Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold43G16284 Striga asiatica HOM05D005138 ORTHO05D006318 1.2e-68 263.1 133 100.0
SGA_v2.0_scaffold232G43489 Striga asiatica HOM05D005138 ORTHO05D006318 2.3e-64 248.8 133 94.7
Migut.N01855 Erythranthe guttata HOM05D005138 ORTHO05D006318 1.8e-56 222.6 133 84.2
Gorai.011G218700 Gossypium raimondii HOM05D005138 ORTHO05D006318 3.3e-55 218.4 133 79.7
Duzib128G1035 Durio zibethinus HOM05D005138 ORTHO05D006318 2.2e-54 215.7 133 78.9
PGR044G2178 Punica granatum HOM05D005138 ORTHO05D006318 2.8e-54 215.3 133 79.7
Duzib114G0920 Durio zibethinus HOM05D005138 ORTHO05D006318 6.3e-54 214.2 133 77.4
Gohir.D10G195900 Gossypium hirsutum HOM05D005138 ORTHO05D006318 6.3e-54 214.2 133 77.4
unitig_899.g15579 Utricularia gibba HOM05D005138 ORTHO05D006318 1.8e-53 212.6 133 82.0
CiPaw.14G008900 Carya illinoinensis HOM05D005138 ORTHO05D006318 2.4e-53 212.2 133 77.4
Gohir.A10G188000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 2.4e-53 212.2 133 76.7
Ciclev10002826m.g Citrus clementina HOM05D005138 ORTHO05D006318 5.3e-53 211.1 133 76.7
CiPaw.13G015300 Carya illinoinensis HOM05D005138 ORTHO05D006318 4.5e-52 208.0 131 75.6
Thecc.10G149000 Theobroma cacao HOM05D005138 ORTHO05D006318 5.9e-52 207.6 133 75.2
Sc10g0004520 Simmondsia chinensis HOM05D005138 ORTHO05D006318 5.0e-51 204.5 126 77.8
Manes.11G007200 Manihot esculenta HOM05D005138 ORTHO05D006318 6.5e-51 204.1 133 73.7
DCAR_029715 Daucus carota HOM05D005138 ORTHO05D006318 1.1e-50 203.4 133 73.7
Prupe.2G041500 Prunus persica HOM05D005138 ORTHO05D006318 1.1e-50 203.4 126 78.6
MD07G1047200 Malus domestica HOM05D005138 ORTHO05D006318 1.4e-50 203.0 126 78.6
MSTRG.5074 Avicennia marina HOM05D005138 ORTHO05D006318 1.9e-50 202.6 133 77.4
Sed0002262 Sechium edule HOM05D005138 ORTHO05D006318 1.9e-50 202.6 133 72.2
Actinidia34769 Actinidia chinensis HOM05D005138 ORTHO05D006318 2.5e-50 202.2 129 76.0
CSS0020361 Camellia sinensis var. sinensis HOM05D005138 ORTHO05D006318 2.5e-50 202.2 130 75.4
Hma1.2p1_0837F.1_g226140 Hydrangea macrophylla HOM05D005138 ORTHO05D006318 3.2e-50 201.8 133 72.9
Cfa010943 Carpinus fangiana HOM05D005138 ORTHO05D006318 4.2e-50 201.4 131 72.5
MD02G1279300 Malus domestica HOM05D005138 ORTHO05D006318 4.2e-50 201.4 126 77.8
FAN03G2670 Fragaria x ananassa HOM05D005138 ORTHO05D006318 7.2e-50 200.7 133 72.2
FAN06G4838 Fragaria x ananassa HOM05D005138 ORTHO05D006318 7.2e-50 200.7 133 72.2
Manes.04G157100 Manihot esculenta HOM05D005138 ORTHO05D006318 7.2e-50 200.7 133 72.2
