Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold436G51603 Striga asiatica HOM05D007495 ORTHO05D009552 1.1e-99 366.7 187 100.0
MSTRG.17767 Avicennia marina HOM05D007495 ORTHO05D009552 9.7e-77 290.4 177 80.2
Oeu018477.1 Olea europaea HOM05D007495 ORTHO05D009552 1.1e-69 266.9 175 78.9
Migut.N02567 Erythranthe guttata HOM05D007495 ORTHO05D009552 2.2e-68 262.7 157 82.2
Cc01_g10460 Coffea canephora HOM05D007495 ORTHO05D009552 5.9e-66 254.6 192 69.3
CSS0017583 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 1.4e-62 243.4 183 67.8
SalBow1G5708 Salvia bowleyana HOM05D007495 ORTHO05D009552 5.2e-62 241.5 176 67.0
SalBow3G3637 Salvia bowleyana HOM05D007495 ORTHO05D009552 1.5e-61 240.0 170 70.0
Hma1.2p1_0051F.1_g029310 Hydrangea macrophylla HOM05D007495 ORTHO05D009552 5.7e-61 238.0 161 75.8
Nitab4.5_0000329g0280 Nicotiana tabacum HOM05D007495 ORTHO05D009552 7.5e-61 237.7 186 69.4
Nitab4.5_0005092g0010 Nicotiana tabacum HOM05D007495 ORTHO05D009552 7.5e-61 237.7 183 69.4
Actinidia24137 Actinidia chinensis HOM05D007495 ORTHO05D009552 9.1e-59 230.7 168 71.4
Dinv34730 Davidia involucrata HOM05D007495 ORTHO05D009552 2.6e-58 229.2 171 69.6
Rhsim13G0099600 Rhododendron simsii HOM05D007495 ORTHO05D009552 6.5e-57 224.6 169 70.4
Prupe.6G109500 Prunus persica HOM05D007495 ORTHO05D009552 1.9e-56 223.0 155 69.7
Lj2C1012G12 Lonicera japonica HOM05D007495 ORTHO05D009552 1.2e-55 220.3 160 71.2
QL01p015526 Quercus lobata HOM05D007495 ORTHO05D009552 1.6e-55 219.9 159 67.3
Atru.chr3.3537 Acer truncatum HOM05D007495 ORTHO05D009552 4.7e-55 218.4 155 69.0
CsaV3_6G014270 Cucumis sativus L. HOM05D007495 ORTHO05D009552 6.1e-55 218.0 155 69.0
ClCG02G021490 Citrullus lanatus HOM05D007495 ORTHO05D009552 2.3e-54 216.1 156 68.6
Nn6g35262 Nelumbo nucifera HOM05D007495 ORTHO05D009552 2.3e-54 216.1 156 69.2
Solyc11g066240.3 Solanum lycopersicum HOM05D007495 ORTHO05D009552 1.5e-53 213.4 193 63.2
PGSC0003DMG400010906 Solanum tuberosum HOM05D007495 ORTHO05D009552 2.0e-53 213.0 191 63.4
Manes.04G014200 Manihot esculenta HOM05D007495 ORTHO05D009552 2.6e-53 212.6 165 65.5
Ciclev10029419m.g Citrus clementina HOM05D007495 ORTHO05D009552 5.7e-53 211.5 165 63.0
GSVIVG01031491001 Vitis vinifera HOM05D007495 ORTHO05D009552 7.5e-53 211.1 160 67.5
PGSC0003DMG400000407 Solanum tuberosum HOM05D007495 ORTHO05D009552 1.3e-52 210.3 190 62.6
vmacro03264 Vaccinium macrocarpon HOM05D007495 ORTHO05D009552 1.3e-52 210.3 200 59.0
Sopen11g025970 Solanum pennellii HOM05D007495 ORTHO05D009552 2.2e-52 209.5 192 63.0
MD11G1146400 Malus domestica HOM05D007495 ORTHO05D009552 2.8e-52 209.1 162 64.2
TAR633G0300 Trochodendron aralioides HOM05D007495 ORTHO05D009552 2.8e-52 209.1 159 67.9
CiPaw.13G124600 Carya illinoinensis HOM05D007495 ORTHO05D009552 3.7e-52 208.8 160 65.0
MELO3C026944.2 Cucumis melo HOM05D007495 ORTHO05D009552 6.3e-52 208.0 156 66.0
FAN25G1473 Fragaria x ananassa HOM05D007495 ORTHO05D009552 1.1e-51 207.2 160 61.9
