Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold42G16089 Striga asiatica HOM05D005683 ORTHO05D006958 7.3e-106 387.1 179 100.0
SGA_v2.0_scaffold114G31992 Striga asiatica HOM05D005683 ORTHO05D006958 5.1e-43 178.3 190 53.7
MSTRG.7277 Avicennia marina HOM05D005683 ORTHO05D006958 3.7e-33 145.6 149 49.0
Oeu021580.1 Olea europaea HOM05D005683 ORTHO05D006958 4.7e-28 128.6 150 45.3
GSVIVG01003677001 Vitis vinifera HOM05D005683 ORTHO05D006958 6.1e-28 128.3 151 46.4
Cc02_g12200 Coffea canephora HOM05D005683 ORTHO05D006958 1.0e-27 127.5 149 48.3
Eucgr.E03677 Eucalyptus grandis HOM05D005683 ORTHO05D006958 3.9e-27 125.6 148 44.6
PGSC0003DMG400022348 Solanum tuberosum HOM05D005683 ORTHO05D006958 2.0e-26 123.2 146 49.3
arahy.Tifrunner.gnm1.ann1.1EQ2T2 Arachis hypogaea HOM05D005683 ORTHO05D006958 3.3e-26 122.5 149 46.3
Migut.H01529 Erythranthe guttata HOM05D005683 ORTHO05D006958 3.3e-26 122.5 151 44.4
Peaxi162Scf01035g00114 Petunia axillaris HOM05D005683 ORTHO05D006958 3.3e-26 122.5 149 47.0
Sopen02g024190 Solanum pennellii HOM05D005683 ORTHO05D006958 4.4e-26 122.1 146 48.6
Migut.M01228 Erythranthe guttata HOM05D005683 ORTHO05D006958 7.4e-26 121.3 152 43.4
Ca_00226_v3 Cicer arietinum L. HOM05D005683 ORTHO05D006958 9.7e-26 120.9 152 44.7
Lj6g0011505 Lotus japonicus HOM05D005683 ORTHO05D006958 9.7e-26 120.9 149 46.3
Solyc02g079390.4 Solanum lycopersicum HOM05D005683 ORTHO05D006958 9.7e-26 120.9 146 47.9
VMungo0540G1177 Vigna mungo HOM05D005683 ORTHO05D006958 1.3e-25 120.6 149 47.0
arahy.Tifrunner.gnm1.ann1.YX67LP Arachis hypogaea HOM05D005683 ORTHO05D006958 1.7e-25 120.2 149 45.6
Medtr2g011490 Medicago truncatula HOM05D005683 ORTHO05D006958 1.7e-25 120.2 149 44.3
PGR042G1297 Punica granatum HOM05D005683 ORTHO05D006958 3.7e-25 119.0 149 47.0
ClCG01G022390 Citrullus lanatus HOM05D005683 ORTHO05D006958 1.1e-24 117.5 147 46.3
PSO541G3127 Papaver somniferum HOM05D005683 ORTHO05D006958 1.1e-24 117.5 145 45.5
TPR.G36735 Trifolium pratense HOM05D005683 ORTHO05D006958 1.1e-24 117.5 149 43.6
Atru.chr10.2035 Acer truncatum HOM05D005683 ORTHO05D006958 1.4e-24 117.1 152 46.1
Actinidia24049 Actinidia chinensis HOM05D005683 ORTHO05D006958 1.8e-24 116.7 153 43.8
Glyma.15G066100 Glycine max HOM05D005683 ORTHO05D006958 3.1e-24 115.9 149 43.0
Lalb_Chr18g0060021 Lupinus albus HOM05D005683 ORTHO05D006958 3.1e-24 115.9 149 42.3
Sed0027497 Sechium edule HOM05D005683 ORTHO05D006958 3.1e-24 115.9 150 44.0
Nitab4.5_0000649g0210 Nicotiana tabacum HOM05D005683 ORTHO05D006958 4.1e-24 115.5 147 44.9
PSO675G7592 Papaver somniferum HOM05D005683 ORTHO05D006958 5.3e-24 115.2 145 44.8
TPR.G15376 Trifolium pratense HOM05D005683 ORTHO05D006958 5.3e-24 115.2 149 45.0
