Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold42G16144 Striga asiatica HOM05D006020 ORTHO05D007665 2.0e-192 675.6 347 100.0
MSTRG.17550 Avicennia marina HOM05D006020 ORTHO05D007665 2.7e-109 399.4 390 57.4
Migut.N02265 Erythranthe guttata HOM05D006020 ORTHO05D007665 2.3e-108 396.4 390 59.2
SalBow2G1017 Salvia bowleyana HOM05D006020 ORTHO05D007665 1.5e-86 323.9 393 50.1
Oeu042519.1 Olea europaea HOM05D006020 ORTHO05D007665 5.8e-83 312.0 320 54.1
Dinv04657 Davidia involucrata HOM05D006020 ORTHO05D007665 4.3e-78 295.8 317 53.3
Dinv19209 Davidia involucrata HOM05D006020 ORTHO05D007665 5.2e-76 288.9 320 51.9
Nitab4.5_0001872g0010 Nicotiana tabacum HOM05D006020 ORTHO05D007665 3.2e-73 279.6 329 49.5
Lj1C84T12 Lonicera japonica HOM05D006020 ORTHO05D007665 7.1e-73 278.5 317 49.2
Nitab4.5_0000045g0010 Nicotiana tabacum HOM05D006020 ORTHO05D007665 7.1e-73 278.5 329 48.9
Solyc09g061420.3 Solanum lycopersicum HOM05D006020 ORTHO05D007665 1.0e-71 274.6 322 51.2
Thecc.01G227300 Theobroma cacao HOM05D006020 ORTHO05D007665 3.9e-71 272.7 318 49.7
Nitab4.5_0002085g0020 Nicotiana tabacum HOM05D006020 ORTHO05D007665 4.3e-70 269.2 320 48.4
Sopen09g024240 Solanum pennellii HOM05D006020 ORTHO05D007665 7.3e-70 268.5 321 50.2
GSVIVG01028621001 Vitis vinifera HOM05D006020 ORTHO05D007665 7.3e-70 268.5 307 51.5
Duzib133G0822 Durio zibethinus HOM05D006020 ORTHO05D007665 9.6e-70 268.1 310 50.0
Cc01_g17190 Coffea canephora HOM05D006020 ORTHO05D007665 1.2e-69 267.7 335 47.2
Potri.002G241200 Populus trichocarpa HOM05D006020 ORTHO05D007665 1.6e-69 267.3 317 48.3
Nitab4.5_0004922g0030 Nicotiana tabacum HOM05D006020 ORTHO05D007665 1.4e-68 264.2 320 47.8
vmacro02750 Vaccinium macrocarpon HOM05D006020 ORTHO05D007665 1.2e-67 261.2 321 48.0
Sabra02G0183800 Salix brachista HOM05D006020 ORTHO05D007665 1.5e-67 260.8 324 47.2
Rhsim13G0044300 Rhododendron simsii HOM05D006020 ORTHO05D006855 4.4e-67 259.2 332 46.1
Actinidia37585 Actinidia chinensis HOM05D006020 ORTHO05D007665 1.3e-66 257.7 318 46.9
TAR365G0939 Trochodendron aralioides HOM05D006020 ORTHO05D007665 1.7e-66 257.3 317 46.4
Ciclev10019729m.g Citrus clementina HOM05D006020 ORTHO05D007665 1.1e-65 254.6 319 46.7
CiPaw.04G106000 Carya illinoinensis HOM05D006020 ORTHO05D007665 2.4e-65 253.4 312 46.2
Sc05g0002440 Simmondsia chinensis HOM05D006020 ORTHO05D007665 4.2e-65 252.7 317 44.8
Manes.12G041000 Manihot esculenta HOM05D006020 ORTHO05D007665 5.4e-65 252.3 318 48.7
Prupe.8G204200 Prunus persica HOM05D006020 ORTHO05D007665 1.2e-64 251.1 316 45.3
