Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold424G51477 Striga asiatica HOM05D007003 ORTHO05D008499 2.2e-199 698.7 345 100.0
CSS0047719 Camellia sinensis var. sinensis HOM05D007003 ORTHO05D008499 1.9e-70 270.4 370 45.1
Oeu007586.1 Olea europaea HOM05D007003 ORTHO05D008499 4.3e-70 269.2 343 47.8
Migut.M01775 Erythranthe guttata HOM05D007003 ORTHO05D008499 9.5e-70 268.1 341 46.3
Actinidia36944 Actinidia chinensis HOM05D001273 ORTHO05D000023 4.0e-68 262.7 329 48.0
Dinv40746 Davidia involucrata HOM05D007003 ORTHO05D008499 4.0e-68 262.7 363 45.2
Cc05_g13800 Coffea canephora HOM05D007003 ORTHO05D008499 5.2e-68 262.3 341 46.6
Nitab4.5_0001913g0010 Nicotiana tabacum HOM05D007003 ORTHO05D008499 5.2e-68 262.3 341 44.9
Phvul.008G266200 Phaseolus vulgaris HOM05D007003 ORTHO05D008499 5.2e-68 262.3 394 41.6
Nitab4.5_0003812g0060 Nicotiana tabacum HOM05D007003 ORTHO05D008499 6.8e-68 261.9 342 44.7
Peaxi162Scf00964g00113 Petunia axillaris HOM05D007003 ORTHO05D008499 8.9e-68 261.5 343 44.6
Solyc07g064480.1 Solanum lycopersicum HOM05D007003 ORTHO05D008499 1.2e-67 261.2 351 44.4
PGSC0003DMG400042605 Solanum tuberosum HOM05D007003 ORTHO05D008499 5.8e-67 258.8 350 44.0
Glyma.14G024800 Glycine max HOM05D007003 ORTHO05D008499 9.8e-67 258.1 383 43.3
Sopen07g032680 Solanum pennellii HOM05D007003 ORTHO05D008499 1.7e-66 257.3 350 44.3
unitig_578.g16000 Utricularia gibba HOM05D007003 ORTHO05D008499 1.7e-66 257.3 335 46.0
TAR627G0793 Trochodendron aralioides HOM05D007003 ORTHO05D008499 2.2e-66 256.9 410 40.7
vmacro11731 Vaccinium macrocarpon HOM05D007003 ORTHO05D008499 2.9e-66 256.5 332 46.7
Potri.001G423900 Populus trichocarpa HOM05D007003 ORTHO05D008499 1.1e-65 254.6 340 47.9
VMungo0647G1301 Vigna mungo HOM05D007003 ORTHO05D008499 1.1e-65 254.6 390 41.5
Gohir.D05G367600 Gossypium hirsutum HOM05D007003 ORTHO05D008499 4.1e-65 252.7 352 44.3
Gohir.A04G018400 Gossypium hirsutum HOM05D007003 ORTHO05D008499 7.0e-65 251.9 352 45.5
Gorai.009G435200 Gossypium raimondii HOM05D007003 ORTHO05D008499 7.0e-65 251.9 352 44.9
PSO675G0160 Papaver somniferum HOM05D007003 ORTHO05D008499 7.0e-65 251.9 346 43.6
Manes.03G124400 Manihot esculenta HOM05D007003 ORTHO05D008499 1.6e-64 250.8 336 45.2
DCAR_022556 Daucus carota HOM05D007003 ORTHO05D008499 2.0e-64 250.4 328 47.3
Atru.chr2.3373 Acer truncatum HOM05D007003 ORTHO05D008499 2.7e-64 250.0 385 42.3
Lj1P870T43 Lonicera japonica HOM05D007003 ORTHO05D008499 2.7e-64 250.0 332 46.1
Rhsim06G0216400 Rhododendron simsii HOM05D000561 ORTHO05D000514 4.6e-64 249.2 322 45.3
Sabra16G0288900 Salix brachista HOM05D007003 ORTHO05D008499 4.6e-64 249.2 338 46.7
