ORTHO05D002992 5.0e-07 58.5 64 48.4
FvH4_7g03520 Fragaria vesca HOM05D002974 ORTHO05D002992 5.0e-07 58.5 83 41.0
FAN06G3677 Fragaria x ananassa HOM05D002974 ORTHO05D002992 5.0e-07 58.5 83 41.0
Manes.11G007000 Manihot esculenta HOM05D002974 ORTHO05D002992 5.0e-07 58.5 143 36.4
Sed0000723 Sechium edule HOM05D002974 ORTHO05D002992 5.0e-07 58.5 51 60.8
EL10Ac2g02772 Beta vulgaris HOM05D012416 ORTHO05D002992 6.5e-07 58.2 55 52.7
ClCG05G026910 Citrullus lanatus HOM05D002974 ORTHO05D002992 6.5e-07 58.2 51 58.8
TWI15G0153 Tripterygium wilfordii HOM05D002974 ORTHO05D002992 6.5e-07 58.2 125 38.4
ECA234G2872 Erigeron canadensis HOM05D002974 ORTHO05D002992 8.5e-07 57.8 122 32.8
Prupe.2G041200 Prunus persica HOM05D002974 ORTHO05D002992 1.5e-06 57.0 56 57.1
Cfa020005 Carpinus fangiana HOM05D002974 ORTHO05D002992 1.9e-06 56.6 55 56.4
Haze_20227 Corylus avellana HOM05D002974 ORTHO05D002992 1.9e-06 56.6 55 56.4
FAN10G2850 Fragaria x ananassa HOM05D002974 ORTHO05D002992 1.9e-06 56.6 110 40.0
Gohir.D04G016200 Gossypium hirsutum HOM05D002974 ORTHO05D002992 1.9e-06 56.6 136 33.8
Gorai.012G018900 Gossypium raimondii HOM05D002974 ORTHO05D002992 1.9e-06 56.6 140 35.0
Medtr3g013980 Medicago truncatula HOM05D002974 ORTHO05D002992 1.9e-06 56.6 90 46.7
Nitab4.5_0005808g0010 Nicotiana tabacum HOM05D002974 ORTHO05D002992 1.9e-06 56.6 59 55.9
Psat5g220360 Pisum sativum HOM05D002974 ORTHO05D002992 1.9e-06 56.6 53 62.3
RcHm_v2.0_Chr1g0325821 Rosa chinensis HOM05D002974 ORTHO05D002992 1.9e-06 56.6 83 42.2
Sc10g0004500 Simmondsia chinensis HOM05D002974 ORTHO05D002992 1.9e-06 56.6 67 50.7
THA.LOC109116532 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 1.9e-06 56.6 127 38.6
Thecc.10G149600 Theobroma cacao HOM05D002974 ORTHO05D002992 1.9e-06 56.6 121 37.2
TAR623G1017 Trochodendron aralioides HOM05D002974 ORTHO05D002992 1.9e-06 56.6 64 53.1
Gohir.A05G399600 Gossypium hirsutum HOM05D002974 ORTHO05D002992 2.5e-06 56.2 58 58.6
THA.LOC104820144 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 2.5e-06 56.2 97 44.3
COL.COLO4_20695 Corchorus olitorius HOM05D003550 ORTHO05D004336 3.2e-06 55.8 62 56.5
Migut.B00886 Erythranthe guttata HOM05D002974 ORTHO05D002992 4.2e-06 55.5 117 37.6
FAN01G3097 Fragaria x ananassa HOM05D002974 ORTHO05D002992 4.2e-06 55.5 110 39.1
Nn2g14777 Nelumbo nucifera HOM05D002974 ORTHO05D002992 4.2e-06 55.5 52 57.7
DCAR_025326 Daucus carota HOM05D002974 ORTHO05D002992 5.5e-06 55.1 39 69.2
QL04p017793 Quercus lobata HOM05D002974 ORTHO05D002992 5.5e-06 55.1 51 56.9
Atru.chr12.1277 Acer truncatum HOM05D002974 ORTHO05D002992 7.2e-06 54.7 143 33.6
FAN03G0828 Fragaria x ananassa HOM05D002974 ORTHO05D002992 7.2e-06 54.7 110 39.1
TPR.G31150 Trifolium pratense HOM05D002974 ORTHO05D002992 7.2e-06 54.7 100 45.0
Lj3g0008937 Lotus japonicus HOM05D002974 ORTHO05D002992 9.4e-06 54.3 52 59.6


User provided reference genes

Program Settings