Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold43G16199 Striga asiatica HOM05D000040 ORTHO05D403072 1.6e-52 209.1 106 100.0
SGA_v2.0_scaffold42G15886 Striga asiatica HOM05D000040 ORTHO05D003752 1.8e-19 99.4 72 68.1
SGA_v2.0_scaffold42G15880 Striga asiatica HOM05D000040 ORTHO05D003752 1.1e-16 90.1 72 61.1
PGR004G1537 Punica granatum HOM05D000040 ORTHO05D003752 1.5e-10 69.7 95 38.9
MSTRG.19316 Avicennia marina HOM05D000040 ORTHO05D003752 4.4e-10 68.2 93 43.0
DCAR_013434 Daucus carota HOM05D000040 ORTHO05D003752 1.7e-09 66.2 95 41.1
COL.COLO4_29608 Corchorus olitorius HOM05D000040 ORTHO05D003752 2.2e-09 65.9 93 39.8
BolC7t45218H Brassica oleracea HOM05D000040 ORTHO05D003752 3.8e-09 65.1 95 36.8
Thhalv10010339m.g Eutrema salsugineum HOM05D000040 ORTHO05D003752 3.8e-09 65.1 95 36.8
BcaC02g09249 Brassica carinata HOM05D000040 ORTHO05D003752 4.9e-09 64.7 95 36.8
C04p40500 Brassica napus HOM05D000040 ORTHO05D003752 4.9e-09 64.7 95 36.8
BolC4t25630H Brassica oleracea HOM05D000040 ORTHO05D003752 4.9e-09 64.7 95 36.8
A03p48920 Brassica napus HOM05D000040 ORTHO05D003752 6.4e-09 64.3 95 35.8
MELO3C009522.2 Cucumis melo HOM05D000040 ORTHO05D003752 6.4e-09 64.3 98 37.8
Eucgr.A02601 Eucalyptus grandis HOM05D000040 ORTHO05D003752 6.4e-09 64.3 83 42.2
Aa31LG10G7550 Aethionema arabicum HOM05D000040 ORTHO05D003752 8.4e-09 63.9 95 36.8
BcaC06g33396 Brassica carinata HOM05D000040 ORTHO05D003752 8.4e-09 63.9 95 35.8
A04p06880 Brassica napus HOM05D000040 ORTHO05D003752 8.4e-09 63.9 95 36.8
C07p47010 Brassica napus HOM05D000040 ORTHO05D003752 8.4e-09 63.9 95 35.8
BraA03t13993Z Brassica rapa HOM05D000040 ORTHO05D003752 8.4e-09 63.9 95 35.8
BraA04t16388Z Brassica rapa HOM05D000040 ORTHO05D003752 8.4e-09 63.9 95 36.8
CARHR162270 Cardamine hirsuta HOM05D000040 ORTHO05D003752 8.4e-09 63.9 95 35.8
Cc01_g08480 Coffea canephora HOM05D000040 ORTHO05D003752 1.1e-08 63.5 95 38.9
SalBow1G2226 Salvia bowleyana HOM05D000040 ORTHO05D003752 1.1e-08 63.5 83 44.6
Sp5g09800 Schrenkiella parvula HOM05D000040 ORTHO05D003752 1.1e-08 63.5 95 35.8
Carub.0005s1889 Capsella rubella HOM05D000040 ORTHO05D003752 1.4e-08 63.2 95 36.8
Duzib128G0561 Durio zibethinus HOM05D000040 ORTHO05D003752 1.4e-08 63.2 95 37.9
Lj1g0007775 Lotus japonicus HOM05D000040 ORTHO05D003752 1.4e-08 63.2 97 41.2
AT3G52500 Arabidopsis thaliana HOM05D000040 ORTHO05D003752 1.9e-08 62.8 95 34.7
BcaC06g32921 Brassica carinata HOM05D000040 ORTHO05D003752 1.9e-08 62.8 95 34.7