Atru.chr5.2019 Acer truncatum HOM05D006020 ORTHO05D007665 1.0e-63 248.1 319 46.7
Gorai.007G153400 Gossypium raimondii HOM05D006020 ORTHO05D007665 1.7e-63 247.3 317 44.8
MBI10_g05712_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 1.7e-63 247.3 320 44.7
Gohir.A11G136800 Gossypium hirsutum HOM05D006020 ORTHO05D007665 6.6e-63 245.4 320 45.3
PGR044G0586 Punica granatum HOM05D006020 ORTHO05D007665 6.6e-63 245.4 315 45.7
CAN.G771.64 Capsicum annuum HOM05D006020 ORTHO05D007665 8.7e-63 245.0 316 45.9
Gohir.D11G143100 Gossypium hirsutum HOM05D006020 ORTHO05D007665 8.7e-63 245.0 326 44.2
MD05G1177200 Malus domestica HOM05D006020 ORTHO05D007665 1.9e-62 243.8 316 44.9
QL04p091507 Quercus lobata HOM05D006020 ORTHO05D007665 7.3e-62 241.9 379 41.7
FvH4_2g19230 Fragaria vesca HOM05D006020 ORTHO05D007665 1.6e-61 240.7 315 45.1
ATR0736G004 Amborella trichopoda HOM05D006020 ORTHO05D007665 3.6e-61 239.6 334 42.5
ECA236G4144 Erigeron canadensis HOM05D006020 ORTHO05D007665 3.6e-61 239.6 320 46.2
FAN24G1617 Fragaria x ananassa HOM05D006020 ORTHO05D007665 3.6e-61 239.6 315 45.1
Sed0023867 Sechium edule HOM05D006020 ORTHO05D007665 1.8e-60 237.3 332 42.5
CsaV3_7G025840 Cucumis sativus L. HOM05D006020 ORTHO05D007665 3.1e-60 236.5 311 43.1
Peaxi162Scf00107g00133 Petunia axillaris HOM05D006020 ORTHO05D007665 3.1e-60 236.5 319 45.8
FAN15G0009 Fragaria x ananassa HOM05D006020 ORTHO05D007665 5.3e-60 235.7 315 44.4
FAN27G2268 Fragaria x ananassa HOM05D006020 ORTHO05D007665 6.9e-60 235.3 315 44.8
RcHm_v2.0_Chr6g0285011 Rosa chinensis HOM05D006020 ORTHO05D007665 6.9e-60 235.3 315 43.2
TWI75G0236 Tripterygium wilfordii HOM05D006020 ORTHO05D007665 3.4e-59 233.0 332 42.5
CANSAT01G2399 Cannabis sativa HOM05D006020 ORTHO05D007665 7.6e-59 231.9 311 43.7
Aqoxy5G00068 Aquilegia oxysepala HOM05D006020 ORTHO05D007665 1.3e-58 231.1 318 43.1
Eucgr.K03608 Eucalyptus grandis HOM05D006020 ORTHO05D007665 1.3e-58 231.1 316 44.6
COL.COLO4_09005 Corchorus olitorius HOM05D006020 ORTHO05D007665 8.4e-58 228.4 341 43.7
Nn1g07811 Nelumbo nucifera HOM05D006020 ORTHO05D007665 8.4e-58 228.4 313 43.8
Manes.13G045000 Manihot esculenta HOM05D006020 ORTHO05D007665 2.4e-57 226.9 318 45.0
MELO3C012759.2 Cucumis melo HOM05D006020 ORTHO05D007665 1.2e-56 224.6 312 41.7
HanXRQChr10g0287321 Helianthus annuus HOM05D006020 ORTHO05D007665 2.7e-56 223.4 317 43.8
Lsat_1_v5_gn_8_90041 Lactuca sativa HOM05D006066 ORTHO05D007720 1.3e-55 221.1 320 42.8
Glyma.08G355500 Glycine max HOM05D006020 ORTHO05D007665 1.5e-54 217.6 327 40.4
BraA06t26802Z Brassica rapa HOM05D006020 ORTHO05D007665 2.5e-54 216.9 315 42.2
