Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold43G16217 Striga asiatica HOM05D005408 ORTHO05D006790 0.0e+00 1889.8 960 100.0
MSTRG.21921 Avicennia marina HOM05D005408 ORTHO05D006790 2.0e-303 1045.8 959 60.9
Migut.N00286 Erythranthe guttata HOM05D005408 ORTHO05D006790 8.2e-297 1023.8 957 58.7
SalBow3G0714 Salvia bowleyana HOM05D005408 ORTHO05D006790 1.1e-288 996.9 956 59.8
Oeu002940.1 Olea europaea HOM05D005408 ORTHO05D006790 1.0e-262 910.6 953 54.9
Oeu005084.1 Olea europaea HOM05D005408 ORTHO05D006790 3.1e-251 872.5 961 53.9
Dinv27073 Davidia involucrata HOM05D005408 ORTHO05D006790 1.9e-245 853.2 1011 52.3
Actinidia20821 Actinidia chinensis HOM05D005408 ORTHO05D006790 1.7e-241 840.1 994 52.0
Dinv29839 Davidia involucrata HOM05D005408 ORTHO05D006790 7.8e-239 831.2 971 52.1
Prupe.1G042300 Prunus persica HOM05D005408 ORTHO05D006790 1.6e-236 823.5 994 50.7
TAR633G1608 Trochodendron aralioides HOM05D005408 ORTHO05D006790 2.2e-233 813.1 1012 48.6
MD16G1222000 Malus domestica HOM05D005408 ORTHO05D006790 8.4e-233 811.2 986 48.9
Peaxi162Scf00392g00730 Petunia axillaris HOM05D005408 ORTHO05D006790 5.4e-232 808.5 1015 48.7
Ciclev10004264m.g Citrus clementina HOM05D005408 ORTHO05D006790 3.0e-230 802.7 975 50.8
CSS0047984 Camellia sinensis var. sinensis HOM05D005408 ORTHO05D006790 3.9e-230 802.4 1017 48.8
CAN.G220.39 Capsicum annuum HOM05D005408 ORTHO05D006790 6.6e-230 801.6 1036 48.5
Sopen09g033240 Solanum pennellii HOM05D005408 ORTHO05D006790 1.5e-229 800.4 1035 48.5
Thecc.04G259100 Theobroma cacao HOM05D005408 ORTHO05D006790 3.3e-229 799.3 975 49.4
Solyc09g090340.3 Solanum lycopersicum HOM05D005408 ORTHO05D006790 1.3e-228 797.3 1035 48.7
CiPaw.02G109300 Carya illinoinensis HOM05D005408 ORTHO05D006790 1.6e-228 797.0 982 49.4
GSVIVG01027854001 Vitis vinifera HOM05D005408 ORTHO05D006790 8.1e-228 794.7 975 49.6
PGSC0003DMG400017212 Solanum tuberosum HOM05D005408 ORTHO05D006790 1.4e-227 793.9 1034 48.4
Haze_11418 Corylus avellana HOM05D005408 ORTHO05D006790 9.0e-227 791.2 985 48.9
Manes.15G043200 Manihot esculenta HOM05D005408 ORTHO05D006790 2.6e-226 789.6 990 47.8
Duzib212G0761 Durio zibethinus HOM05D005408 ORTHO05D006790 2.2e-225 786.6 970 49.5
MD13G1216600 Malus domestica HOM05D005408 ORTHO05D006790 2.9e-225 786.2 992 48.6
TAR362G0279 Trochodendron aralioides HOM05D005408 ORTHO05D006790 2.9e-225 786.2 1005 48.8
Lj3A679T38 Lonicera japonica HOM05D005408 ORTHO05D006790 8.4e-225 784.6 1004 49.2
vmacro15459 Vaccinium macrocarpon HOM05D005408 ORTHO05D006790 1.9e-224 783.5 1105 47.2
CSS0016984 Camellia sinensis var. sinensis HOM05D005408 ORTHO05D006790 5.4e-224 781.9 992 49.1
Cc03_g05790 Coffea canephora HOM05D005408 ORTHO05D006790 5.4e-224 781.9 1039 48.9
FAN12G0827 Fragaria x ananassa HOM05D005408 ORTHO05D006790 1.2e-223 780.8 957 49.8
TWI53G1583 Tripterygium wilfordii HOM05D005408 ORTHO05D006790 1.8e-222 776.9 987 47.2
Lj3A684T25 Lonicera japonica HOM05D005408 ORTHO05D006790 3.0e-222 776.2 1007 49.1