Gohir.D01G192100 Gossypium hirsutum HOM05D000040 ORTHO05D003752 1.9e-08 62.8 83 39.8
Migut.J00715 Erythranthe guttata HOM05D000040 ORTHO05D003752 2.4e-08 62.4 95 36.8
Glyma.19G198500 Glycine max HOM05D000040 ORTHO05D003752 2.4e-08 62.4 83 39.8
Gorai.006G150600 Gossypium raimondii HOM05D000040 ORTHO05D003752 2.4e-08 62.4 95 36.8
Thecc.05G101700 Theobroma cacao HOM05D000040 ORTHO05D003752 2.4e-08 62.4 95 37.9
CiPaw.10G015900 Carya illinoinensis HOM05D000040 ORTHO05D003752 3.2e-08 62.0 83 41.0
Gohir.A09G135400 Gossypium hirsutum HOM05D000040 ORTHO05D003752 3.2e-08 62.0 95 37.9
Sed0026025 Sechium edule HOM05D000040 ORTHO05D003752 3.2e-08 62.0 90 36.7
Duzib093G1388 Durio zibethinus HOM05D000040 ORTHO05D003752 4.1e-08 61.6 95 36.8
PGSC0003DMG400005901 Solanum tuberosum HOM05D000040 ORTHO05D003752 4.1e-08 61.6 107 34.6
ClCG10G018480 Citrullus lanatus HOM05D000040 ORTHO05D003752 5.4e-08 61.2 98 37.8
CsaV3_6G041050 Cucumis sativus L. HOM05D000040 ORTHO05D003752 7.1e-08 60.8 85 38.8
Gorai.002G236000 Gossypium raimondii HOM05D000040 ORTHO05D003752 7.1e-08 60.8 83 38.6
Peaxi162Scf00755g00021 Petunia axillaris HOM05D000040 ORTHO05D003752 7.1e-08 60.8 104 36.5
Sabra16G0074200 Salix brachista HOM05D000040 ORTHO05D003752 7.1e-08 60.8 93 38.7
Solyc06g074000.1 Solanum lycopersicum HOM05D000040 ORTHO05D003752 7.1e-08 60.8 107 34.6
TWI74G0713 Tripterygium wilfordii HOM05D000040 ORTHO05D003752 7.1e-08 60.8 93 36.6
TAR270G0002 Trochodendron aralioides HOM05D000040 ORTHO05D003752 7.1e-08 60.8 95 35.8
CAN.G745.42 Capsicum annuum HOM05D000040 ORTHO05D003752 9.2e-08 60.5 77 41.6
Dinv12330 Davidia involucrata HOM05D000040 ORTHO05D003752 9.2e-08 60.5 95 36.8
Gohir.D09G132001 Gossypium hirsutum HOM05D000040 ORTHO05D003752 9.2e-08 60.5 95 35.8
Sopen06g030410 Solanum pennellii HOM05D000040 ORTHO05D003752 9.2e-08 60.5 106 34.9
THA.LOC104804399 Tarenaya hassleriana HOM05D000040 ORTHO05D003752 9.2e-08 60.5 95 33.7
VMungo1383G0789 Vigna mungo HOM05D000040 ORTHO05D003752 9.2e-08 60.5 83 39.8
CAN.G1463.8 Capsicum annuum HOM05D000040 ORTHO05D003752 1.2e-07 60.1 95 34.7
Dinv10944 Davidia involucrata HOM05D000040 ORTHO05D003752 1.2e-07 60.1 91 36.3
Lalb_Chr20g0111431 Lupinus albus HOM05D000040 ORTHO05D003752 1.2e-07 60.1 82 39.0
Nn6g34741 Nelumbo nucifera HOM05D000040 ORTHO05D003752 1.2e-07 60.1 95 34.7
QL07p037272 Quercus lobata HOM05D000040 ORTHO05D003752 1.2e-07 60.1 83 39.8
Atru.chr8.1387 Acer truncatum HOM05D000040 ORTHO05D003752 1.6e-07 59.7 95 34.7