Zm00001eb001400 Zea mays HOM05D005138 ORTHO05D006318 7.2e-50 200.7 133 72.9
arahy.Tifrunner.gnm1.ann1.K7P4IE Arachis hypogaea HOM05D005138 ORTHO05D006318 1.2e-49 199.9 131 71.8
Haze_03004 Corylus avellana HOM05D005138 ORTHO05D006318 1.2e-49 199.9 131 72.5
TAR362G0697 Trochodendron aralioides HOM05D005138 ORTHO05D006318 1.2e-49 199.9 133 73.7
Cpa.g.sc169.49 Carica papaya HOM05D005138 ORTHO05D006318 1.6e-49 199.5 133 72.9
SalBow5G1163 Salvia bowleyana HOM05D005138 ORTHO05D006318 2.1e-49 199.1 172 61.6
Eucgr.G03216 Eucalyptus grandis HOM05D005138 ORTHO05D006318 2.7e-49 198.7 133 72.9
RcHm_v2.0_Chr1g0325871 Rosa chinensis HOM05D005138 ORTHO05D006318 2.7e-49 198.7 133 70.7
MELO3C012486.2 Cucumis melo HOM05D005138 ORTHO05D006318 3.6e-49 198.4 141 70.2
arahy.Tifrunner.gnm1.ann1.EVE7SV Arachis hypogaea HOM05D005138 ORTHO05D006318 4.7e-49 198.0 131 71.0
CDE04G1620 Ceratophyllum demersum HOM05D005138 ORTHO05D006318 4.7e-49 198.0 133 72.9
TWI74G0500 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 4.7e-49 198.0 133 72.2
CANSAT56G0322 Cannabis sativa HOM05D005138 ORTHO05D006318 6.1e-49 197.6 133 70.7
vmacro10390 Vaccinium macrocarpon HOM05D005138 ORTHO05D006318 6.1e-49 197.6 133 69.9
Cc07_g21240 Coffea canephora HOM05D005138 ORTHO05D006318 7.9e-49 197.2 131 71.8
CsaV3_5G036890 Cucumis sativus L. HOM05D005138 ORTHO05D006318 7.9e-49 197.2 128 74.2
THA.LOC104826756 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 7.9e-49 197.2 132 69.7
HanXRQChr11g0341771 Helianthus annuus HOM05D005138 ORTHO05D006318 1.4e-48 196.4 126 73.8
FvH4_7g03540 Fragaria vesca HOM05D005138 ORTHO05D006318 1.8e-48 196.1 133 70.7
Os07g0640100 Oryza sativa ssp. japonica HOM05D005138 ORTHO05D006318 1.8e-48 196.1 131 73.3
PSO384G1335 Papaver somniferum HOM05D005138 ORTHO05D006318 1.8e-48 196.1 133 70.7
FAN10G0593 Fragaria x ananassa HOM05D005138 ORTHO05D006318 2.3e-48 195.7 133 70.7
FAN10G2449 Fragaria x ananassa HOM05D005138 ORTHO05D006318 2.3e-48 195.7 133 70.7
PSO135G0826 Papaver somniferum HOM05D005138 ORTHO05D006318 2.3e-48 195.7 133 70.7
Lsat_1_v5_gn_1_116501 Lactuca sativa HOM05D005138 ORTHO05D006318 3.0e-48 195.3 124 73.4
Atru.chr12.1279 Acer truncatum HOM05D005138 ORTHO05D006318 3.9e-48 194.9 133 68.4
Dinv44706 Davidia involucrata HOM05D005138 ORTHO05D006318 3.9e-48 194.9 131 71.0
Ca_23972_v3 Cicer arietinum L. HOM05D005138 ORTHO05D006318 6.7e-48 194.1 132 71.2
TWI38G0338 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 6.7e-48 194.1 132 68.2
ATR1096G082 Amborella trichopoda HOM05D005138 ORTHO05D006318 8.8e-48 193.7 131 71.0
