Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold42G16062 Striga asiatica HOM05D004654 ORTHO05D005414 6.2e-109 397.5 207 100.0
Oeu034013.1 Olea europaea HOM05D004654 ORTHO05D005414 1.1e-25 120.9 211 42.2
Oeu024775.2 Olea europaea HOM05D004654 ORTHO05D005414 4.3e-25 119.0 214 42.5
SGA_v2.0_scaffold8G04582 Striga asiatica HOM05D004654 ORTHO05D005414 2.3e-23 113.2 210 42.4
SalBow6G0287 Salvia bowleyana HOM05D004654 ORTHO05D005414 4.0e-23 112.5 204 43.6
unitig_90.g27472 Utricularia gibba HOM05D004654 ORTHO05D005414 1.2e-22 110.9 148 45.9
Solyc03g031950.3 Solanum lycopersicum HOM05D004654 ORTHO05D005414 1.0e-18 97.8 229 36.7
SGA_v2.0_scaffold247G44889 Striga asiatica HOM05D004654 ORTHO05D005414 1.3e-18 97.4 190 40.0
Migut.D00607 Erythranthe guttata HOM05D004654 ORTHO05D005414 2.3e-18 96.7 213 36.6
PGSC0003DMG400024083 Solanum tuberosum HOM05D004654 ORTHO05D005414 2.3e-18 96.7 228 37.3
Nitab4.5_0008713g0040 Nicotiana tabacum HOM05D004654 ORTHO05D005414 3.0e-18 96.3 225 35.6
Sopen03g005810 Solanum pennellii HOM05D004654 ORTHO05D005414 3.0e-18 96.3 229 36.2
Nitab4.5_0000235g0010 Nicotiana tabacum HOM05D004654 ORTHO05D005414 3.9e-18 95.9 225 36.0
PGSC0003DMG400037923 Solanum tuberosum HOM05D004654 ORTHO05D005414 1.1e-15 87.8 216 36.6
Nitab4.5_0003016g0040 Nicotiana tabacum HOM05D004654 ORTHO05D005414 1.4e-15 87.4 217 35.0
unitig_85.g27201 Utricularia gibba HOM05D004654 ORTHO05D005414 1.2e-14 84.3 160 38.8
Cc07_g12430 Coffea canephora HOM05D004654 ORTHO05D005414 5.8e-14 82.0 202 32.2
Actinidia17131 Actinidia chinensis HOM05D004654 ORTHO05D005414 2.2e-13 80.1 202 38.1
THA.LOC104822158 Tarenaya hassleriana HOM05D004654 ORTHO05D005414 4.9e-13 79.0 191 37.7
DCAR_002994 Daucus carota HOM05D004654 ORTHO05D005414 8.4e-13 78.2 189 37.6
Peaxi162Scf00918g00026 Petunia axillaris HOM05D004654 ORTHO05D005414 1.4e-12 77.4 229 36.7
Manes.02G082600 Manihot esculenta HOM05D004654 ORTHO05D005414 2.7e-11 73.2 203 35.5
Ciclev10012875m.g Citrus clementina HOM05D004654 ORTHO05D005414 3.5e-11 72.8 186 35.5
unitig_578.g16656 Utricularia gibba HOM05D004654 ORTHO05D005414 3.5e-11 72.8 109 42.2
Dinv28280 Davidia involucrata HOM05D004654 ORTHO05D005414 4.6e-11 72.4 206 34.5
Rhsim08G0023400 Rhododendron simsii HOM05D004654 ORTHO05D005414 4.6e-11 72.4 202 35.6
unitig_0.g296 Utricularia gibba HOM05D004654 ORTHO05D005414 7.8e-11 71.6 128 43.0
Lsat_1_v5_gn_3_68821 Lactuca sativa HOM05D004654 ORTHO05D005414 1.0e-10 71.2 194 36.1
Dinv19105 Davidia involucrata HOM05D004654 ORTHO05D005414 2.3e-10 70.1 143 39.2
THA.LOC104805666 Tarenaya hassleriana HOM05D004654 ORTHO05D005414 3.0e-10 69.7 190 34.2