Peaxi162Scf00892g00019 Petunia axillaris HOM05D007495 ORTHO05D009552 1.4e-51 206.8 155 72.3
RcHm_v2.0_Chr5g0057451 Rosa chinensis HOM05D007495 ORTHO05D009552 1.8e-51 206.5 160 63.1
Haze_23728 Corylus avellana HOM05D007495 ORTHO05D009552 5.4e-51 204.9 161 65.2
FAN21G3793 Fragaria x ananassa HOM05D007495 ORTHO05D009552 1.2e-50 203.8 164 59.1
Sopen01g017570 Solanum pennellii HOM05D007495 ORTHO05D009552 1.2e-50 203.8 198 58.6
Cfa010302 Carpinus fangiana HOM05D007495 ORTHO05D009552 1.0e-49 200.7 161 64.0
Eucgr.B03939 Eucalyptus grandis HOM05D007495 ORTHO05D009552 5.0e-49 198.4 154 62.3
Lsat_1_v5_gn_2_96660 Lactuca sativa HOM05D007495 ORTHO05D009552 5.5e-48 194.9 169 61.5
Sed0010722 Sechium edule HOM05D007495 ORTHO05D009552 2.1e-47 193.0 154 62.3
DCAR_018778 Daucus carota HOM05D007495 ORTHO05D009552 1.8e-46 189.9 171 59.1
Potri.004G215300 Populus trichocarpa HOM05D007495 ORTHO05D009552 3.0e-46 189.1 162 59.9
AUR62014942 Chenopodium quinoa HOM05D007495 ORTHO05D009552 4.0e-46 188.7 153 65.4
AUR62029199 Chenopodium quinoa HOM05D007495 ORTHO05D009552 4.0e-46 188.7 153 65.4
HanXRQChr09g0259381 Helianthus annuus HOM05D007495 ORTHO05D009552 1.5e-45 186.8 158 60.1
Sabra04G0146300 Salix brachista HOM05D007495 ORTHO05D009552 1.5e-45 186.8 163 60.1
Hund08367 Selenicereus undatus HOM05D007495 ORTHO05D009552 2.8e-44 182.6 162 59.3
Thecc.09G349500 Theobroma cacao HOM05D007495 ORTHO05D009552 1.1e-43 180.6 156 57.1
Ah.01g003160 Amaranthus hybridus HOM05D007495 ORTHO05D009552 1.2e-42 177.2 153 63.4
PSO210G3489 Papaver somniferum HOM05D007495 ORTHO05D009552 2.0e-42 176.4 157 58.6
Lalb_Chr24g0394861 Lupinus albus HOM05D007495 ORTHO05D009552 2.7e-42 176.0 183 51.9
VMungo1080G0225 Vigna mungo HOM05D007495 ORTHO05D009552 3.5e-42 175.6 153 58.8
Aqoxy1G01135 Aquilegia oxysepala HOM05D007495 ORTHO05D009552 1.0e-41 174.1 162 54.9
PSO210G2188 Papaver somniferum HOM05D007495 ORTHO05D009552 6.6e-41 171.4 163 55.8
EL10Ac9g22596 Beta vulgaris HOM05D007495 ORTHO05D009552 8.6e-41 171.0 187 51.3
Glyma.13G322700 Glycine max HOM05D007495 ORTHO05D009552 8.6e-41 171.0 165 52.7
PGR102G0900 Punica granatum HOM05D007495 ORTHO05D009552 8.6e-41 171.0 163 52.8
Phvul.005G131100 Phaseolus vulgaris HOM05D007495 ORTHO05D009552 1.5e-40 170.2 153 59.5
arahy.Tifrunner.gnm1.ann1.F5YJ3L Arachis hypogaea HOM05D007495 ORTHO05D009552 4.7e-39 165.2 157 56.7
FvH4_3g30910 Fragaria vesca HOM05D007495 ORTHO05D009552 6.1e-39 164.9 130 59.2
arahy.Tifrunner.gnm1.ann1.KUS9HA Arachis hypogaea HOM05D007495 ORTHO05D009552 8.0e-39 164.5 150 58.0
CSS0034387 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 1.0e-38 164.1 116 69.0
MBI11_g41957_MAGBIO Magnolia biondii HOM05D007495 ORTHO05D009552 2.6e-37 159.5 170 52.4
Carub.0004s0888 Capsella rubella HOM05D007495 ORTHO05D009552 8.3e-36 154.5 149 55.7
AT2G28105 Arabidopsis thaliana HOM05D007495 ORTHO05D009552 1.4e-35 153.7 149 55.0
THA.LOC104800583 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 1.8e-35 153.3 173 48.6