HPP92_021197 Vanilla planifolia HOM05D005138 ORTHO05D006318 8.8e-48 193.7 136 71.3
Hund13385 Selenicereus undatus HOM05D005138 ORTHO05D006318 1.1e-47 193.4 125 74.4
MBI13_g09225_MAGBIO Magnolia biondii HOM05D005138 ORTHO05D006318 1.5e-47 193.0 133 71.4
Aa31LG3G6480 Aethionema arabicum HOM05D005138 ORTHO05D006318 2.6e-47 192.2 130 72.3
BcaB04g18689 Brassica carinata HOM05D005138 ORTHO05D006318 3.3e-47 191.8 130 71.5
AUR62031745 Chenopodium quinoa HOM05D005138 ORTHO05D006318 4.4e-47 191.4 125 72.0
AUR62032630 Chenopodium quinoa HOM05D005138 ORTHO05D006318 4.4e-47 191.4 125 72.0
BcaC09g48226 Brassica carinata HOM05D005138 ORTHO05D006318 7.4e-47 190.7 130 70.8
A03p37550 Brassica napus HOM05D005138 ORTHO05D006318 7.4e-47 190.7 130 70.8
C01p53060 Brassica napus HOM05D005138 ORTHO05D006318 7.4e-47 190.7 130 70.8
C03p45540 Brassica napus HOM05D005138 ORTHO05D006318 7.4e-47 190.7 130 70.8
Thhalv10021751m.g Eutrema salsugineum HOM05D005138 ORTHO05D006318 9.7e-47 190.3 130 69.2
Nitab4.5_0010402g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 9.7e-47 190.3 131 70.2
Medtr8g040150 Medicago truncatula HOM05D005138 ORTHO05D006318 1.7e-46 189.5 132 67.4
QL04p018722 Quercus lobata HOM05D005138 ORTHO05D006318 1.7e-46 189.5 132 68.9
PGSC0003DMG400004276 Solanum tuberosum HOM05D005138 ORTHO05D006318 2.2e-46 189.1 133 67.7
Ah.10g030100 Amaranthus hybridus HOM05D005138 ORTHO05D006318 2.8e-46 188.7 125 72.8
CARHR086810 Cardamine hirsuta HOM05D005138 ORTHO05D006318 2.8e-46 188.7 130 69.2
Psat4g099920 Pisum sativum HOM05D005138 ORTHO05D006318 2.8e-46 188.7 132 67.4
Sp3g10480 Schrenkiella parvula HOM05D005138 ORTHO05D006318 2.8e-46 188.7 130 69.2
Ah.12g059980 Amaranthus hybridus HOM05D005138 ORTHO05D006318 3.7e-46 188.3 131 71.8
AL3G23920 Arabidopsis lyrata HOM05D005138 ORTHO05D006318 4.8e-46 188.0 130 68.5
AT3G12260 Arabidopsis thaliana HOM05D005138 ORTHO05D006318 4.8e-46 188.0 130 68.5
Carub.0003s1162 Capsella rubella HOM05D005138 ORTHO05D006318 6.3e-46 187.6 130 68.5
THA.LOC104799320 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 8.2e-46 187.2 132 68.2
TPR.G8538 Trifolium pratense HOM05D005138 ORTHO05D006318 3.1e-45 185.3 132 66.7
Aqoxy2G00421 Aquilegia oxysepala HOM05D005138 ORTHO05D006318 5.3e-45 184.5 131 69.5
BolC3t16831H Brassica oleracea HOM05D005138 ORTHO05D006318 7.0e-45 184.1 139 66.9
EL10Ac2g02769 Beta vulgaris HOM05D005138 ORTHO05D000392 9.1e-45 183.7 129 67.4
Sabra01G0021400 Salix brachista HOM05D005138 ORTHO05D006318 9.1e-45 183.7 132 65.9
