Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold42G16087 Striga asiatica HOM05D000100 ORTHO05D406528 2.3e-122 442.2 219 100.0
SGA_v2.0_scaffold73G24414 Striga asiatica HOM05D000100 ORTHO05D000052 1.1e-10 71.2 71 53.5
ECA233G0717 Erigeron canadensis HOM05D000100 ORTHO05D000052 2.3e-08 63.5 73 49.3
Oeu036760.1 Olea europaea HOM05D000100 ORTHO05D000052 5.0e-08 62.4 72 40.3
AL7G40350 Arabidopsis lyrata HOM05D000100 ORTHO05D000052 5.6e-07 58.9 80 41.2
MSTRG.6595 Avicennia marina HOM05D000100 ORTHO05D000052 5.6e-07 58.9 74 45.9
Nn7g38337 Nelumbo nucifera HOM05D000100 ORTHO05D000052 9.5e-07 58.2 75 44.0
Lj1P1046T32 Lonicera japonica HOM05D000100 ORTHO05D000052 1.2e-06 57.8 78 42.3
MD09G1141200 Malus domestica HOM05D000100 ORTHO05D000052 1.2e-06 57.8 77 41.6
MD09G1141700 Malus domestica HOM05D000100 ORTHO05D000052 1.2e-06 57.8 77 41.6
Nn2g12386 Nelumbo nucifera HOM05D000100 ORTHO05D000052 1.2e-06 57.8 94 38.3
Potri.016G017300 Populus trichocarpa HOM05D000100 ORTHO05D000052 1.2e-06 57.8 98 41.8
BcaC06g33400 Brassica carinata HOM05D000100 ORTHO05D000052 1.6e-06 57.4 67 46.3
C01p42430 Brassica napus HOM05D000100 ORTHO05D000052 1.6e-06 57.4 92 40.2
C07p47080 Brassica napus HOM05D000100 ORTHO05D000052 1.6e-06 57.4 67 46.3
FvH4_6g39380 Fragaria vesca HOM05D000100 ORTHO05D000052 1.6e-06 57.4 79 39.2
FAN02G2784 Fragaria x ananassa HOM05D000100 ORTHO05D000052 1.6e-06 57.4 79 39.2
FAN05G5499 Fragaria x ananassa HOM05D000100 ORTHO05D000052 1.6e-06 57.4 79 39.2
BcaC09g49112 Brassica carinata HOM05D000100 ORTHO05D000052 2.1e-06 57.0 79 44.3
BcaC09g49116 Brassica carinata HOM05D000100 ORTHO05D000052 2.1e-06 57.0 79 44.3
BolC1t04200H Brassica oleracea HOM05D000100 ORTHO05D000052 2.1e-06 57.0 79 44.3
HanXRQChr13g0422111 Helianthus annuus HOM05D000100 ORTHO05D000052 2.1e-06 57.0 76 42.1
Lj4P840T21 Lonicera japonica HOM05D000100 ORTHO05D000052 2.1e-06 57.0 70 41.4
BcaC06g32925 Brassica carinata HOM05D000100 ORTHO05D000052 2.8e-06 56.6 64 43.8
A01p33240 Brassica napus HOM05D000100 ORTHO05D000052 2.8e-06 56.6 78 43.6
Lj1P1045T27 Lonicera japonica HOM05D000100 ORTHO05D000052 2.8e-06 56.6 78 42.3
BraA01t03442Z Brassica rapa HOM05D000100 ORTHO05D000052 3.6e-06 56.2 78 43.6
Lj1P1047T16 Lonicera japonica HOM05D000100 ORTHO05D000052 3.6e-06 56.2 78 38.5
Lj4P842T35 Lonicera japonica HOM05D000100 ORTHO05D000052 3.6e-06 56.2 78 41.0
BraA03t13998Z Brassica rapa HOM05D000100 ORTHO05D000052 4.7e-06 55.8 67 44.8
ECA240G3830 Erigeron canadensis HOM05D000100 ORTHO05D000052 4.7e-06 55.8 80 40.0
Thhalv10025075m.g Eutrema salsugineum HOM05D000100 ORTHO05D000052 4.7e-06 55.8 64 46.9
BcaC01g03484 Brassica carinata HOM05D000100 ORTHO05D000052 6.1e-06 55.5 90 34.4
C03p51990 Brassica napus HOM05D000100 ORTHO05D000052 6.1e-06 55.5 90 34.4
BolC3t17481H Brassica oleracea HOM05D000100 ORTHO05D000052 6.1e-06 55.5 90 34.4
HanXRQChr13g0422091 Helianthus annuus HOM05D000100 ORTHO05D000052 6.1e-06 55.5 79 40.5
Nn1g01921 Nelumbo nucifera HOM05D000100 ORTHO05D000052 6.1e-06 55.5 95 37.9
Prupe.3G184600 Prunus persica HOM05D000100 ORTHO05D000052 6.1e-06 55.5 79 41.8
Sabra16G0018200 Salix brachista HOM05D000100 ORTHO05D000052 6.1e-06 55.5 76 44.7
BcaB04g19184 Brassica carinata HOM05D000100 ORTHO05D000052 8.0e-06 55.1 91 36.3
Cc00_g30350 Coffea canephora HOM05D000100 ORTHO05D000052 8.0e-06 55.1 76 38.2
Potri.006G007600 Populus trichocarpa HOM05D000100 ORTHO05D000052 8.0e-06 55.1 83 44.6
Potri.016G017100 Populus trichocarpa HOM05D000100 ORTHO05D000052 8.0e-06 55.1 70 47.1
Potri.016G017232 Populus trichocarpa HOM05D000100 ORTHO05D000052 8.0e-06 55.1 70 47.1
Sabra16G0018900 Salix brachista HOM05D000100 ORTHO05D000052 8.0e-06 55.1 71 47.9


User provided reference genes

Program Settings