Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold43G16209 Striga asiatica HOM05D006612 ORTHO05D009014 4.0e-176 621.3 311 100.0
SGA_v2.0_scaffold116G32287 Striga asiatica HOM05D006612 ORTHO05D009014 2.3e-155 552.4 309 91.3
SGA_v2.0_scaffold187G40262 Striga asiatica HOM05D006612 ORTHO05D009014 6.5e-118 427.9 417 56.8
SGA_v2.0_scaffold19G08855 Striga asiatica HOM05D006612 ORTHO05D009014 8.4e-118 427.6 313 75.4
SGA_v2.0_scaffold169G38616 Striga asiatica HOM05D006612 ORTHO05D009014 8.5e-102 374.4 248 75.0
SGA_v2.0_scaffold37G14810 Striga asiatica HOM05D006612 ORTHO05D009014 1.9e-101 373.2 248 74.2
SGA_v2.0_scaffold83G26370 Striga asiatica HOM05D006612 ORTHO05D009014 1.9e-101 373.2 248 74.2
SGA_v2.0_scaffold123G33418 Striga asiatica HOM05D006612 ORTHO05D009014 6.7e-99 364.8 423 51.3
SGA_v2.0_scaffold154G37090 Striga asiatica HOM05D006612 ORTHO05D009014 2.5e-69 266.5 375 41.3
SGA_v2.0_scaffold511G52629 Striga asiatica HOM05D006612 ORTHO05D009014 2.8e-68 263.1 428 37.6
SGA_v2.0_scaffold121G33153 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-66 257.7 450 36.4
SGA_v2.0_scaffold15G07247 Striga asiatica HOM05D006612 ORTHO05D009014 2.2e-65 253.4 365 39.5
SGA_v2.0_scaffold107G30792 Striga asiatica HOM05D006612 ORTHO05D009014 5.4e-64 248.8 318 49.1
SGA_v2.0_scaffold135G34887 Striga asiatica HOM05D006612 ORTHO05D009014 7.0e-64 248.4 245 51.4
SGA_v2.0_scaffold9G04714 Striga asiatica HOM05D006612 ORTHO05D009014 7.8e-63 245.0 377 40.8
SGA_v2.0_scaffold41G15809 Striga asiatica HOM05D006612 ORTHO05D009014 2.3e-62 243.4 243 54.7
SGA_v2.0_scaffold10G05367 Striga asiatica HOM05D006612 ORTHO05D009014 7.3e-61 238.4 231 49.8
SGA_v2.0_scaffold144G35923 Striga asiatica HOM05D006612 ORTHO05D009014 8.0e-60 235.0 247 49.4
SGA_v2.0_scaffold346G49531 Striga asiatica HOM05D006612 ORTHO05D009014 6.0e-55 218.8 255 46.7
SGA_v2.0_scaffold1G00025 Striga asiatica HOM05D006612 ORTHO05D009014 1.5e-50 204.1 368 38.9
SGA_v2.0_scaffold263G45988 Striga asiatica HOM05D006612 ORTHO05D009014 7.8e-47 191.8 249 44.6
SGA_v2.0_scaffold2648G54169 Striga asiatica HOM05D006612 ORTHO05D009014 5.6e-45 185.7 386 37.3
SGA_v2.0_scaffold134G34702 Striga asiatica HOM05D006612 ORTHO05D009014 2.7e-39 166.8 133 65.4
SGA_v2.0_scaffold705G53488 Striga asiatica HOM05D006612 ORTHO05D009014 5.6e-37 159.1 257 33.5
SGA_v2.0_scaffold146G36211 Striga asiatica HOM05D006612 ORTHO05D009014 3.6e-36 156.4 281 38.1
SGA_v2.0_scaffold188G40334 Striga asiatica HOM05D006612 ORTHO05D009014 3.4e-34 149.8 469 29.4
SGA_v2.0_scaffold213G42222 Striga asiatica HOM05D006612 ORTHO05D009014 4.9e-33 146.0 225 37.8
SGA_v2.0_scaffold87G27099 Striga asiatica HOM05D031284 ORTHO05D009014 5.4e-32 142.5 365 29.6
SGA_v2.0_scaffold1G00207 Striga asiatica HOM05D006612 ORTHO05D009014 1.4e-27 127.9 329 27.4
SGA_v2.0_scaffold90G27630 Striga asiatica HOM05D006612 ORTHO05D009014 6.4e-25 119.0 289 29.1
SGA_v2.0_scaffold46G17404 Striga asiatica HOM05D006612 ORTHO05D009014 8.4e-25 118.6 434 29.5
SGA_v2.0_scaffold181G39686 Striga asiatica HOM05D006612 ORTHO05D009014 4.2e-24 116.3 187 31.6
SGA_v2.0_scaffold1973G54063 Striga asiatica HOM05D006612 ORTHO05D009014 2.1e-23 114.0 159 35.8
SGA_v2.0_scaffold24G10399 Striga asiatica HOM05D006612 ORTHO05D009014 7.9e-23 112.1 87 63.2
SGA_v2.0_scaffold579G53032 Striga asiatica HOM05D006612 ORTHO05D009014 3.3e-21 106.7 87 70.1
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 5.6e-21 105.9 251 27.1
