Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold43G16234 Striga asiatica HOM05D009542 ORTHO05D402718 5.4e-153 544.3 269 100.0
SGA_v2.0_scaffold112G31661 Striga asiatica HOM05D009542 ORTHO05D030322 1.1e-73 280.8 159 88.7
SGA_v2.0_scaffold555G52903 Striga asiatica HOM05D009542 ORTHO05D030322 1.1e-73 280.8 159 88.7
Os01g0776800 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D030322 1.7e-45 187.2 194 52.1
Os07g0258000 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D301337 2.4e-36 156.8 153 54.9
Os06g0489900 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D297815 1.4e-23 114.4 140 48.6
Os10g0458300 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D297170 2.5e-17 93.6 163 38.7
Os05g0332250 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D296551 8.0e-16 88.6 146 42.5
Os02g0113800 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D301000 1.2e-14 84.7 160 35.0
Os02g0113300 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D301167 5.8e-14 82.4 157 35.0
Os03g0179200 Oryza sativa ssp. japonica HOM05D032120 ORTHO05D295265 9.2e-12 75.1 107 39.3
Os06g0720700 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D299104 9.2e-12 75.1 116 44.0
Os06g0719600 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D295390 1.2e-11 74.7 116 44.0
Os06g0720400 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294711 1.2e-11 74.7 116 44.0
Os06g0722100 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D293739 1.2e-11 74.7 116 44.0
Os06g0722450 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D293796 1.2e-11 74.7 116 44.0
Os06g0722700 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D297080 1.2e-11 74.7 116 44.0
Os06g0723900 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D301154 1.2e-11 74.7 116 44.0
SGA_v2.0_scaffold5524G54649 Striga asiatica HOM05D009542 ORTHO05D030322 2.0e-11 73.9 35 100.0
Os02g0492500 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D298169 3.3e-09 66.6 125 36.8
Os09g0567000 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D297207 3.6e-08 63.2 98 42.9
Os04g0388000 Oryza sativa ssp. japonica HOM05D032120 ORTHO05D300183 1.4e-07 61.2 125 35.2
Os03g0173700 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D301692 5.2e-07 59.3 129 35.7
Os04g0380500 Oryza sativa ssp. japonica HOM05D032120 ORTHO05D295416 8.9e-07 58.5 130 36.2
Os02g0113900 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294256 5.8e-06 55.8 74 40.5
Os05g0548700 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D295144 9.9e-06 55.1 152 31.6


User provided reference genes

Program Settings