EL10Ac8g19981 Beta vulgaris HOM05D005683 ORTHO05D006958 7.0e-24 114.8 124 46.0
Haze_06612 Corylus avellana HOM05D005683 ORTHO05D006958 7.0e-24 114.8 150 43.3
Phvul.006G193600 Phaseolus vulgaris HOM05D005683 ORTHO05D006958 9.1e-24 114.4 147 44.2
A06p08000 Brassica napus HOM05D005683 ORTHO05D006958 1.2e-23 114.0 147 42.2
BolC5t29702H Brassica oleracea HOM05D005683 ORTHO05D006958 1.2e-23 114.0 147 42.9
BraA06t23999Z Brassica rapa HOM05D005683 ORTHO05D006958 1.2e-23 114.0 147 42.2
MELO3C007336.2 Cucumis melo HOM05D005683 ORTHO05D006958 1.2e-23 114.0 147 44.9
Glyma.13G247700 Glycine max HOM05D005683 ORTHO05D006958 1.2e-23 114.0 186 38.7
QL05p080525 Quercus lobata HOM05D005683 ORTHO05D006958 1.2e-23 114.0 149 42.3
C05p09600 Brassica napus HOM05D005683 ORTHO05D006958 2.6e-23 112.8 147 42.9
Duzib192G0920 Durio zibethinus HOM05D005683 ORTHO05D006958 2.6e-23 112.8 120 50.8
Lalb_Chr05g0218101 Lupinus albus HOM05D005683 ORTHO05D006958 2.6e-23 112.8 148 43.2
Zm00001eb323790 Zea mays HOM05D005683 ORTHO05D006958 2.6e-23 112.8 132 44.7
Sed0004151 Sechium edule HOM05D005683 ORTHO05D006958 3.5e-23 112.5 147 43.5
AL1G22470 Arabidopsis lyrata HOM05D005683 ORTHO05D006958 5.9e-23 111.7 147 42.9
Ca_18471_v3 Cicer arietinum L. HOM05D005683 ORTHO05D006958 5.9e-23 111.7 149 44.3
CsaV3_6G049570 Cucumis sativus L. HOM05D005683 ORTHO05D006958 5.9e-23 111.7 147 43.5
Dinv40458 Davidia involucrata HOM05D005683 ORTHO05D006958 7.7e-23 111.3 191 38.2
Aa31LG1G3330 Aethionema arabicum HOM05D005683 ORTHO05D006958 1.0e-22 110.9 147 43.5
Phvul.002G220600 Phaseolus vulgaris HOM05D005683 ORTHO05D006958 1.0e-22 110.9 147 41.5
BcaC05g25012 Brassica carinata HOM05D005683 ORTHO05D006958 1.7e-22 110.2 147 41.5
AUR62012512 Chenopodium quinoa HOM05D005683 ORTHO05D006958 1.7e-22 110.2 150 43.3
AUR62014686 Chenopodium quinoa HOM05D005683 ORTHO05D006958 1.7e-22 110.2 124 46.8
Glyma.07G188900 Glycine max HOM05D005683 ORTHO05D006958 1.7e-22 110.2 152 39.5
MD10G1305800 Malus domestica HOM05D005683 ORTHO05D006958 2.2e-22 109.8 125 46.4
Sc17g0006760 Simmondsia chinensis HOM05D005683 ORTHO05D006958 2.2e-22 109.8 149 39.6
TAR629G3446 Trochodendron aralioides HOM05D005683 ORTHO05D006958 2.2e-22 109.8 148 42.6
Lj4g0024466 Lotus japonicus HOM05D005683 ORTHO05D006958 2.9e-22 109.4 149 40.3
Manes.17G032900 Manihot esculenta HOM05D005683 ORTHO05D006958 2.9e-22 109.4 151 44.4
VMungo0251G1023 Vigna mungo HOM05D005683 ORTHO05D006958 2.9e-22 109.4 147 42.2
Actinidia11820 Actinidia chinensis HOM05D003506 ORTHO05D006958 3.8e-22 109.0 123 47.2
Carub.0001s1101 Capsella rubella HOM05D005683 ORTHO05D006958 3.8e-22 109.0 147 42.9
