Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold42G16024 Striga asiatica HOM05D006386 ORTHO05D007575 3.5e-144 515.0 268 100.0
SalBow1G4471 Salvia bowleyana HOM05D006386 ORTHO05D007575 1.4e-76 290.4 265 60.4
Migut.D01482 Erythranthe guttata HOM05D006386 ORTHO05D007575 1.5e-75 287.0 266 60.9
MSTRG.4502 Avicennia marina HOM05D006386 ORTHO05D007575 1.8e-68 263.5 266 57.5
Oeu010193.1 Olea europaea HOM05D006386 ORTHO05D007575 7.1e-65 251.5 264 54.2
CSS0007083 Camellia sinensis var. sinensis HOM05D006386 ORTHO05D007575 3.2e-57 226.1 264 50.4
Ciclev10021913m.g Citrus clementina HOM05D006386 ORTHO05D007575 3.2e-57 226.1 264 48.9
Atru.chr9.671 Acer truncatum HOM05D006386 ORTHO05D007575 3.6e-56 222.6 268 47.8
GSVIVG01008195001 Vitis vinifera HOM05D006386 ORTHO05D007575 3.6e-56 222.6 264 48.5
Dinv36853 Davidia involucrata HOM05D006386 ORTHO05D007575 1.0e-55 221.1 264 48.9
COL.COLO4_08656 Corchorus olitorius HOM05D006386 ORTHO05D007575 2.8e-53 213.0 264 47.3
Nitab4.5_0000646g0180 Nicotiana tabacum HOM05D006386 ORTHO05D007575 3.7e-53 212.6 266 45.1
unitig_62.g23762 Utricularia gibba HOM05D006386 ORTHO05D007575 4.8e-53 212.2 248 50.4
Cc04_g07860 Coffea canephora HOM05D006386 ORTHO05D007575 5.3e-52 208.8 268 45.1
CANSAT80G2620 Cannabis sativa HOM05D006386 ORTHO05D007575 2.6e-51 206.5 261 46.0
Actinidia36923 Actinidia chinensis HOM05D006386 ORTHO05D007575 1.0e-50 204.5 265 44.9
Solyc03g114520.3 Solanum lycopersicum HOM05D006386 ORTHO05D007575 1.0e-50 204.5 266 45.1
PGSC0003DMG400024511 Solanum tuberosum HOM05D006386 ORTHO05D007575 3.8e-50 202.6 266 44.4
Nitab4.5_0004342g0080 Nicotiana tabacum HOM05D006386 ORTHO05D007575 5.0e-50 202.2 266 43.2
AUR62032161 Chenopodium quinoa HOM05D006386 ORTHO05D007575 8.5e-50 201.4 266 45.5
Hma1.2p1_0340F.1_g130200 Hydrangea macrophylla HOM05D006386 ORTHO05D007575 1.1e-49 201.1 267 47.6
Duzib068G0691 Durio zibethinus HOM05D006386 ORTHO05D007575 3.2e-49 199.5 264 43.9
Gorai.007G040700 Gossypium raimondii HOM05D006386 ORTHO05D007575 3.2e-49 199.5 264 44.7
RcHm_v2.0_Chr7g0184161 Rosa chinensis HOM05D006386 ORTHO05D007575 4.2e-49 199.1 266 43.2
Sopen03g033610 Solanum pennellii HOM05D006386 ORTHO05D007575 4.2e-49 199.1 266 44.7
Gohir.D11G038000 Gossypium hirsutum HOM05D006386 ORTHO05D007575 1.2e-48 197.6 264 44.3
Nn3g17620 Nelumbo nucifera HOM05D006386 ORTHO05D007575 2.1e-48 196.8 264 45.5
Thecc.03G113300 Theobroma cacao HOM05D006386 ORTHO05D007575 3.6e-48 196.1 264 43.9