Thhalv10017338m.g Eutrema salsugineum HOM05D007495 ORTHO05D009552 3.2e-35 152.5 149 56.4
C03p31690 Brassica napus HOM05D007495 ORTHO05D009552 7.0e-35 151.4 159 52.8
AL4G22050 Arabidopsis lyrata HOM05D007495 ORTHO05D009552 9.2e-35 151.0 149 53.7
THA.LOC104808393 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 9.2e-35 151.0 161 50.9
ATR1132G058 Amborella trichopoda HOM05D007495 ORTHO05D009552 1.2e-34 150.6 159 49.1
A03p26400 Brassica napus HOM05D007495 ORTHO05D009552 1.2e-34 150.6 163 50.9
BraA03t11855Z Brassica rapa HOM05D007495 ORTHO05D009552 1.2e-34 150.6 163 50.9
BcaC01g04959 Brassica carinata HOM05D007495 ORTHO05D009552 2.7e-34 149.4 159 52.2
BolC3t15512H Brassica oleracea HOM05D007495 ORTHO05D009552 2.7e-34 149.4 159 52.2
BcaB01g03091 Brassica carinata HOM05D007495 ORTHO05D009552 3.5e-34 149.1 161 50.3
CARHR120870 Cardamine hirsuta HOM05D007495 ORTHO05D009552 3.5e-34 149.1 150 54.0
Duzib168G1093 Durio zibethinus HOM05D007495 ORTHO05D009552 3.5e-34 149.1 158 49.4
Duzib147G1262 Durio zibethinus HOM05D007495 ORTHO05D009552 1.0e-33 147.5 164 47.6
Sp4g10910 Schrenkiella parvula HOM05D007495 ORTHO05D009552 1.0e-33 147.5 167 49.7
CAN.G546.21 Capsicum annuum HOM05D007495 ORTHO05D009552 1.7e-33 146.7 102 72.5
unitig_27.g25050 Utricularia gibba HOM05D007495 ORTHO05D009552 1.7e-33 146.7 170 47.6
HPP92_026750 Vanilla planifolia HOM05D007495 ORTHO05D009552 3.3e-32 142.5 147 50.3
Gohir.A11G006200 Gossypium hirsutum HOM05D007495 ORTHO05D009552 1.2e-29 134.0 153 44.4
Pp3c2_14140 Physcomitrium patens HOM05D007495 ORTHO05D009552 4.4e-29 132.1 154 48.7
CDE08G1192 Ceratophyllum demersum HOM05D007495 ORTHO05D009552 7.5e-29 131.3 137 48.2
Gorai.007G006500 Gossypium raimondii HOM05D007495 ORTHO05D009552 1.3e-28 130.6 151 43.7
Gohir.D11G005300 Gossypium hirsutum HOM05D007495 ORTHO05D009552 3.7e-28 129.0 151 43.7
Aa31LG5G8040 Aethionema arabicum HOM05D002446 ORTHO05D002941 1.4e-27 127.1 143 50.3
Solyc01g034070.2 Solanum lycopersicum HOM05D007495 ORTHO05D009552 9.2e-27 124.4 135 56.3
Thecc.09G349300 Theobroma cacao HOM05D007495 ORTHO05D009552 1.2e-23 114.0 106 52.8
QL01p015485 Quercus lobata HOM05D007495 ORTHO05D000007 1.3e-20 104.0 82 62.2
COL.COLO4_31833 Corchorus olitorius HOM05D000070 ORTHO05D005950 7.1e-19 98.2 121 47.1
AagrBONN_evm.TU.Sc2ySwM_228.3308 Anthoceros agrestis HOM05D007495 ORTHO05D009552 7.8e-18 94.7 130 37.7
SEGI_19183 Sequoiadendron giganteum HOM05D007495 ORTHO05D009552 1.3e-17 94.0 99 45.5
arahy.Tifrunner.gnm1.ann1.48A6J1 Arachis hypogaea HOM05D007495 ORTHO05D009552 9.5e-16 87.8 85 55.3
TAR636G3027 Trochodendron aralioides HOM05D007495 ORTHO05D009552 1.8e-14 83.6 71 59.2
Actinidia07176 Actinidia chinensis HOM05D007495 ORTHO05D009552 1.0e-09 67.8 48 70.8
arahy.Tifrunner.gnm1.ann1.SCS43X Arachis hypogaea HOM05D007495 ORTHO05D009552 4.3e-08 62.4 60 48.3
arahy.Tifrunner.gnm1.ann1.U22N6I Arachis hypogaea HOM05D001167 ORTHO05D014890 2.4e-06 56.6 35 74.3


User provided reference genes

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