Lsat_1_v5_gn_8_113741 Lactuca sativa HOM05D004654 ORTHO05D005414 5.1e-10 68.9 207 36.2
Manes.01G125100 Manihot esculenta HOM05D004654 ORTHO05D005414 8.7e-10 68.2 191 35.6
A07p32950 Brassica napus HOM05D004654 ORTHO05D005414 1.1e-09 67.8 194 30.4
Cpa.g.sc108.18 Carica papaya HOM05D004654 ORTHO05D005414 1.1e-09 67.8 201 33.3
HanXRQChr16g0532651 Helianthus annuus HOM05D004654 ORTHO05D005414 1.1e-09 67.8 204 35.3
BolC6t39010H Brassica oleracea HOM05D004654 ORTHO05D005414 4.3e-09 65.9 196 31.6
vmacro20421 Vaccinium macrocarpon HOM05D004654 ORTHO05D005414 7.3e-09 65.1 191 33.0
vmacro23510 Vaccinium macrocarpon HOM05D004654 ORTHO05D005414 9.6e-09 64.7 191 33.5
GSVIVG01005258001 Vitis vinifera HOM05D004654 ORTHO05D005414 9.6e-09 64.7 173 35.3
Aqoxy5G02573 Aquilegia oxysepala HOM05D004654 ORTHO05D005414 1.2e-08 64.3 212 32.5
Hma1.2p1_0034F.1_g021540 Hydrangea macrophylla HOM05D004654 ORTHO05D005414 1.6e-08 63.9 196 35.2
Atru.chr1.2194 Acer truncatum HOM05D004654 ORTHO05D005414 2.8e-08 63.2 191 37.2
BraA07t30922Z Brassica rapa HOM05D004654 ORTHO05D005414 2.8e-08 63.2 195 30.3
Hma1.2p1_0085F.1_g044140 Hydrangea macrophylla HOM05D004654 ORTHO05D005414 3.6e-08 62.8 209 33.0
QL02p054970 Quercus lobata HOM05D004654 ORTHO05D005414 3.6e-08 62.8 197 33.0
QL02p056026 Quercus lobata HOM05D004654 ORTHO05D005414 3.6e-08 62.8 209 33.0
C06p39170 Brassica napus HOM05D004654 ORTHO05D005414 6.2e-08 62.0 196 31.1
Hma1.2p1_2924F.1_g330430 Hydrangea macrophylla HOM05D004654 ORTHO05D005414 6.2e-08 62.0 211 32.7
Potri.017G142100 Populus trichocarpa HOM05D004654 ORTHO05D005414 6.2e-08 62.0 187 33.7
ClCG05G011320 Citrullus lanatus HOM05D004654 ORTHO05D005414 8.1e-08 61.6 209 31.1
Glyma.11G204100 Glycine max HOM05D004654 ORTHO05D005414 8.1e-08 61.6 200 33.0
HanXRQChr15g0485191 Helianthus annuus HOM05D004654 ORTHO05D005414 8.1e-08 61.6 204 32.8
Glyma.18G046900 Glycine max HOM05D004654 ORTHO05D005414 1.1e-07 61.2 209 32.5
Sp5g20670 Schrenkiella parvula HOM05D004654 ORTHO05D005414 1.1e-07 61.2 196 31.6
CiPaw.07G102900 Carya illinoinensis HOM05D004654 ORTHO05D005414 1.4e-07 60.8 202 34.2
Psat5g143960 Pisum sativum HOM05D004654 ORTHO05D005414 1.4e-07 60.8 185 30.3
arahy.Tifrunner.gnm1.ann1.6F687N Arachis hypogaea HOM05D004654 ORTHO05D005414 1.8e-07 60.5 195 31.3
arahy.Tifrunner.gnm1.ann1.C1RHT9 Arachis hypogaea HOM05D004654 ORTHO05D005414 1.8e-07 60.5 187 34.8
ECA246G3021 Erigeron canadensis HOM05D004654 ORTHO05D005414 1.8e-07 60.5 192 30.2
THA.LOC104823831 Tarenaya hassleriana HOM05D004654 ORTHO05D005414 1.8e-07 60.5 190 32.1
EL10Ac4g08895 Beta vulgaris HOM05D004654 ORTHO05D005414 3.1e-07 59.7 95 41.1
CiPaw.03G008900 Carya illinoinensis HOM05D004654 ORTHO05D005414 3.1e-07 59.7 200 34.5