Cpa.g.sc27.157 Carica papaya HOM05D005683 ORTHO05D006958 3.8e-22 109.0 154 42.2
FvH4_3g03670 Fragaria vesca HOM05D005683 ORTHO05D006958 3.8e-22 109.0 123 43.9
FAN11G3671 Fragaria x ananassa HOM05D005683 ORTHO05D006958 3.8e-22 109.0 123 43.9
FAN16G0586 Fragaria x ananassa HOM05D005683 ORTHO05D006958 3.8e-22 109.0 123 43.9
TWI38G0326 Tripterygium wilfordii HOM05D005683 ORTHO05D006958 3.8e-22 109.0 147 42.2
Duzib235G0662 Durio zibethinus HOM05D005683 ORTHO05D006958 5.0e-22 108.6 124 49.2
Gohir.A05G166700 Gossypium hirsutum HOM05D005683 ORTHO05D006958 5.0e-22 108.6 150 44.0
Gohir.D05G169700 Gossypium hirsutum HOM05D005683 ORTHO05D006958 5.0e-22 108.6 150 44.0
Gorai.009G174900 Gossypium raimondii HOM05D005683 ORTHO05D006958 5.0e-22 108.6 150 44.0
Prupe.4G033900 Prunus persica HOM05D005683 ORTHO05D006958 5.0e-22 108.6 140 46.4
CiPaw.09G156400 Carya illinoinensis HOM05D005683 ORTHO05D006958 6.5e-22 108.2 149 41.6
Glyma.08G060400 Glycine max HOM05D005683 ORTHO05D006958 6.5e-22 108.2 120 45.8
Gohir.A10G019100 Gossypium hirsutum HOM05D005683 ORTHO05D006958 6.5e-22 108.2 147 42.2
Rhsim02G0118200 Rhododendron simsii HOM05D005683 ORTHO05D006958 8.5e-22 107.8 149 40.9
Rhsim02G0118400 Rhododendron simsii HOM05D005683 ORTHO05D006958 8.5e-22 107.8 149 40.9
CAN.G424.37 Capsicum annuum HOM05D005683 ORTHO05D006958 1.1e-21 107.5 146 43.2
Lalb_Chr09g0327231 Lupinus albus HOM05D005683 ORTHO05D006958 1.1e-21 107.5 126 43.7
MD05G1328900 Malus domestica HOM05D005683 ORTHO05D006958 1.1e-21 107.5 137 44.5
AT1G11380 Arabidopsis thaliana HOM05D005683 ORTHO05D006958 1.5e-21 107.1 147 41.5
Medtr4g091550 Medicago truncatula HOM05D005683 ORTHO05D006958 1.5e-21 107.1 148 42.6
CANSAT56G4448 Cannabis sativa HOM05D005683 ORTHO05D006958 1.9e-21 106.7 150 40.0
unitig_748.g7566 Utricularia gibba HOM05D005683 ORTHO05D006958 1.9e-21 106.7 182 40.1
CiPaw.10G115800 Carya illinoinensis HOM05D005683 ORTHO05D006958 2.5e-21 106.3 148 43.2
Ciclev10016376m.g Citrus clementina HOM05D005683 ORTHO05D006958 2.5e-21 106.3 183 38.8
Nitab4.5_0005620g0030 Nicotiana tabacum HOM05D005683 ORTHO05D006958 2.5e-21 106.3 169 39.6
Potri.011G040100 Populus trichocarpa HOM05D005683 ORTHO05D006958 2.5e-21 106.3 119 44.5
Lsat_1_v5_gn_7_20320 Lactuca sativa HOM05D005683 ORTHO05D006958 3.2e-21 105.9 147 42.2
FAN21G2210 Fragaria x ananassa HOM05D005683 ORTHO05D006958 7.2e-21 104.8 179 38.5
Manes.16G019184 Manihot esculenta HOM05D005683 ORTHO05D006958 7.2e-21 104.8 147 44.9
Thecc.06G202400 Theobroma cacao HOM05D005683 ORTHO05D006958 9.4e-21 104.4 154 39.0
Ah.09g236340 Amaranthus hybridus HOM05D005683 ORTHO05D006958 2.1e-20 103.2 125 44.0