CiPaw.12G128900 Carya illinoinensis HOM05D007003 ORTHO05D008499 2.3e-63 246.9 381 41.2
Eucgr.F00779 Eucalyptus grandis HOM05D007003 ORTHO05D008499 2.3e-63 246.9 358 43.6
Lalb_Chr04g0248491 Lupinus albus HOM05D007003 ORTHO05D008499 3.9e-63 246.1 370 42.4
Cpa.g.sc97.17 Carica papaya HOM05D007003 ORTHO05D008499 2.5e-62 243.4 443 39.7
Medtr5g092280 Medicago truncatula HOM05D007003 ORTHO05D008499 2.5e-62 243.4 353 42.2
arahy.Tifrunner.gnm1.ann1.422Z41 Arachis hypogaea HOM05D007003 ORTHO05D008499 3.3e-62 243.0 414 39.4
Sp6g16850 Schrenkiella parvula HOM05D007003 ORTHO05D008499 3.3e-62 243.0 366 41.3
AUR62020466 Chenopodium quinoa HOM05D007003 ORTHO05D008499 5.6e-62 242.3 400 40.0
Lsat_1_v5_gn_5_6061 Lactuca sativa HOM05D007003 ORTHO05D008499 1.2e-61 241.1 327 46.2
Thecc.07G042400 Theobroma cacao HOM05D007003 ORTHO05D008499 2.1e-61 240.4 430 40.0
MD11G1220900 Malus domestica HOM05D001273 ORTHO05D008499 2.8e-61 240.0 432 39.4
Sed0008518 Sechium edule HOM05D007003 ORTHO05D008499 3.6e-61 239.6 345 43.2
GSVIVG01037627001 Vitis vinifera HOM05D007003 ORTHO05D008499 3.6e-61 239.6 359 43.5
Ciclev10008359m.g Citrus clementina HOM05D007003 ORTHO05D008499 6.2e-61 238.8 391 40.2
EL10Ac4g07838 Beta vulgaris HOM05D007003 ORTHO05D008499 3.1e-60 236.5 381 40.7
Ah.04g165820 Amaranthus hybridus HOM05D007003 ORTHO05D008499 4.0e-60 236.1 374 39.8
Cfa020358 Carpinus fangiana HOM05D007003 ORTHO05D008499 4.0e-60 236.1 442 37.6
CsaV3_3G044430 Cucumis sativus L. HOM05D007003 ORTHO05D008499 4.0e-60 236.1 350 43.4
ECA246G4814 Erigeron canadensis HOM05D001273 ORTHO05D000023 4.0e-60 236.1 327 42.2
MELO3C018208.2 Cucumis melo HOM05D007003 ORTHO05D008499 6.8e-60 235.3 353 43.6
LjContig00272g0003747 Lotus japonicus HOM05D007003 ORTHO05D008499 6.8e-60 235.3 376 39.9
TWI39G0907 Tripterygium wilfordii HOM05D007003 ORTHO05D008499 1.2e-59 234.6 328 44.2
Eucgr.F00790 Eucalyptus grandis HOM05D007003 ORTHO05D008499 1.5e-59 234.2 344 44.2
arahy.Tifrunner.gnm1.ann1.6A6QM9 Arachis hypogaea HOM05D007003 ORTHO05D008499 2.6e-59 233.4 423 37.8
FvH4_3g22471 Fragaria vesca HOM05D007003 ORTHO05D008499 2.6e-59 233.4 424 39.4
CANSAT21G1622 Cannabis sativa HOM05D007003 ORTHO05D008499 5.8e-59 232.3 444 36.0
PGR119G0071 Punica granatum HOM05D007003 ORTHO05D008499 5.8e-59 232.3 375 39.7
Nn1g03566 Nelumbo nucifera HOM05D007003 ORTHO05D008499 1.7e-58 230.7 440 37.5
CARHR268220 Cardamine hirsuta HOM05D007003 ORTHO05D008499 2.2e-58 230.3 357 40.6
AUR62015746 Chenopodium quinoa HOM05D007003 ORTHO05D008499 2.2e-58 230.3 395 39.5
Thhalv10013739m.g Eutrema salsugineum HOM05D007003 ORTHO05D008499 2.9e-58 229.9 354 41.5