FAN28G0874 Fragaria x ananassa HOM05D004654 ORTHO05D005414 6.9e-07 58.5 191 31.4
Gohir.A08G038100 Gossypium hirsutum HOM05D004654 ORTHO05D005414 6.9e-07 58.5 181 34.8
Aa31LG2G2610 Aethionema arabicum HOM05D004654 ORTHO05D005414 9.0e-07 58.2 196 31.6
BolC2t08298H Brassica oleracea HOM05D004654 ORTHO05D005414 9.0e-07 58.2 186 32.3
CsaV3_3G021140 Cucumis sativus L. HOM05D004654 ORTHO05D005414 9.0e-07 58.2 196 31.1
FAN28G0174 Fragaria x ananassa HOM05D004654 ORTHO05D005414 9.0e-07 58.2 191 31.9
Lj6g0008387 Lotus japonicus HOM05D004654 ORTHO05D005414 1.2e-06 57.8 193 31.1
AL2G22850 Arabidopsis lyrata HOM05D004654 ORTHO05D005414 1.5e-06 57.4 188 31.9
Gorai.008G054900 Gossypium raimondii HOM05D004654 ORTHO05D005414 1.5e-06 57.4 190 31.1
Sabra17G0119000 Salix brachista HOM05D004654 ORTHO05D005414 1.5e-06 57.4 189 31.2
CARHR057580 Cardamine hirsuta HOM05D004654 ORTHO05D005414 2.0e-06 57.0 184 31.0
Gohir.D12G051600 Gossypium hirsutum HOM05D004654 ORTHO05D005414 2.0e-06 57.0 190 31.1
MELO3C020251.2 Cucumis melo HOM05D004654 ORTHO05D005414 2.6e-06 56.6 200 32.0
FAN26G0407 Fragaria x ananassa HOM05D004654 ORTHO05D005414 2.6e-06 56.6 193 32.1
HanXRQChr15g0486441 Helianthus annuus HOM05D004654 ORTHO05D005414 2.6e-06 56.6 161 34.2
AT1G65720 Arabidopsis thaliana HOM05D004654 ORTHO05D005414 3.4e-06 56.2 188 30.9
arahy.Tifrunner.gnm1.ann1.70EH4T Arachis hypogaea HOM05D004654 ORTHO05D005414 3.4e-06 56.2 195 29.7
Carub.0002s1154 Capsella rubella HOM05D004654 ORTHO05D005414 3.4e-06 56.2 193 31.1
CiPaw.13G067300 Carya illinoinensis HOM05D004654 ORTHO05D005414 3.4e-06 56.2 218 31.2
Phvul.006G084100 Phaseolus vulgaris HOM05D004654 ORTHO05D005414 3.4e-06 56.2 203 33.0
Ca_15106_v3 Cicer arietinum L. HOM05D004654 ORTHO05D005414 4.4e-06 55.8 202 29.2
DCAR_014130 Daucus carota HOM05D004654 ORTHO05D005414 4.4e-06 55.8 172 33.1
FAN19G2236 Fragaria x ananassa HOM05D004654 ORTHO05D005414 4.4e-06 55.8 191 31.4
Gohir.D08G048300 Gossypium hirsutum HOM05D004654 ORTHO05D005414 4.4e-06 55.8 181 34.8
Gorai.004G047800 Gossypium raimondii HOM05D004654 ORTHO05D005414 4.4e-06 55.8 181 34.8
Lsat_1_v5_gn_2_72380 Lactuca sativa HOM05D004654 ORTHO05D005414 4.4e-06 55.8 140 37.1
TPR.G37307 Trifolium pratense HOM05D004654 ORTHO05D005414 5.8e-06 55.5 192 28.1
CANSAT78G0950 Cannabis sativa HOM05D004654 ORTHO05D005414 7.6e-06 55.1 200 30.0
AUR62004739 Chenopodium quinoa HOM05D004654 ORTHO05D005414 7.6e-06 55.1 211 31.8
Haze_14051 Corylus avellana HOM05D004654 ORTHO05D005414 7.6e-06 55.1 166 31.9
Potri.004G078500 Populus trichocarpa HOM05D004654 ORTHO05D005414 9.9e-06 54.7 204 30.4


User provided reference genes

Program Settings