Gohir.A11G034600 Gossypium hirsutum HOM05D006386 ORTHO05D007575 1.8e-47 193.7 264 42.8
Lj9A435T83 Lonicera japonica HOM05D006386 ORTHO05D007575 2.0e-46 190.3 260 44.2
QL10p021984 Quercus lobata HOM05D006386 ORTHO05D007575 3.3e-46 189.5 260 44.6
TAR629G0047 Trochodendron aralioides HOM05D002187 ORTHO05D002243 5.7e-46 188.7 212 50.5
Potri.015G055500 Populus trichocarpa HOM05D006386 ORTHO05D007575 2.8e-45 186.4 264 42.8
CiPaw.16G081700 Carya illinoinensis HOM05D006386 ORTHO05D007575 6.3e-45 185.3 264 43.6
HanXRQChr16g0502011 Helianthus annuus HOM05D006386 ORTHO05D007575 6.3e-45 185.3 261 42.5
THA.LOC104819388 Tarenaya hassleriana HOM05D006386 ORTHO05D007575 6.3e-45 185.3 233 45.1
FvH4_5g13000 Fragaria vesca HOM05D006386 ORTHO05D007575 1.1e-44 184.5 266 40.6
FAN13G1489 Fragaria x ananassa HOM05D006386 ORTHO05D007575 1.1e-44 184.5 266 40.6
FAN18G3466 Fragaria x ananassa HOM05D006386 ORTHO05D007575 2.4e-44 183.3 266 40.2
FAN08G0928 Fragaria x ananassa HOM05D006386 ORTHO05D007575 4.1e-44 182.6 266 39.8
EL10Ac9g20981 Beta vulgaris HOM05D006386 ORTHO05D007575 9.1e-44 181.4 265 43.8
Cfa019518 Carpinus fangiana HOM05D006386 ORTHO05D007575 9.1e-44 181.4 263 43.0
Hund02537 Selenicereus undatus HOM05D006386 ORTHO05D007575 1.2e-43 181.0 264 42.4
Manes.01G023400 Manihot esculenta HOM05D006386 ORTHO05D007575 2.0e-43 180.3 266 40.6
Eucgr.K02638 Eucalyptus grandis HOM05D006386 ORTHO05D007575 2.6e-43 179.9 265 41.1
MSTRG.4503 Avicennia marina HOM05D006386 ORTHO05D007575 3.5e-43 179.5 205 50.2
TWI81G0025 Tripterygium wilfordii HOM05D006386 ORTHO05D007575 5.9e-43 178.7 264 43.6
vmacro17651 Vaccinium macrocarpon HOM05D006386 ORTHO05D007575 1.3e-42 177.6 200 48.0
PSO017G3209 Papaver somniferum HOM05D006386 ORTHO05D007575 2.9e-42 176.4 274 38.7
PGR044G0997 Punica granatum HOM05D006386 ORTHO05D007575 1.1e-41 174.5 259 42.5
Sed0015508 Sechium edule HOM05D006386 ORTHO05D007575 1.1e-41 174.5 224 45.5
PSO478G3500 Papaver somniferum HOM05D006386 ORTHO05D007575 2.5e-41 173.3 274 38.0
AL7G44320 Arabidopsis lyrata HOM05D006386 ORTHO05D007575 7.2e-41 171.8 235 43.4
Sabra15G0080700 Salix brachista HOM05D006386 ORTHO05D007575 7.2e-41 171.8 290 38.3
Aa31LG4G9830 Aethionema arabicum HOM05D006386 ORTHO05D007575 2.1e-40 170.2 236 44.5
Thhalv10003465m.g Eutrema salsugineum HOM05D006386 ORTHO05D007575 6.1e-40 168.7 266 41.0
Lsat_1_v5_gn_4_112761 Lactuca sativa HOM05D006386 ORTHO05D007575 1.0e-39 167.9 268 41.0
Lalb_Chr13g0302571 Lupinus albus HOM05D006386 ORTHO05D007575 1.8e-39 167.2 268 38.4