Haze_09661 Corylus avellana HOM05D007003 ORTHO05D008499 6.4e-58 228.8 450 37.1
RcHm_v2.0_Chr5g0039141 Rosa chinensis HOM05D007003 ORTHO05D008499 6.4e-58 228.8 432 37.7
FAN21G0080 Fragaria x ananassa HOM05D007003 ORTHO05D008499 1.9e-57 227.3 424 38.7
Prupe.4G211300 Prunus persica HOM05D007003 ORTHO05D008499 9.2e-57 224.9 434 37.6
AT5G54880 Arabidopsis thaliana HOM05D007003 ORTHO05D008499 3.5e-56 223.0 362 39.8
TPR.G22251 Trifolium pratense HOM05D007003 ORTHO05D008499 4.6e-56 222.6 352 38.6
BcaB05g22167 Brassica carinata HOM05D007003 ORTHO05D008499 1.3e-55 221.1 334 43.1
AL8G30340 Arabidopsis lyrata HOM05D007003 ORTHO05D008499 1.7e-55 220.7 369 38.5
THA.LOC104817663 Tarenaya hassleriana HOM05D007003 ORTHO05D008499 1.7e-55 220.7 382 40.1
Cfa020360 Carpinus fangiana HOM05D007003 ORTHO05D008499 3.0e-55 219.9 427 37.7
Eucgr.F00955 Eucalyptus grandis HOM05D007003 ORTHO05D008499 3.9e-55 219.5 341 41.6
C02p16580 Brassica napus HOM05D001404 ORTHO05D002309 1.1e-54 218.0 333 42.0
Aa31LG3G10810 Aethionema arabicum HOM05D007003 ORTHO05D008499 1.5e-54 217.6 355 41.7
ATR0752G213 Amborella trichopoda HOM05D007003 ORTHO05D008499 1.5e-54 217.6 434 37.8
BolC2t07756H Brassica oleracea HOM05D001404 ORTHO05D002309 1.9e-54 217.2 333 42.3
A02p10000 Brassica napus HOM05D001404 ORTHO05D008499 2.5e-54 216.9 333 42.0
BraA02t06064Z Brassica rapa HOM05D001404 ORTHO05D002309 2.5e-54 216.9 333 42.0
Aqoxy7G03837 Aquilegia oxysepala HOM05D007003 ORTHO05D008499 1.4e-52 211.1 398 36.4
Duzib213G0769 Durio zibethinus HOM05D007003 ORTHO05D008499 2.4e-52 210.3 485 35.1
Eucgr.L01323 Eucalyptus grandis HOM05D007003 ORTHO05D008499 5.2e-52 209.1 335 42.1
Eucgr.F00879 Eucalyptus grandis HOM05D007003 ORTHO05D008499 1.2e-51 208.0 338 41.7
QL08p011145 Quercus lobata HOM05D007003 ORTHO05D008499 7.6e-51 205.3 451 35.3
QL03p009927 Quercus lobata HOM05D007003 ORTHO05D008499 1.3e-50 204.5 451 35.3
SalBow8G3099 Salvia bowleyana HOM05D007003 ORTHO05D008499 1.3e-50 204.5 193 60.1
HPP92_012320 Vanilla planifolia HOM05D007003 ORTHO05D008499 7.1e-49 198.7 362 37.6
HPP92_012396 Vanilla planifolia HOM05D007003 ORTHO05D008499 7.1e-49 198.7 365 38.4
Psat2g013360 Pisum sativum HOM05D007003 ORTHO05D008499 9.2e-49 198.4 336 37.5
Eucgr.F00922 Eucalyptus grandis HOM05D007003 ORTHO05D008499 3.3e-46 189.9 341 38.1
Actinidia05100 Actinidia chinensis HOM05D007003 ORTHO05D008499 1.8e-44 184.1 153 62.1
Eucgr.F00913 Eucalyptus grandis HOM05D007003 ORTHO05D008499 9.9e-43 178.3 338 39.3
MBI02_g22102_MAGBIO Magnolia biondii HOM05D007003 ORTHO05D008499 1.9e-41 174.1 163 57.1
Ca_26481_v3 Cicer arietinum L. HOM05D007003 ORTHO05D008499 2.4e-41 173.7 206 50.5