Lalb_Chr03g0032141 Lupinus albus HOM05D005138 ORTHO05D006318 1.5e-44 183.0 133 67.7
BraA03t12909Z Brassica rapa HOM05D005138 ORTHO05D006318 2.0e-44 182.6 140 65.7
Hund15745 Selenicereus undatus HOM05D005138 ORTHO05D006318 2.0e-44 182.6 133 69.2
Solyc01g022750.3 Solanum lycopersicum HOM05D005138 ORTHO05D006318 2.0e-44 182.6 131 66.4
Sopen01g016660 Solanum pennellii HOM05D005138 ORTHO05D006318 2.0e-44 182.6 131 66.4
C05p55530 Brassica napus HOM05D005138 ORTHO05D006318 3.5e-44 181.8 139 64.7
Nitab4.5_0004389g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 3.5e-44 181.8 158 58.9
BolC1t05249H Brassica oleracea HOM05D005138 ORTHO05D006318 4.5e-44 181.4 143 64.3
VMungo1127G1184 Vigna mungo HOM05D005138 ORTHO05D006318 4.5e-44 181.4 133 65.4
Potri.001G029900 Populus trichocarpa HOM05D005138 ORTHO05D006318 5.9e-44 181.0 132 65.2
CAN.G1362.7 Capsicum annuum HOM05D005138 ORTHO05D006318 7.7e-44 180.6 127 69.3
BolC5t34219H Brassica oleracea HOM05D005138 ORTHO05D006318 1.0e-43 180.3 139 64.0
Glyma.15G231900 Glycine max HOM05D005138 ORTHO05D006318 1.0e-43 180.3 131 66.4
Lj3g0022103 Lotus japonicus HOM05D005138 ORTHO05D006318 1.3e-43 179.9 134 66.4
A05p37100 Brassica napus HOM05D005138 ORTHO05D006318 2.2e-43 179.1 137 64.2
BraA05t22507Z Brassica rapa HOM05D005138 ORTHO05D006318 2.2e-43 179.1 137 64.2
Phvul.011G203300 Phaseolus vulgaris HOM05D005138 ORTHO05D006318 3.8e-43 178.3 133 65.4
Glyma.09G091002 Glycine max HOM05D005138 ORTHO05D006318 3.2e-42 175.3 131 64.9
Glyma.13G193600 Glycine max HOM05D005138 ORTHO05D006318 4.2e-42 174.9 131 64.9
Aqoxy2G00420 Aquilegia oxysepala HOM05D000001 ORTHO05D007291 7.2e-42 174.1 129 67.4
Peaxi162Scf00062g02216 Petunia axillaris HOM05D005138 ORTHO05D006318 7.4e-39 164.1 133 63.9
Nitab4.5_0000254g0180 Nicotiana tabacum HOM05D005138 ORTHO05D006318 5.3e-37 157.9 131 63.4
ECA248G2587 Erigeron canadensis HOM05D005138 ORTHO05D006318 3.5e-36 155.2 97 77.3
Peaxi162Scf01042g00115 Petunia axillaris HOM05D005138 ORTHO05D006318 3.6e-33 145.2 131 57.3
GSVIVG01036643001 Vitis vinifera HOM05D005138 ORTHO05D006318 8.0e-33 144.1 95 72.6
Pp3c1_37620 Physcomitrium patens HOM05D005138 ORTHO05D006318 1.4e-32 143.3 136 55.1
Pp3c2_3180 Physcomitrium patens HOM05D005138 ORTHO05D006318 2.3e-32 142.5 136 55.1
Actinidia38920 Actinidia chinensis HOM05D005138 ORTHO05D006318 4.0e-32 141.7 127 59.8
Mapoly0055s0110 Marchantia polymorpha HOM05D005138 ORTHO05D006318 1.5e-31 139.8 123 55.3
PGSC0003DMG400005271 Solanum tuberosum HOM05D005138 ORTHO05D006318 6.3e-30 134.4 93 68.8