Lj1g0020866 Lotus japonicus HOM05D006020 ORTHO05D007665 9.6e-54 214.9 339 39.2
Phvul.008G124000 Phaseolus vulgaris HOM05D006020 ORTHO05D007665 1.3e-53 214.5 328 39.0
Glyma.18G171900 Glycine max HOM05D006020 ORTHO05D007665 8.1e-53 211.8 328 39.6
BcaC06g30754 Brassica carinata HOM05D006020 ORTHO05D007665 1.1e-52 211.5 315 41.3
TPR.G15290 Trifolium pratense HOM05D006020 ORTHO05D007665 1.1e-52 211.5 341 39.6
A06p38870 Brassica napus HOM05D006020 ORTHO05D007665 1.4e-52 211.1 315 41.6
Lalb_Chr19g0125561 Lupinus albus HOM05D006020 ORTHO05D007665 2.4e-52 210.3 316 39.6
C07p39450 Brassica napus HOM05D006020 ORTHO05D007665 4.0e-52 209.5 315 41.3
VMungo1383G1607 Vigna mungo HOM05D006020 ORTHO05D007665 4.0e-52 209.5 328 38.1
BolC7t44464H Brassica oleracea HOM05D006020 ORTHO05D007665 5.3e-52 209.1 315 41.3
Thhalv10004024m.g Eutrema salsugineum HOM05D006020 ORTHO05D007665 6.9e-52 208.8 319 41.4
PSO170G4604 Papaver somniferum HOM05D006020 ORTHO05D007665 6.9e-52 208.8 344 40.4
Hund05517 Selenicereus undatus HOM05D006020 ORTHO05D007665 6.9e-52 208.8 316 40.8
Sp2g19230 Schrenkiella parvula HOM05D006020 ORTHO05D007665 1.2e-51 208.0 315 42.5
EL10Ac7g17782 Beta vulgaris HOM05D006020 ORTHO05D007665 2.6e-51 206.8 322 38.8
Medtr7g058760 Medicago truncatula HOM05D006020 ORTHO05D007665 2.6e-51 206.8 316 38.6
Haze_24783 Corylus avellana HOM05D006020 ORTHO05D007665 1.3e-50 204.5 350 40.0
AT5G48830 Arabidopsis thaliana HOM05D006020 ORTHO05D007665 1.7e-50 204.1 316 42.1
THA.LOC104818953 Tarenaya hassleriana HOM05D006020 ORTHO05D007665 1.7e-50 204.1 311 42.8
BcaB07g30043 Brassica carinata HOM05D006020 ORTHO05D007665 2.9e-50 203.4 323 40.6
ClCG09G009100 Citrullus lanatus HOM05D006020 ORTHO05D007665 8.4e-50 201.8 311 39.5
PSO674G0123 Papaver somniferum HOM05D006020 ORTHO05D007665 1.1e-49 201.4 295 43.1
arahy.Tifrunner.gnm1.ann1.PQ4NGV Arachis hypogaea HOM05D006020 ORTHO05D007665 4.2e-49 199.5 316 37.3
AL8G22000 Arabidopsis lyrata HOM05D006020 ORTHO05D007665 9.3e-49 198.4 316 40.5
Aa31sc866G30 Aethionema arabicum HOM05D006020 ORTHO05D007665 2.7e-48 196.8 316 39.9
A02p37730 Brassica napus HOM05D006020 ORTHO05D007665 2.7e-48 196.8 319 40.8
BraA02t08755Z Brassica rapa HOM05D006020 ORTHO05D007665 2.7e-48 196.8 319 40.4
BolC2t11751H Brassica oleracea HOM05D006020 ORTHO05D007665 4.6e-48 196.1 317 41.0
Carub.0008s0856 Capsella rubella HOM05D006020 ORTHO05D007665 1.0e-47 194.9 316 40.5
CARHR182910 Cardamine hirsuta HOM05D006020 ORTHO05D007665 1.0e-47 194.9 316 40.2
AUR62031841 Chenopodium quinoa HOM05D006020 ORTHO05D007665 1.9e-46 190.7 329 36.5