Sc16g0006140 Simmondsia chinensis HOM05D007003 ORTHO05D008499 3.2e-41 173.3 365 33.2
Zm00001eb219850 Zea mays HOM05D007003 ORTHO05D008499 2.1e-40 170.6 479 30.1
Eucgr.F00897 Eucalyptus grandis HOM05D007003 ORTHO05D008499 6.0e-40 169.1 298 38.6
Os03g0568600 Oryza sativa ssp. japonica HOM05D007003 ORTHO05D008499 6.0e-40 169.1 482 30.1
MBI02_g19288_MAGBIO Magnolia biondii HOM05D007003 ORTHO05D008499 1.9e-38 164.1 163 56.4
Eucgr.F00928 Eucalyptus grandis HOM05D007003 ORTHO05D008499 3.3e-38 163.3 304 37.2
SEGI_36701 Sequoiadendron giganteum HOM05D007003 ORTHO05D008499 9.6e-38 161.8 347 37.2
CDE11G0477 Ceratophyllum demersum HOM05D007003 ORTHO05D008499 1.8e-36 157.5 281 35.6
Carub.0008s1518 Capsella rubella HOM05D007003 ORTHO05D008499 1.5e-35 154.5 215 44.7
Zm00001eb026290 Zea mays HOM05D007003 ORTHO05D008499 1.4e-33 147.9 152 50.7
BcaC03g14277 Brassica carinata HOM05D007003 ORTHO05D008499 2.1e-32 144.1 152 52.0
TPR.G17434 Trifolium pratense HOM05D007003 ORTHO05D008499 2.3e-31 140.6 192 44.3
AagrBONN_evm.TU.Sc2ySwM_362.2079 Anthoceros agrestis HOM05D007003 ORTHO05D008499 3.0e-31 140.2 325 34.2
Mapoly0032s0131 Marchantia polymorpha HOM05D007003 ORTHO05D008499 1.6e-29 134.4 348 31.9
Pp3c4_4830 Physcomitrium patens HOM05D007003 ORTHO05D008499 8.1e-29 132.1 329 31.3
Ca_03331_v3 Cicer arietinum L. HOM05D007003 ORTHO05D008499 6.0e-24 115.9 149 44.3
TPR.G22255 Trifolium pratense HOM05D005190 ORTHO05D006183 1.6e-21 107.8 262 30.9
SMO339G0013 Selaginella moellendorffii HOM05D007003 ORTHO05D008499 6.2e-21 105.9 328 27.1
CAN.G337.122 Capsicum annuum HOM05D007003 ORTHO05D008499 1.1e-20 105.1 94 63.8
SGA_v2.0_scaffold353G49700 Striga asiatica HOM05D007003 ORTHO05D008499 7.6e-19 99.0 89 61.8
MD03G1204100 Malus domestica HOM05D007003 ORTHO05D008499 1.1e-17 95.1 107 48.6
MBI02_g22101_MAGBIO Magnolia biondii HOM05D007003 ORTHO05D002463 4.2e-17 93.2 69 59.4
CAN.G337.121 Capsicum annuum HOM05D007003 ORTHO05D008499 1.3e-15 88.2 95 44.2
TPR.G1231 Trifolium pratense HOM05D007003 ORTHO05D008499 1.9e-14 84.3 83 45.8
TPR.G1180 Trifolium pratense HOM05D007003 ORTHO05D008499 5.7e-14 82.8 80 47.5
SGA_v2.0_scaffold338G49205 Striga asiatica HOM05D007003 ORTHO05D008499 7.4e-14 82.4 72 63.9
Zm00001eb352490 Zea mays HOM05D006576 ORTHO05D008499 7.4e-14 82.4 89 44.9
ClCG05G014280 Citrullus lanatus HOM05D007003 ORTHO05D008499 3.1e-12 77.0 56 60.7
Actinidia05099 Actinidia chinensis HOM05D001273 ORTHO05D000023 5.0e-10 69.7 61 60.7
Mapoly0023s0152 Marchantia polymorpha HOM05D007273 ORTHO05D009230 1.5e-06 58.2 328 24.1


User provided reference genes

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