CSS0012132 Camellia sinensis var. sinensis HOM05D000040 ORTHO05D003752 1.6e-07 59.7 83 39.8
MELO3C024582.2 Cucumis melo HOM05D000040 ORTHO05D003752 1.6e-07 59.7 83 39.8
CsaV3_3G037790 Cucumis sativus L. HOM05D000040 ORTHO05D003752 1.6e-07 59.7 95 35.8
Dinv08133 Davidia involucrata HOM05D000040 ORTHO05D003752 1.6e-07 59.7 91 36.3
Peaxi162Scf00010g00342 Petunia axillaris HOM05D000040 ORTHO05D003752 1.6e-07 59.7 95 36.8
Potri.016G071900 Populus trichocarpa HOM05D000040 ORTHO05D003752 1.6e-07 59.7 93 38.7
ClCG01G014950 Citrullus lanatus HOM05D000040 ORTHO05D003752 2.1e-07 59.3 95 35.8
Nitab4.5_0000380g0230 Nicotiana tabacum HOM05D000040 ORTHO05D003752 2.1e-07 59.3 104 34.6
QL07p037332 Quercus lobata HOM05D000040 ORTHO05D003752 2.1e-07 59.3 85 41.2
Atru.chr5.175 Acer truncatum HOM05D000040 ORTHO05D003752 2.7e-07 58.9 95 33.7
AL5G33210 Arabidopsis lyrata HOM05D000040 ORTHO05D003752 2.7e-07 58.9 95 31.6
Phvul.001G194500 Phaseolus vulgaris HOM05D000040 ORTHO05D003752 2.7e-07 58.9 83 38.6
Psat3g030000 Pisum sativum HOM05D000040 ORTHO05D003752 2.7e-07 58.9 83 39.8
Prupe.7G097600 Prunus persica HOM05D000040 ORTHO05D003752 2.7e-07 58.9 83 41.0
Sed0016062 Sechium edule HOM05D000040 ORTHO05D003752 2.7e-07 58.9 98 34.7
BcaB02g08565 Brassica carinata HOM05D000040 ORTHO05D003752 3.5e-07 58.5 95 31.6
Cpa.g.sc104.55 Carica papaya HOM05D000040 ORTHO05D003752 3.5e-07 58.5 95 35.8
QL07p037308 Quercus lobata HOM05D000040 ORTHO05D003752 3.5e-07 58.5 85 40.0
GSVIVG01033935001 Vitis vinifera HOM05D000040 ORTHO05D003752 3.5e-07 58.5 95 34.7
Gohir.A05G078700 Gossypium hirsutum HOM05D000040 ORTHO05D003752 4.6e-07 58.2 83 41.0
Gohir.A01G202200 Gossypium hirsutum HOM05D000040 ORTHO05D003752 6.0e-07 57.8 83 36.1
Thecc.09G275500 Theobroma cacao HOM05D000040 ORTHO05D003752 6.0e-07 57.8 95 36.8
CiPaw.09G019600 Carya illinoinensis HOM05D000040 ORTHO05D003752 7.8e-07 57.4 83 37.3
Nn1g04698 Nelumbo nucifera HOM05D000040 ORTHO05D003752 7.8e-07 57.4 95 34.7
Nitab4.5_0002706g0030 Nicotiana tabacum HOM05D000040 ORTHO05D003752 7.8e-07 57.4 104 33.7
Potri.006G204700 Populus trichocarpa HOM05D000040 ORTHO05D003752 7.8e-07 57.4 90 37.8
QL01p011610 Quercus lobata HOM05D000040 ORTHO05D003752 7.8e-07 57.4 83 41.0
SGA_v2.0_scaffold31G12838 Striga asiatica HOM05D000040 ORTHO05D003752 7.8e-07 57.4 96 35.4
Duzib168G0465 Durio zibethinus HOM05D000040 ORTHO05D003752 1.0e-06 57.0 83 42.2
Hma1.2p1_0064F.1_g034746 Hydrangea macrophylla HOM05D000040 ORTHO05D003752 1.0e-06 57.0 95 34.7
MD14G1036600 Malus domestica HOM05D000040 ORTHO05D003752 1.0e-06 57.0 81 39.5
