Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4294G54464 Striga asiatica HOM05D005785 ORTHO05D405094 6.0e-75 284.3 161 100.0
Migut.B00273 Erythranthe guttata HOM05D005785 ORTHO05D007962 3.4e-14 82.4 153 48.4
SalBow6G0785 Salvia bowleyana HOM05D005785 ORTHO05D007962 1.3e-13 80.5 186 43.0
Ciclev10028081m.g Citrus clementina HOM05D005785 ORTHO05D007962 1.4e-10 70.5 172 35.5
Peaxi162Scf00003g01433 Petunia axillaris HOM05D005785 ORTHO05D007962 2.3e-10 69.7 164 34.8
PGSC0003DMG400008269 Solanum tuberosum HOM05D005785 ORTHO05D007962 5.2e-10 68.6 151 38.4
Nitab4.5_0012694g0010 Nicotiana tabacum HOM05D005785 ORTHO05D007962 8.8e-10 67.8 158 31.6
VMungo1127G1831 Vigna mungo HOM05D005785 ORTHO05D007962 1.5e-09 67.0 153 34.0
CAN.G1.48 Capsicum annuum HOM05D005785 ORTHO05D007962 2.0e-09 66.6 130 36.2
COL.COLO4_32470 Corchorus olitorius HOM05D005785 ORTHO05D007962 2.6e-09 66.2 156 34.6
Solyc10g051110.1 Solanum lycopersicum HOM05D005785 ORTHO05D007962 2.6e-09 66.2 151 37.7
Sopen10g022810 Solanum pennellii HOM05D005785 ORTHO05D007962 3.3e-09 65.9 142 38.7
Lsat_1_v5_gn_7_89860 Lactuca sativa HOM05D005785 ORTHO05D007962 7.4e-09 64.7 153 37.9
BcaB06g25943 Brassica carinata HOM05D005785 ORTHO05D007962 1.3e-08 63.9 127 34.6
Nitab4.5_0001361g0190 Nicotiana tabacum HOM05D005785 ORTHO05D007962 1.3e-08 63.9 161 34.2
Atru.chr5.2923 Acer truncatum HOM05D005785 ORTHO05D007962 1.7e-08 63.5 135 39.3
Prupe.8G106300 Prunus persica HOM05D005785 ORTHO05D007962 2.8e-08 62.8 142 33.8
TPR.G28051 Trifolium pratense HOM05D005785 ORTHO05D007962 3.7e-08 62.4 139 34.5
AUR62016697 Chenopodium quinoa HOM05D005785 ORTHO05D007962 4.8e-08 62.0 165 30.3
Phvul.011G048000 Phaseolus vulgaris HOM05D005785 ORTHO05D007962 1.4e-07 60.5 150 33.3
TAR628G1306 Trochodendron aralioides HOM05D005785 ORTHO05D007962 1.4e-07 60.5 153 33.3
Nn5g29471 Nelumbo nucifera HOM05D005785 ORTHO05D007962 1.8e-07 60.1 162 32.7
Thhalv10020309m.g Eutrema salsugineum HOM05D005785 ORTHO05D007962 2.4e-07 59.7 118 36.4
MBI16_g10972_MAGBIO Magnolia biondii HOM05D005785 ORTHO05D007962 2.4e-07 59.7 175 30.3
C05p46540 Brassica napus HOM05D005785 ORTHO05D007962 3.1e-07 59.3 159 29.6
BraA05t21908Z Brassica rapa HOM05D005785 ORTHO05D007962 3.1e-07 59.3 158 32.3
Sabra09G0085100 Salix brachista HOM05D005785 ORTHO05D007962 4.1e-07 58.9 152 34.9
Ah.01g006150 Amaranthus hybridus HOM05D005785 ORTHO05D007962 5.3e-07 58.5 157 33.1
MD10G1083200 Malus domestica HOM05D005785 ORTHO05D007962 7.0e-07 58.2 142 38.0
arahy.Tifrunner.gnm1.ann1.T05FEK Arachis hypogaea HOM05D005785 ORTHO05D007962 1.6e-06 57.0 102 36.3
Glyma.12G046200 Glycine max HOM05D005785 ORTHO05D007962 1.6e-06 57.0 153 30.7
Psat7g185400 Pisum sativum HOM05D005785 ORTHO05D007962 1.6e-06 57.0 138 33.3
Aqoxy6G00992 Aquilegia oxysepala HOM05D005785 ORTHO05D007962 2.6e-06 56.2 141 34.8
DCAR_022090 Daucus carota HOM05D005785 ORTHO05D009166 2.6e-06 56.2 160 35.0
Eucgr.G00478 Eucalyptus grandis HOM05D005785 ORTHO05D007962 2.6e-06 56.2 123 39.0
vmacro02148 Vaccinium macrocarpon HOM05D005785 ORTHO05D007962 2.6e-06 56.2 147 34.0
Potri.009G111323 Populus trichocarpa HOM05D005785 ORTHO05D007962 3.5e-06 55.8 144 34.0
Potri.T124404 Populus trichocarpa HOM05D005785 ORTHO05D007962 3.5e-06 55.8 144 34.0
Manes.15G147600 Manihot esculenta HOM05D005785 ORTHO05D007962 4.5e-06 55.5 141 31.9
Sp3g16990 Schrenkiella parvula HOM05D005785 ORTHO05D007962 5.9e-06 55.1 124 31.5
Cpa.g.sc62.103 Carica papaya HOM05D005785 ORTHO05D007962 7.7e-06 54.7 195 29.7


User provided reference genes

Program Settings