COL.COLO4_31635 Corchorus olitorius HOM05D005683 ORTHO05D006958 2.7e-20 102.8 181 38.7
arahy.Tifrunner.gnm1.ann1.NC80VA Arachis hypogaea HOM05D005683 ORTHO05D006958 4.7e-20 102.1 189 36.0
DCAR_004160 Daucus carota HOM05D005683 ORTHO05D006958 4.7e-20 102.1 185 37.3
MBI02_g38754_MAGBIO Magnolia biondii HOM05D005683 ORTHO05D006958 4.7e-20 102.1 201 34.8
Gorai.011G021200 Gossypium raimondii HOM05D005683 ORTHO05D006958 6.1e-20 101.7 147 40.1
Lj2A278T71 Lonicera japonica HOM05D005683 ORTHO05D006958 6.1e-20 101.7 147 40.1
TAR627G0612 Trochodendron aralioides HOM05D005683 ORTHO05D006958 6.1e-20 101.7 149 38.9
FAN25G1197 Fragaria x ananassa HOM05D005683 ORTHO05D006958 1.0e-19 100.9 179 38.0
Hund21293 Selenicereus undatus HOM05D005683 ORTHO05D006958 1.4e-19 100.5 124 41.9
Gohir.D10G020000 Gossypium hirsutum HOM05D005683 ORTHO05D006958 1.8e-19 100.1 147 39.5
Potri.004G026700 Populus trichocarpa HOM05D005683 ORTHO05D006958 1.8e-19 100.1 120 43.3
THA.LOC104818970 Tarenaya hassleriana HOM05D005683 ORTHO05D006958 1.8e-19 100.1 147 40.1
RcHm_v2.0_Chr5g0005711 Rosa chinensis HOM05D005683 ORTHO05D006958 3.0e-19 99.4 177 39.5
Nn1g03823 Nelumbo nucifera HOM05D005683 ORTHO05D006958 8.8e-19 97.8 151 37.7
Hund23579 Selenicereus undatus HOM05D005683 ORTHO05D006958 1.5e-18 97.1 149 40.9
arahy.Tifrunner.gnm1.ann1.B3SD72 Arachis hypogaea HOM05D005683 ORTHO05D006958 2.0e-18 96.7 189 36.0
HanXRQChr15g0482541 Helianthus annuus HOM05D005683 ORTHO05D006958 2.0e-18 96.7 147 38.8
Lj1A1216T22 Lonicera japonica HOM05D005683 ORTHO05D006958 9.8e-18 94.4 146 41.1
TAR626G0062 Trochodendron aralioides HOM05D005683 ORTHO05D006958 1.7e-17 93.6 148 38.5
vmacro15855 Vaccinium macrocarpon HOM05D005683 ORTHO05D006958 1.7e-17 93.6 76 59.2
CARHR011620 Cardamine hirsuta HOM05D005683 ORTHO05D006958 2.8e-17 92.8 149 38.3
HPP92_000912 Vanilla planifolia HOM05D005683 ORTHO05D006958 2.4e-16 89.7 124 41.9
ECA236G4035 Erigeron canadensis HOM05D005683 ORTHO05D006958 3.1e-16 89.4 123 42.3
ATR1132G083 Amborella trichopoda HOM05D005683 ORTHO05D006958 1.0e-14 84.3 119 37.8
MBI02_g46153_MAGBIO Magnolia biondii HOM05D005683 ORTHO05D006958 4.7e-12 75.5 200 32.5
TAR629G2478 Trochodendron aralioides HOM05D005683 ORTHO05D006958 5.2e-11 72.0 73 49.3
CDE02G0678 Ceratophyllum demersum HOM05D005683 ORTHO05D006958 5.7e-10 68.6 153 31.4
CDE05G0673 Ceratophyllum demersum HOM05D005683 ORTHO05D006958 1.8e-08 63.5 84 40.5
Eucgr.B00708 Eucalyptus grandis HOM05D000414 ORTHO05D000276 3.5e-07 59.3 115 31.3
GSVIVG01031754001 Vitis vinifera HOM05D000414 ORTHO05D000276 2.3e-06 56.6 109 29.4


User provided reference genes

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