Cfa014743 Carpinus fangiana HOM05D005408 ORTHO05D006790 6.7e-222 775.0 981 48.5
Atru.chr4.2004 Acer truncatum HOM05D005408 ORTHO05D006790 8.7e-222 774.6 966 49.2
FvH4_4g04020 Fragaria vesca HOM05D005408 ORTHO05D006790 1.1e-221 774.2 957 49.5
Nitab4.5_0000596g0060 Nicotiana tabacum HOM05D005408 ORTHO05D006790 1.1e-221 774.2 1099 45.0
Duzib151G0888 Durio zibethinus HOM05D005408 ORTHO05D006790 3.3e-221 772.7 974 49.4
EL10Ac3g04981 Beta vulgaris HOM05D005408 ORTHO05D006790 1.6e-220 770.4 981 48.0
Sc19g0003230 Simmondsia chinensis HOM05D005408 ORTHO05D006790 2.1e-220 770.0 978 48.2
QL06p019224 Quercus lobata HOM05D005408 ORTHO05D006790 2.8e-220 769.6 972 49.4
RcHm_v2.0_Chr4g0394291 Rosa chinensis HOM05D005408 ORTHO05D006790 2.8e-220 769.6 973 48.9
DCAR_024278 Daucus carota HOM05D005408 ORTHO05D006790 3.7e-220 769.2 992 49.1
COL.COLO4_15917 Corchorus olitorius HOM05D005408 ORTHO05D006790 8.1e-220 768.1 974 49.3
Nitab4.5_0000044g0530 Nicotiana tabacum HOM05D005408 ORTHO05D006790 8.1e-220 768.1 1035 47.4
SGA_v2.0_scaffold101G29731 Striga asiatica HOM05D005408 ORTHO05D006790 4.0e-219 765.8 955 50.4
Rhsim02G0041600 Rhododendron simsii HOM05D005408 ORTHO05D006790 1.2e-218 764.2 1143 44.2
FAN17G2537 Fragaria x ananassa HOM05D005408 ORTHO05D006790 2.6e-218 763.1 963 48.9
Migut.G00502 Erythranthe guttata HOM05D005408 ORTHO05D006790 3.4e-218 762.7 948 50.9
Potri.010G069200 Populus trichocarpa HOM05D005408 ORTHO05D006790 3.8e-217 759.2 974 48.4
Nn1g02867 Nelumbo nucifera HOM05D005408 ORTHO05D006790 6.4e-217 758.4 1035 45.6
Manes.15G043300 Manihot esculenta HOM05D005408 ORTHO05D006790 8.4e-217 758.1 976 49.4
Gohir.A02G040500 Gossypium hirsutum HOM05D005408 ORTHO05D006790 1.9e-216 756.9 985 47.0
Gohir.D02G046500 Gossypium hirsutum HOM05D005408 ORTHO05D006790 2.4e-216 756.5 977 47.6
Potri.008G169200 Populus trichocarpa HOM05D005408 ORTHO05D006790 4.2e-216 755.7 972 48.0
TWI09G0385 Tripterygium wilfordii HOM05D005408 ORTHO05D006790 5.1e-214 748.8 970 47.2
CANSAT54G2691 Cannabis sativa HOM05D005408 ORTHO05D006790 1.5e-213 747.3 976 47.7
Eucgr.H03018 Eucalyptus grandis HOM05D005408 ORTHO05D006790 5.6e-213 745.3 976 47.8
ClCG05G004200 Citrullus lanatus HOM05D005408 ORTHO05D006790 1.6e-212 743.8 1006 46.6
Hund03055 Selenicereus undatus HOM05D005408 ORTHO05D006790 1.6e-212 743.8 978 46.6
CsaV3_3G011930 Cucumis sativus L. HOM05D005408 ORTHO05D006790 8.2e-212 741.5 998 46.2
MELO3C006406.2 Cucumis melo HOM05D005408 ORTHO05D006790 1.8e-211 740.3 998 47.2
Aqoxy5G00183 Aquilegia oxysepala HOM05D005408 ORTHO05D006790 1.2e-210 737.6 1012 46.6
MBI07_g31083_MAGBIO Magnolia biondii HOM05D005408 ORTHO05D006790 2.9e-209 733.0 999 45.8
Sabra08G0129000 Salix brachista HOM05D005408 ORTHO05D006790 4.9e-209 732.3 986 47.5
CARHR220500 Cardamine hirsuta HOM05D005408 ORTHO05D006790 6.5e-209 731.9 941 47.3
Hma1.2p1_0112F.1_g054305 Hydrangea macrophylla HOM05D005408 ORTHO05D006790 1.1e-208 731.1 668 58.2
AUR62015544 Chenopodium quinoa HOM05D005408 ORTHO05D006790 7.1e-208 728.4 982 47.4