TPR.G23354 Trifolium pratense HOM05D000040 ORTHO05D003752 1.3e-06 56.6 83 38.6
Oeu045036.1 Olea europaea HOM05D000040 ORTHO05D003752 1.7e-06 56.2 82 40.2
QL01p011348 Quercus lobata HOM05D000040 ORTHO05D003752 1.7e-06 56.2 83 39.8
vmacro07466 Vaccinium macrocarpon HOM05D000040 ORTHO05D003752 1.7e-06 56.2 95 32.6
Ah.15g090480 Amaranthus hybridus HOM05D000040 ORTHO05D003752 2.3e-06 55.8 83 38.6
Migut.D02411 Erythranthe guttata HOM05D000040 ORTHO05D003752 2.3e-06 55.8 95 33.7
Glyma.03G200900 Glycine max HOM05D000040 ORTHO05D003752 2.3e-06 55.8 83 37.3
Gorai.009G083200 Gossypium raimondii HOM05D000040 ORTHO05D003752 2.3e-06 55.8 83 39.8
Lalb_Chr25g0288061 Lupinus albus HOM05D000040 ORTHO05D003752 2.3e-06 55.8 91 33.0
Nitab4.5_0000893g0060 Nicotiana tabacum HOM05D000040 ORTHO05D003752 2.3e-06 55.8 95 33.7
Oeu045035.1 Olea europaea HOM05D000040 ORTHO05D003752 2.3e-06 55.8 82 40.2
Prupe.8G051600 Prunus persica HOM05D000040 ORTHO05D003752 2.3e-06 55.8 83 38.6
Sabra06G0157800 Salix brachista HOM05D000040 ORTHO05D003752 2.3e-06 55.8 96 36.5
Sc02g0000010 Simmondsia chinensis HOM05D000040 ORTHO05D003752 2.3e-06 55.8 95 33.7
Sc02g0000540 Simmondsia chinensis HOM05D000040 ORTHO05D003752 2.3e-06 55.8 95 33.7
COL.COLO4_22658 Corchorus olitorius HOM05D000040 ORTHO05D003752 3.0e-06 55.5 83 41.0
Haze_19690 Corylus avellana HOM05D000040 ORTHO05D003752 3.9e-06 55.1 83 38.6
Gohir.D05G081500 Gossypium hirsutum HOM05D000040 ORTHO05D003752 3.9e-06 55.1 83 39.8
MBI17_g17146_MAGBIO Magnolia biondii HOM05D000040 ORTHO05D003752 3.9e-06 55.1 95 32.6
Cfa016674 Carpinus fangiana HOM05D000040 ORTHO05D003752 5.1e-06 54.7 83 37.3
AUR62006273 Chenopodium quinoa HOM05D000040 ORTHO05D003752 5.1e-06 54.7 82 37.8
COL.COLO4_29607 Corchorus olitorius HOM05D000040 ORTHO05D003752 5.1e-06 54.7 96 36.5
TAR633G1638 Trochodendron aralioides HOM05D000040 ORTHO05D003752 5.1e-06 54.7 95 33.7
VMungo0720G1185 Vigna mungo HOM05D000040 ORTHO05D003752 5.1e-06 54.7 89 33.7
Ah.08g210150 Amaranthus hybridus HOM05D000040 ORTHO05D003752 6.6e-06 54.3 83 36.1
MD12G1037600 Malus domestica HOM05D000040 ORTHO05D003752 6.6e-06 54.3 83 38.6
CANSAT64G1304 Cannabis sativa HOM05D000040 ORTHO05D003752 8.6e-06 53.9 88 34.1
Duzib170G0248 Durio zibethinus HOM05D000040 ORTHO05D003752 8.6e-06 53.9 83 38.6
Rhsim03G0066500 Rhododendron simsii HOM05D000040 ORTHO05D003752 8.6e-06 53.9 92 32.6


User provided reference genes

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