Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold42G15875 Striga asiatica HOM05D011185 ORTHO05D403762 0.0e+00 1900.9 890 100.0
Duzib150G0476 Durio zibethinus HOM05D000007 ORTHO05D000039 3.2e-21 108.2 259 31.3
Gohir.A10G143700 Gossypium hirsutum HOM05D000007 ORTHO05D000039 8.8e-19 100.1 258 29.8
SGA_v2.0_scaffold42G15880 Striga asiatica HOM05D000040 ORTHO05D003752 5.7e-18 97.4 63 71.4
Gohir.D10G123400 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.7e-17 95.9 259 29.0
COL.COLO4_22623 Corchorus olitorius HOM05D000007 ORTHO05D000039 2.8e-17 95.1 252 30.2
Thecc.09G278300 Theobroma cacao HOM05D000007 ORTHO05D000039 1.1e-16 93.2 256 28.5
SGA_v2.0_scaffold16G07511 Striga asiatica HOM05D000007 ORTHO05D000039 2.0e-15 89.0 271 26.9
TWI81G0699 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 6.6e-14 84.0 261 29.9
Gorai.011G136300 Gossypium raimondii HOM05D000007 ORTHO05D000039 1.5e-13 82.8 249 28.1
TWI34G1066 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.9e-13 82.4 247 28.3
SGA_v2.0_scaffold186G40188 Striga asiatica HOM05D000007 ORTHO05D010595 9.5e-13 80.1 257 27.2
SGA_v2.0_scaffold90G27930 Striga asiatica HOM05D012724 ORTHO05D010595 1.0e-11 76.6 231 32.0
SGA_v2.0_scaffold16G07510 Striga asiatica HOM05D000007 ORTHO05D000039 1.4e-11 76.3 275 25.8
Ca_06153_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000039 1.8e-11 75.9 232 29.7
SGA_v2.0_scaffold2492G54133 Striga asiatica HOM05D000007 ORTHO05D000039 2.3e-11 75.5 224 25.4
Gohir.D10G123300 Gossypium hirsutum HOM05D000007 ORTHO05D000039 3.0e-11 75.1 209 30.1
Medtr2g034700 Medicago truncatula HOM05D000007 ORTHO05D000039 3.0e-11 75.1 236 28.4
Dinv06198 Davidia involucrata HOM05D000007 ORTHO05D000039 6.8e-11 73.9 268 27.2
Thecc.10G169200 Theobroma cacao HOM05D000007 ORTHO05D000039 2.6e-10 72.0 245 28.2
SalBow6G1338 Salvia bowleyana HOM05D012950 ORTHO05D000039 7.5e-10 70.5 274 25.5
SGA_v2.0_scaffold181G39791 Striga asiatica HOM05D011185 ORTHO05D010595 7.5e-10 70.5 211 29.9
EL10Ac2g03744 Beta vulgaris HOM05D000007 ORTHO05D000017 9.8e-10 70.1 276 26.4
Medtr6g461660 Medicago truncatula HOM05D000007 ORTHO05D000039 2.2e-09 68.9 231 28.1
Gorai.011G276100 Gossypium raimondii HOM05D000007 ORTHO05D000039 3.7e-09 68.2 188 28.7
Gorai.011G281100 Gossypium raimondii HOM05D000007 ORTHO05D000039 3.7e-09 68.2 188 28.7
Ca_22994_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000039 4.9e-09 67.8 233 24.5
Ca_31000_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000039 4.9e-09 67.8 233 24.5
Lj1P794T16 Lonicera japonica HOM05D000007 ORTHO05D000039 4.9e-09 67.8 191 28.8
SGA_v2.0_scaffold7G03729 Striga asiatica HOM05D012724 ORTHO05D010595 4.9e-09 67.8 218 32.1
Gohir.D10G241700 Gossypium hirsutum HOM05D000007 ORTHO05D000039 6.3e-09 67.4 188 28.7
PGSC0003DMG400004709 Solanum tuberosum HOM05D000007 ORTHO05D000017 6.3e-09 67.4 265 24.9
ECA233G1576 Erigeron canadensis HOM05D000007 ORTHO05D000039 1.1e-08 66.6 223 27.4