AT5G35520 Arabidopsis thaliana HOM05D006386 ORTHO05D007575 6.7e-39 165.2 235 42.6
MD14G1218500 Malus domestica HOM05D006386 ORTHO05D007575 2.0e-38 163.7 264 39.4
Sc04g0004070 Simmondsia chinensis HOM05D006386 ORTHO05D007575 2.6e-38 163.3 230 43.5
CARHR217490 Cardamine hirsuta HOM05D006386 ORTHO05D007575 3.3e-38 162.9 236 42.4
BcaB06g26945 Brassica carinata HOM05D006386 ORTHO05D007575 5.7e-38 162.2 266 39.1
Carub.0007s3127 Capsella rubella HOM05D006386 ORTHO05D007575 5.7e-38 162.2 235 41.7
TPR.G23873 Trifolium pratense HOM05D006386 ORTHO05D007575 5.7e-38 162.2 258 40.3
ECA246G4419 Erigeron canadensis HOM05D006386 ORTHO05D007575 7.4e-38 161.8 266 40.2
Ca_21735_v3 Cicer arietinum L. HOM05D006386 ORTHO05D007575 2.2e-37 160.2 265 39.2
Glyma.17G083800 Glycine max HOM05D006386 ORTHO05D007575 2.2e-37 160.2 261 39.5
Medtr4g112830 Medicago truncatula HOM05D006386 ORTHO05D007575 3.7e-37 159.5 263 39.5
Lsat_1_v5_gn_4_112801 Lactuca sativa HOM05D006386 ORTHO05D007575 6.3e-37 158.7 271 39.1
CDE02G3865 Ceratophyllum demersum HOM05D006386 ORTHO05D007575 8.2e-37 158.3 231 39.8
ClCG06G015230 Citrullus lanatus HOM05D006386 ORTHO05D007575 1.1e-36 157.9 266 38.0
Lj6g0003397 Lotus japonicus HOM05D006386 ORTHO05D007575 1.4e-36 157.5 261 39.1
Medtr4g112610 Medicago truncatula HOM05D006386 ORTHO05D007575 2.4e-36 156.8 266 38.7
arahy.Tifrunner.gnm1.ann1.3Z7JIG Arachis hypogaea HOM05D006386 ORTHO05D007575 5.3e-36 155.6 262 40.8
arahy.Tifrunner.gnm1.ann1.HL5ANR Arachis hypogaea HOM05D006386 ORTHO05D007575 9.1e-36 154.8 262 40.8
Sp7g06840 Schrenkiella parvula HOM05D006386 ORTHO05D007575 9.1e-36 154.8 235 40.9
ATR0730G046 Amborella trichopoda HOM05D006386 ORTHO05D007575 2.6e-35 153.3 264 37.1
Phvul.003G180600 Phaseolus vulgaris HOM05D006386 ORTHO05D007575 4.5e-35 152.5 261 36.4
Glyma.05G016300 Glycine max HOM05D006386 ORTHO05D007575 7.7e-35 151.8 260 36.9
VMungo1215G2864 Vigna mungo HOM05D006386 ORTHO05D007575 1.7e-34 150.6 261 36.8
Aqoxy6G00629 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 3.8e-34 149.4 259 38.2
BcaC02g09476 Brassica carinata HOM05D006386 ORTHO05D007575 1.1e-33 147.9 261 37.9
BolC4t25901H Brassica oleracea HOM05D006386 ORTHO05D007575 1.9e-33 147.1 261 37.9
Phvul.002G142200 Phaseolus vulgaris HOM05D006386 ORTHO05D007575 1.9e-33 147.1 261 36.8
ECA232G1078 Erigeron canadensis HOM05D006386 ORTHO05D007575 3.2e-33 146.4 261 37.9
Actinidia33576 Actinidia chinensis HOM05D006386 ORTHO05D007575 7.2e-33 145.2 274 39.1