MSTRG.4147 Avicennia marina HOM05D005408 ORTHO05D006790 1.6e-207 727.2 945 48.0
CiPaw.01G181400 Carya illinoinensis HOM05D005408 ORTHO05D006790 1.3e-206 724.2 982 47.0
PGR004G2334 Punica granatum HOM05D005408 ORTHO05D006790 6.7e-206 721.8 963 47.0
Sabra10G0037900 Salix brachista HOM05D005408 ORTHO05D006790 6.7e-206 721.8 979 46.9
Cpa.g.sc44.32 Carica papaya HOM05D005408 ORTHO05D006790 1.1e-205 721.1 986 46.5
Aa31LG9G3050 Aethionema arabicum HOM05D005408 ORTHO05D006790 1.9e-205 720.3 974 44.9
Gorai.005G051300 Gossypium raimondii HOM05D005408 ORTHO05D006790 1.9e-205 720.3 921 48.1
AL7G41950 Arabidopsis lyrata HOM05D005408 ORTHO05D006790 3.3e-205 719.5 910 48.8
Sed0026902 Sechium edule HOM05D005408 ORTHO05D006790 9.7e-205 718.0 958 46.7
Sp7g12340 Schrenkiella parvula HOM05D005408 ORTHO05D006790 1.3e-204 717.6 975 46.1
FAN22G0039 Fragaria x ananassa HOM05D005408 ORTHO05D006790 2.8e-204 716.5 1003 46.3
ECA248G0134 Erigeron canadensis HOM05D005408 ORTHO05D006790 6.3e-204 715.3 943 48.5
AT4G14310 Arabidopsis thaliana HOM05D005408 ORTHO05D006790 2.4e-203 713.4 932 47.6
Carub.0007s2798 Capsella rubella HOM05D005408 ORTHO05D006790 4.1e-203 712.6 972 46.2
HanXRQChr11g0330791 Helianthus annuus HOM05D005408 ORTHO05D006790 4.1e-203 712.6 996 46.4
Lalb_Chr03g0037341 Lupinus albus HOM05D005408 ORTHO05D006790 3.4e-202 709.5 985 45.9
AUR62002164 Chenopodium quinoa HOM05D005408 ORTHO05D006790 1.3e-201 707.6 1007 46.0
Lsat_1_v5_gn_1_74661 Lactuca sativa HOM05D005408 ORTHO05D006790 2.2e-201 706.8 990 46.3
Thhalv10024359m.g Eutrema salsugineum HOM05D005408 ORTHO05D006790 5.0e-201 705.7 978 45.2
arahy.Tifrunner.gnm1.ann1.HQEG75 Arachis hypogaea HOM05D005408 ORTHO05D006790 1.1e-200 704.5 674 56.5
Lj6g0021221 Lotus japonicus HOM05D005408 ORTHO05D006790 3.2e-200 703.0 675 56.3
PSO832G1937 Papaver somniferum HOM05D005408 ORTHO05D006790 5.5e-200 702.2 1005 45.4
THA.LOC104804761 Tarenaya hassleriana HOM05D005408 ORTHO05D006790 2.1e-199 700.3 975 44.9
PSO210G0343 Papaver somniferum HOM05D005408 ORTHO05D006790 5.1e-198 695.7 965 45.7
THA.LOC104822240 Tarenaya hassleriana HOM05D005408 ORTHO05D006790 1.1e-197 694.5 984 45.1
arahy.Tifrunner.gnm1.ann1.NA4LRU Arachis hypogaea HOM05D005408 ORTHO05D006790 7.4e-197 691.8 796 50.6
BcaNung06103 Brassica carinata HOM05D005408 ORTHO05D006790 5.3e-195 685.6 972 45.1
Medtr1g041685 Medicago truncatula HOM05D005408 ORTHO05D006790 6.5e-193 678.7 669 54.4
TPR.G25189 Trifolium pratense HOM05D005408 ORTHO05D006790 6.5e-193 678.7 704 54.0
Phvul.007G275400 Phaseolus vulgaris HOM05D005408 ORTHO05D006790 5.5e-192 675.6 667 54.9
Ca_03010_v3 Cicer arietinum L. HOM05D005408 ORTHO05D006790 9.4e-192 674.9 683 55.2
Psat6g104520 Pisum sativum HOM05D005408 ORTHO05D006790 9.4e-192 674.9 705 53.8
Glyma.02G003800 Glycine max HOM05D005408 ORTHO05D006790 2.7e-191 673.3 674 55.0
C03p76860 Brassica napus HOM05D005408 ORTHO05D006790 3.0e-190 669.8 971 44.5
VMungo0720G1073 Vigna mungo HOM05D005408 ORTHO05D006790 9.7e-189 664.8 675 53.5