Gohir.D10G240516 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.1e-08 66.6 189 30.2
Gohir.D10G240608 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.1e-08 66.6 190 27.9
Gohir.D10G241008 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.1e-08 66.6 189 30.2
Medtr4g028510 Medicago truncatula HOM05D000007 ORTHO05D000039 1.1e-08 66.6 194 29.9
Gohir.D10G241000 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.8e-08 65.9 188 28.2
Gorai.011G276700 Gossypium raimondii HOM05D000007 ORTHO05D000039 1.8e-08 65.9 188 28.2
Gohir.D10G241100 Gossypium hirsutum HOM05D000007 ORTHO05D000039 2.4e-08 65.5 188 28.7
SalBow6G2994 Salvia bowleyana HOM05D000007 ORTHO05D000017 2.4e-08 65.5 208 28.8
SGA_v2.0_scaffold1G00255 Striga asiatica HOM05D011185 ORTHO05D010595 2.4e-08 65.5 167 31.1
Gorai.011G276900 Gossypium raimondii HOM05D000007 ORTHO05D000039 3.1e-08 65.1 189 28.6
Medtr4g027450 Medicago truncatula HOM05D000007 ORTHO05D000039 3.1e-08 65.1 204 29.4
Medtr4g028660 Medicago truncatula HOM05D000007 ORTHO05D000039 3.1e-08 65.1 204 29.4
SGA_v2.0_scaffold40G15638 Striga asiatica HOM05D011185 ORTHO05D010595 3.1e-08 65.1 221 28.1
Thecc.10G168500 Theobroma cacao HOM05D000007 ORTHO05D000039 3.1e-08 65.1 272 26.1
Thecc.10G168700 Theobroma cacao HOM05D000007 ORTHO05D000039 3.1e-08 65.1 153 28.8
Sopen12g034230 Solanum pennellii HOM05D000007 ORTHO05D000017 4.1e-08 64.7 265 26.0
TPR.G3116 Trifolium pratense HOM05D000007 ORTHO05D000039 5.4e-08 64.3 200 28.5
Medtr6g080680 Medicago truncatula HOM05D000007 ORTHO05D000039 7.0e-08 63.9 206 29.6
Medtr8g464770 Medicago truncatula HOM05D000007 ORTHO05D000039 7.0e-08 63.9 236 26.7
Ca_03354_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000039 9.2e-08 63.5 169 29.6
Ca_22782_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000039 1.2e-07 63.2 190 28.9
SGA_v2.0_scaffold1G00259 Striga asiatica HOM05D011185 ORTHO05D010595 1.2e-07 63.2 270 27.4
SGA_v2.0_scaffold90G27927 Striga asiatica HOM05D012724 ORTHO05D010595 1.6e-07 62.8 276 29.3
TWI60G1487 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.6e-07 62.8 302 27.5
SGA_v2.0_scaffold90G27929 Striga asiatica HOM05D012724 ORTHO05D010595 2.0e-07 62.4 269 28.6
Haze_02864 Corylus avellana HOM05D000007 ORTHO05D000039 2.7e-07 62.0 169 30.8
Gohir.A10G227233 Gossypium hirsutum HOM05D000007 ORTHO05D000039 2.7e-07 62.0 250 28.8
SGA_v2.0_scaffold7G03555 Striga asiatica HOM05D012911 ORTHO05D010595 2.7e-07 62.0 218 28.4
TWI60G0843 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 2.7e-07 62.0 261 26.8
EL10Ac9g20886 Beta vulgaris HOM05D000007 ORTHO05D000039 3.5e-07 61.6 103 34.0
Haze_10070 Corylus avellana HOM05D000007 ORTHO05D000039 3.5e-07 61.6 143 31.5
SGA_v2.0_scaffold16G07514 Striga asiatica HOM05D012911 ORTHO05D010595 3.5e-07 61.6 228 31.1
CAN.G484.34 Capsicum annuum HOM05D000007 ORTHO05D000017 4.5e-07 61.2 204 26.0
MD00G1149800 Malus domestica HOM05D000007 ORTHO05D000039 5.9e-07 60.8 105 35.2