C04p43230 Brassica napus HOM05D006386 ORTHO05D007575 7.2e-33 145.2 261 37.5
Peaxi162Scf00119g00118 Petunia axillaris HOM05D006386 ORTHO05D007575 1.2e-32 144.4 275 36.4
SHI18989 Sapria himalayana HOM05D006386 ORTHO05D007575 3.6e-32 142.9 201 44.3
Prupe.5G212600 Prunus persica HOM05D006386 ORTHO05D007575 6.1e-32 142.1 261 37.2
arahy.Tifrunner.gnm1.ann1.X9R15Y Arachis hypogaea HOM05D006386 ORTHO05D007575 4.0e-31 139.4 273 37.7
Psat4g044400 Pisum sativum HOM05D006386 ORTHO05D007575 1.7e-29 134.0 263 37.6
BraA04t16635Z Brassica rapa HOM05D006386 ORTHO05D007575 1.8e-28 130.6 222 38.3
A04p09730 Brassica napus HOM05D006386 ORTHO05D007575 2.4e-28 130.2 222 37.8
Aqoxy3G00630 Aquilegia oxysepala HOM05D006386 ORTHO05D007575 3.8e-26 122.9 260 33.8
MBI10_g16789_MAGBIO Magnolia biondii HOM05D006386 ORTHO05D007575 1.1e-25 121.3 198 39.9
HPP92_015441 Vanilla planifolia HOM05D006386 ORTHO05D007575 1.5e-25 120.9 214 35.5
MD06G1208100 Malus domestica HOM05D006386 ORTHO05D007575 3.6e-24 116.3 208 36.5
CsaV3_1G003130 Cucumis sativus L. HOM05D006386 ORTHO05D007575 6.8e-23 112.1 264 34.5
Nitab4.5_0005402g0030 Nicotiana tabacum HOM05D002295 ORTHO05D007575 6.8e-23 112.1 233 36.5
Cpa.g.sc53.23 Carica papaya HOM05D006386 ORTHO05D007575 2.2e-21 107.1 76 67.1
CAN.G982.14 Capsicum annuum HOM05D006386 ORTHO05D007575 2.4e-20 103.6 149 41.6
Os02g0620100 Oryza sativa ssp. japonica HOM05D006386 ORTHO05D007575 1.1e-17 94.7 230 30.0
arahy.Tifrunner.gnm1.ann1.7DA3AY Arachis hypogaea HOM05D006386 ORTHO05D007575 2.1e-16 90.5 260 31.9
AUR62036917 Chenopodium quinoa HOM05D006386 ORTHO05D007575 6.1e-16 89.0 156 37.2
Zm00001eb433940 Zea mays HOM05D006386 ORTHO05D007575 1.0e-15 88.2 226 27.0
Zm00001eb065850 Zea mays HOM05D006386 ORTHO05D007575 6.8e-15 85.5 225 28.0
Actinidia27067 Actinidia chinensis HOM05D006386 ORTHO05D007575 5.7e-14 82.4 60 71.7
DCAR_029598 Daucus carota HOM05D006386 ORTHO05D007575 7.5e-14 82.0 147 41.5
MELO3C028557.2 Cucumis melo HOM05D006386 ORTHO05D007575 1.7e-13 80.9 67 62.7
Cpa.g.sc53.22 Carica papaya HOM05D006386 ORTHO05D007575 2.7e-11 73.6 131 39.7
Gorai.N008500 Gossypium raimondii HOM05D006386 ORTHO05D007575 9.5e-09 65.1 42 59.5
Gorai.007G248400 Gossypium raimondii HOM05D006386 ORTHO05D007575 2.8e-08 63.5 39 61.5
TWI81G0622 Tripterygium wilfordii HOM05D006386 ORTHO05D007575 6.1e-08 62.4 149 36.2
Mapoly0051s0086 Marchantia polymorpha HOM05D006386 ORTHO05D007575 2.0e-06 57.4 191 23.0


User provided reference genes

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