BcaC01g00205 Brassica carinata HOM05D005408 ORTHO05D006790 1.4e-187 661.0 968 43.5
Glyma.10G004700 Glycine max HOM05D005408 ORTHO05D006790 1.4e-187 661.0 689 53.4
A08p24350 Brassica napus HOM05D005408 ORTHO05D006790 1.7e-185 654.1 967 43.7
HanXRQChr01g0023201 Helianthus annuus HOM05D005408 ORTHO05D006790 2.7e-183 646.7 977 43.6
BolC3t19941H Brassica oleracea HOM05D005408 ORTHO05D006790 3.6e-183 646.4 987 42.7
BraA08t34390Z Brassica rapa HOM05D005408 ORTHO05D006790 2.8e-180 636.7 994 42.7
Zm00001eb258510 Zea mays HOM05D005408 ORTHO05D006790 3.3e-173 613.2 677 49.6
ATR0736G089 Amborella trichopoda HOM05D005408 ORTHO05D006790 1.4e-171 607.8 725 49.7
Zm00001eb191660 Zea mays HOM05D005408 ORTHO05D006790 5.3e-171 605.9 679 49.2
CDE04G2551 Ceratophyllum demersum HOM05D005408 ORTHO05D006790 6.1e-167 592.4 1041 40.5
CDE07G1006 Ceratophyllum demersum HOM05D005408 ORTHO05D006790 1.4e-163 581.3 1000 40.7
unitig_736.g22443 Utricularia gibba HOM05D005408 ORTHO05D006790 2.9e-153 547.0 712 46.9
SEGI_14734 Sequoiadendron giganteum HOM05D005408 ORTHO05D006790 4.3e-144 516.5 695 44.2
Ah.13g072600 Amaranthus hybridus HOM05D005408 ORTHO05D006790 1.9e-131 474.6 743 44.4
HPP92_008326 Vanilla planifolia HOM05D005408 ORTHO05D006790 1.3e-121 441.8 797 38.8
TPR.G25191 Trifolium pratense HOM05D005408 ORTHO05D006790 2.4e-115 421.0 657 40.0
Mapoly0063s0094 Marchantia polymorpha HOM05D005408 ORTHO05D006790 2.1e-95 354.8 656 34.3
Pp3c16_10130 Physcomitrium patens HOM05D005408 ORTHO05D006790 2.8e-95 354.4 495 39.4
Pp3c25_7300 Physcomitrium patens HOM05D005408 ORTHO05D006790 1.0e-89 335.9 749 32.2
Os02g0809900 Oryza sativa ssp. japonica HOM05D005408 ORTHO05D006790 1.9e-88 331.6 307 54.1
AagrBONN_evm.TU.Sc2ySwM_228.3605 Anthoceros agrestis HOM05D005408 ORTHO05D006790 7.4e-88 329.7 493 37.3
SalBow8G3468 Salvia bowleyana HOM05D005408 ORTHO05D006790 3.3e-35 154.8 117 67.5
SalBow7G4774 Salvia bowleyana HOM05D005408 ORTHO05D006790 6.1e-34 150.6 117 67.5
CBR_g30942 Chara braunii HOM05D005408 ORTHO05D006790 6.8e-25 120.6 371 26.7
Hund11908 Selenicereus undatus HOM05D005408 ORTHO05D006790 6.6e-20 104.0 147 44.9
Rhsim02G0041700 Rhododendron simsii HOM05D005408 ORTHO05D006790 1.1e-17 96.7 176 36.4
CiPaw.06G041800 Carya illinoinensis HOM05D005408 ORTHO05D006790 7.6e-16 90.5 356 32.3
C04p41430 Brassica napus HOM05D005408 ORTHO05D006790 1.3e-12 79.7 130 41.5
BolC4t25724H Brassica oleracea HOM05D005408 ORTHO05D006790 1.7e-12 79.3 130 41.5
BolC4t25725H Brassica oleracea HOM05D005408 ORTHO05D006790 1.1e-09 70.1 101 42.6
C04p41440 Brassica napus HOM05D005408 ORTHO05D006790 4.4e-08 64.7 101 41.6
SGA_v2.0_scaffold57G20265 Striga asiatica HOM05D005408 ORTHO05D006790 2.2e-07 62.4 83 47.0
A04p07780 Brassica napus HOM05D005408 ORTHO05D006790 1.1e-06 60.1 82 47.6
BcaC02g09333 Brassica carinata HOM05D005408 ORTHO05D006790 7.1e-06 57.4 53 60.4


User provided reference genes

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