BcaC03g17676 Brassica carinata HOM05D006020 ORTHO05D007665 4.3e-46 189.5 316 39.6
C02p56820 Brassica napus HOM05D006020 ORTHO05D007665 4.3e-46 189.5 316 39.6
DCAR_018556 Daucus carota HOM05D006066 ORTHO05D007720 4.3e-46 189.5 307 38.4
TAR362G0890 Trochodendron aralioides HOM05D006020 ORTHO05D007665 1.1e-44 184.9 225 48.4
CDE06G1596 Ceratophyllum demersum HOM05D006020 ORTHO05D007665 1.4e-41 174.5 244 43.4
AUR62008869 Chenopodium quinoa HOM05D006020 ORTHO05D007665 4.6e-40 169.5 374 32.9
HPP92_017884 Vanilla planifolia HOM05D006020 ORTHO05D007665 8.7e-39 165.2 321 35.8
Ah.08g213940 Amaranthus hybridus HOM05D006020 ORTHO05D007665 1.1e-38 164.9 249 38.6
MBI09_g17752_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 4.2e-33 146.4 158 50.6
MBI19_g27116_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 3.5e-32 143.3 158 50.6
HPP92_017879 Vanilla planifolia HOM05D006020 ORTHO05D007665 3.0e-31 140.2 238 39.5
SEGI_37377 Sequoiadendron giganteum HOM05D006020 ORTHO05D007665 4.8e-29 132.9 318 31.1
Zm00001eb241910 Zea mays HOM05D006020 ORTHO05D007665 1.4e-28 131.3 324 31.8
arahy.Tifrunner.gnm1.ann1.PG1H4F Arachis hypogaea HOM05D006020 ORTHO05D007665 3.1e-28 130.2 248 33.1
FAN15G1634 Fragaria x ananassa HOM05D006020 ORTHO05D007665 1.3e-26 124.8 190 37.9
Psat3g144040 Pisum sativum HOM05D006020 ORTHO05D007665 1.5e-22 111.3 191 34.0
MBI12_g18650_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 3.7e-21 106.7 136 44.9
Pp3c24_4300 Physcomitrium patens HOM05D006020 ORTHO05D007665 4.2e-17 93.2 373 26.8
Actinidia30087 Actinidia chinensis HOM05D006020 ORTHO05D007665 2.7e-16 90.5 64 75.0
Mapoly0173s0025 Marchantia polymorpha HOM05D006020 ORTHO05D007665 3.6e-16 90.1 330 25.2
AagrBONN_evm.TU.Sc2ySwM_344.2296 Anthoceros agrestis HOM05D006020 ORTHO05D007665 2.0e-14 84.3 340 26.5
SMO115G0313 Selaginella moellendorffii HOM05D006020 ORTHO05D007665 2.6e-14 84.0 324 26.9
SEGI_14686 Sequoiadendron giganteum HOM05D006020 ORTHO05D007665 9.7e-14 82.0 97 50.5
MBI01_g07173_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 2.2e-10 70.9 140 35.0
arahy.Tifrunner.gnm1.ann1.3CP2KK Arachis hypogaea HOM05D001055 ORTHO05D000867 6.7e-07 59.3 44 65.9
MBI16_g14988_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 6.7e-07 59.3 90 36.7
MBI12_g40856_MAGBIO Magnolia biondii HOM05D006020 ORTHO05D007665 1.5e-06 58.2 90 37.8
unitig_85.g27279 Utricularia gibba HOM05D006020 ORTHO05D007665 4.4e-06 56.6 66 50.0
TAR362G0264 Trochodendron aralioides HOM05D006020 ORTHO05D007665 5.7e-06 56.2 54 46.3


User provided reference genes

Program Settings