Cc08_g06650 Coffea canephora HOM05D006612 ORTHO05D009014 5.6e-21 105.9 242 28.5
SGA_v2.0_scaffold52G19153 Striga asiatica HOM05D006612 ORTHO05D009014 7.3e-21 105.5 115 45.2
SGA_v2.0_scaffold20G09078 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-20 104.4 241 27.0
SGA_v2.0_scaffold66G22505 Striga asiatica HOM05D000096 ORTHO05D000045 2.1e-20 104.0 241 26.6
SGA_v2.0_scaffold35G14178 Striga asiatica HOM05D006612 ORTHO05D009014 2.8e-20 103.6 208 28.8
SGA_v2.0_scaffold10G05328 Striga asiatica HOM05D006612 ORTHO05D009014 1.4e-19 101.3 205 31.7
SGA_v2.0_scaffold289G47248 Striga asiatica HOM05D006612 ORTHO05D009014 3.1e-19 100.1 152 30.9
ECA058G0002 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.9e-19 99.0 134 37.3
ECA246G2421 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.9e-19 99.0 134 37.3
SGA_v2.0_scaffold19G08816 Striga asiatica HOM05D006612 ORTHO05D009014 6.9e-19 99.0 214 29.0
Cc04_g13910 Coffea canephora HOM05D006612 ORTHO05D009014 1.2e-18 98.2 256 25.0
Cc09_g02230 Coffea canephora HOM05D006612 ORTHO05D009014 1.5e-18 97.8 206 25.7
SGA_v2.0_scaffold3G01561 Striga asiatica HOM05D006612 ORTHO05D009014 1.3e-17 94.7 194 27.3
SGA_v2.0_scaffold141G35579 Striga asiatica HOM05D006612 ORTHO05D009014 2.2e-17 94.0 191 31.9
SGA_v2.0_scaffold28G11832 Striga asiatica HOM05D006612 ORTHO05D009014 8.4e-17 92.0 77 61.0
SGA_v2.0_scaffold478G52233 Striga asiatica HOM05D006612 ORTHO05D009014 2.1e-15 87.4 224 23.7
SGA_v2.0_scaffold134G34706 Striga asiatica HOM05D006612 ORTHO05D009014 6.0e-15 85.9 54 79.6
SGA_v2.0_scaffold44G16948 Striga asiatica HOM05D006612 ORTHO05D009014 3.0e-14 83.6 70 71.4
SGA_v2.0_scaffold191G40424 Striga asiatica HOM05D029151 ORTHO05D399614 5.1e-14 82.8 69 69.6
SGA_v2.0_scaffold3598G54367 Striga asiatica HOM05D006612 ORTHO05D009014 5.1e-14 82.8 101 32.7
ECA233G4800 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.1e-13 81.6 320 26.6
SGA_v2.0_scaffold89G27407 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-13 81.6 126 39.7
SGA_v2.0_scaffold2G01273 Striga asiatica HOM05D006612 ORTHO05D009014 7.4e-13 79.0 67 64.2
SGA_v2.0_scaffold193G40692 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-12 77.8 81 53.1
ECA248G1451 Erigeron canadensis HOM05D000096 ORTHO05D000045 8.1e-12 75.5 197 26.9
SGA_v2.0_scaffold779G53587 Striga asiatica HOM05D068270 ORTHO05D009014 1.8e-11 74.3 81 42.0
SGA_v2.0_scaffold24G10704 Striga asiatica HOM05D021043 ORTHO05D009014 9.0e-11 72.0 219 24.2
SGA_v2.0_scaffold32G13336 Striga asiatica HOM05D021043 ORTHO05D009014 9.0e-11 72.0 219 24.2
SGA_v2.0_scaffold53G19313 Striga asiatica HOM05D021043 ORTHO05D009014 9.0e-11 72.0 219 24.2
Lsat_1_v5_gn_7_34501 Lactuca sativa HOM05D006612 ORTHO05D009014 1.5e-10 71.2 120 26.7
SGA_v2.0_scaffold14G06973 Striga asiatica HOM05D006612 ORTHO05D009014 1.3e-09 68.2 75 36.0
SGA_v2.0_scaffold54G19565 Striga asiatica HOM05D006612 ORTHO05D009014 1.3e-09 68.2 191 31.4
SGA_v2.0_scaffold132G34534 Striga asiatica HOM05D006612 ORTHO05D009014 4.9e-09 66.2 90 34.4
Cc02_g03800 Coffea canephora HOM05D006612 ORTHO05D009014 1.4e-08 64.7 134 26.1
SGA_v2.0_scaffold144G35921 Striga asiatica HOM05D006612 ORTHO05D009014 3.2e-08 63.5 43 67.4
SGA_v2.0_scaffold188G40332 Striga asiatica HOM05D006612 ORTHO05D009014 2.7e-07 60.5 135 25.9
SGA_v2.0_scaffold319G48529 Striga asiatica HOM05D006612 ORTHO05D009014 4.6e-07 59.7 79 35.4
Nitab4.5_0004971g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 8.7e-06 55.5 94 23.4


User provided reference genes

Program Settings