CBR_g52457 Chara braunii HOM05D005138 ORTHO05D006318 1.2e-28 130.2 125 50.4
ClCG00G004230 Citrullus lanatus HOM05D005138 ORTHO05D006318 3.7e-22 108.6 62 82.3
ClCG05G026940 Citrullus lanatus HOM05D005138 ORTHO05D006318 3.7e-22 108.6 62 82.3
COL.COLO4_20705 Corchorus olitorius HOM05D005138 ORTHO05D006318 3.7e-22 108.6 62 80.6
Gorai.004G120800 Gossypium raimondii HOM05D005138 ORTHO05D006318 6.3e-22 107.8 75 70.7
COL.COLO4_20706 Corchorus olitorius HOM05D005138 ORTHO05D006318 1.8e-21 106.3 71 71.8
ClCG05G026950 Citrullus lanatus HOM05D005138 ORTHO05D006318 4.1e-21 105.1 76 67.1
Gohir.A10G188200 Gossypium hirsutum HOM05D005138 ORTHO05D006318 5.4e-21 104.8 75 69.3
SMO364G0517 Selaginella moellendorffii HOM05D005138 ORTHO05D006318 9.1e-21 104.0 118 42.4
Rhsim09G0131900 Rhododendron simsii HOM05D005138 ORTHO05D006318 1.2e-20 103.6 72 66.7
Nn7g36804 Nelumbo nucifera HOM05D005138 ORTHO05D006318 1.6e-20 103.2 65 78.5
Lj2A602G38 Lonicera japonica HOM05D005138 ORTHO05D006318 2.0e-20 102.8 71 64.8
Gohir.D03G123000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 4.5e-20 101.7 71 70.4
MD07G1046900 Malus domestica HOM05D005138 ORTHO05D006318 5.9e-20 101.3 62 75.8
BcaC01g04057 Brassica carinata HOM05D005138 ORTHO05D006318 1.0e-19 100.5 69 68.1
Lalb_Chr19g0132971 Lupinus albus HOM05D005138 ORTHO05D006318 2.3e-19 99.4 76 65.8
PGSC0003DMG401025557 Solanum tuberosum HOM05D005138 ORTHO05D006318 2.9e-19 99.0 72 65.3
CAN.G575.4 Capsicum annuum HOM05D005138 ORTHO05D006318 6.6e-19 97.8 77 59.7
RcHm_v2.0_Chr1g0325941 Rosa chinensis HOM05D005138 ORTHO05D006318 4.2e-18 95.1 69 66.7
Oeu064133.1 Olea europaea HOM05D005138 ORTHO05D006318 1.8e-16 89.7 53 79.2
Lalb_Chr19g0132981 Lupinus albus HOM05D005138 ORTHO05D006318 1.5e-15 86.7 64 65.6
MCO10G366 Micromonas commoda HOM05D005138 ORTHO05D006318 2.0e-12 76.3 116 34.5
SEGI_36145 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 2.9e-11 72.4 74 48.6
AUR62042115 Chenopodium quinoa HOM05D005138 ORTHO05D006318 6.6e-11 71.2 50 66.0
Atru.chr10.1194 Acer truncatum HOM05D005527 ORTHO05D006480 2.5e-10 69.3 77 48.1
VMungo0464G2031 Vigna mungo HOM05D005138 ORTHO05D011906 9.5e-10 67.4 58 55.2
Cre12.g555250 Chlamydomonas reinhardtii HOM05D005138 ORTHO05D006318 1.2e-07 60.5 105 29.5
PRCOL_00003180 Prasinoderma coloniale HOM05D000737 ORTHO05D000581 2.2e-06 56.2 104 28.8
SEGI_02182 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 3.7e-06 55.5 74 32.4
PGSC0003DMG400003395 Solanum tuberosum HOM05D005138 ORTHO05D006318 4.9e-06 55.1 53 49.1


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