AUR62017742 Chenopodium quinoa HOM05D000007 ORTHO05D000039 7.8e-07 60.5 151 31.8
Gohir.A10G227500 Gossypium hirsutum HOM05D000007 ORTHO05D000039 7.8e-07 60.5 188 27.1
Aa31LG6G12190 Aethionema arabicum HOM05D000171 ORTHO05D000101 1.3e-06 59.7 154 29.9
AUR62032927 Chenopodium quinoa HOM05D000007 ORTHO05D000039 1.3e-06 59.7 153 31.4
Dinv21276 Davidia involucrata HOM05D000007 ORTHO05D000039 1.3e-06 59.7 100 38.0
Gorai.011G281200 Gossypium raimondii HOM05D000007 ORTHO05D000039 1.3e-06 59.7 190 29.5
Medtr3g011120 Medicago truncatula HOM05D000007 ORTHO05D000039 1.3e-06 59.7 239 26.4
SalBow3G2064 Salvia bowleyana HOM05D000412 ORTHO05D000429 1.3e-06 59.7 182 29.7
vmacro23298 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 1.3e-06 59.7 197 28.9
Medtr5g096910 Medicago truncatula HOM05D000007 ORTHO05D000039 1.7e-06 59.3 195 28.7
Peaxi162Scf00469g00073 Petunia axillaris HOM05D000007 ORTHO05D000039 1.7e-06 59.3 102 36.3
TWI79G0220 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.7e-06 59.3 301 24.9
Ca_14677_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000039 2.3e-06 58.9 255 27.1
Dinv34983 Davidia involucrata HOM05D000007 ORTHO05D000039 2.3e-06 58.9 227 28.2
PGSC0003DMG400039904 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.3e-06 58.9 240 23.3
SGA_v2.0_scaffold1G00265 Striga asiatica HOM05D017978 ORTHO05D010595 2.3e-06 58.9 93 38.7
MELO3C030704.2 Cucumis melo HOM05D000007 ORTHO05D000039 2.9e-06 58.5 267 26.2
Peaxi162Scf00038g00024 Petunia axillaris HOM05D000007 ORTHO05D000039 2.9e-06 58.5 102 38.2
Manes.14G121600 Manihot esculenta HOM05D000007 ORTHO05D000039 3.9e-06 58.2 263 25.1
PGR083G0217 Punica granatum HOM05D000007 ORTHO05D000017 3.9e-06 58.2 210 27.1
SGA_v2.0_scaffold84G26553 Striga asiatica HOM05D012911 ORTHO05D010595 3.9e-06 58.2 192 29.2
CARHR125110 Cardamine hirsuta HOM05D000171 ORTHO05D000101 5.0e-06 57.8 134 32.1
Cc04_g11930 Coffea canephora HOM05D000007 ORTHO05D000017 5.0e-06 57.8 165 29.1
Lj3C654T4 Lonicera japonica HOM05D000007 ORTHO05D000017 5.0e-06 57.8 199 28.1
Medtr2g065840 Medicago truncatula HOM05D000007 ORTHO05D000039 5.0e-06 57.8 92 34.8
Peaxi162Scf00646g00004 Petunia axillaris HOM05D000007 ORTHO05D000017 5.0e-06 57.8 139 31.7
SalBow1G3984 Salvia bowleyana HOM05D037136 ORTHO05D005165 5.0e-06 57.8 262 25.2
Lju41C12T8 Lonicera japonica HOM05D000007 ORTHO05D000039 6.6e-06 57.4 105 36.2
Psat0s7655g0040 Pisum sativum HOM05D000007 ORTHO05D000039 6.6e-06 57.4 195 24.6
Psat2g183600 Pisum sativum HOM05D000007 ORTHO05D000039 6.6e-06 57.4 195 24.6
Solyc12g099550.1 Solanum lycopersicum HOM05D000007 ORTHO05D000017 6.6e-06 57.4 202 28.7
Atru.chr4.2390 Acer truncatum HOM05D000007 ORTHO05D000017 8.6e-06 57.0 206 27.7
Haze_13248 Corylus avellana HOM05D000029 ORTHO05D001395 8.6e-06 57.0 164 28.7
SGA_v2.0_scaffold90G27918 Striga asiatica HOM05D012724 ORTHO05D010595 8.6e-06 57.0 210 31.4


User provided reference genes

Program Settings