Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold423G51459 Striga asiatica HOM05D005725 ORTHO05D007531 1.8e-142 509.2 248 100.0
MSTRG.16376 Avicennia marina HOM05D005725 ORTHO05D007531 2.8e-63 246.1 212 59.4
Migut.M02028 Erythranthe guttata HOM05D005725 ORTHO05D007531 7.6e-61 238.0 207 59.9
SalBow8G4963 Salvia bowleyana HOM05D005725 ORTHO05D007531 1.9e-43 180.3 172 52.9
Solyc01g021640.3 Solanum lycopersicum HOM05D005725 ORTHO05D007531 2.6e-37 159.8 207 43.5
Sopen01g016500 Solanum pennellii HOM05D005725 ORTHO05D007531 3.4e-37 159.5 207 43.5
Peaxi162Scf00378g00520 Petunia axillaris HOM05D005725 ORTHO05D007531 1.7e-36 157.1 192 43.2
Dinv17876 Davidia involucrata HOM05D005725 ORTHO05D007531 2.2e-36 156.8 216 40.7
GSVIVG01010083001 Vitis vinifera HOM05D005725 ORTHO05D007531 1.4e-30 137.5 209 41.1
CANSAT54G1139 Cannabis sativa HOM05D005725 ORTHO05D007531 2.6e-29 133.3 201 39.8
Glyma.15G155900 Glycine max HOM05D005725 ORTHO05D007531 3.4e-29 132.9 209 41.6
Nn7g38404 Nelumbo nucifera HOM05D005725 ORTHO05D007531 7.6e-29 131.7 214 40.2
TWI38G1126 Tripterygium wilfordii HOM05D005725 ORTHO05D007531 2.2e-28 130.2 210 40.5
Prupe.4G119800 Prunus persica HOM05D005725 ORTHO05D007531 3.8e-28 129.4 206 37.4
VMungo1309G0521 Vigna mungo HOM05D005725 ORTHO05D007531 1.1e-27 127.9 208 39.4
PSO541G5061 Papaver somniferum HOM05D005725 ORTHO05D007531 1.4e-27 127.5 199 38.2
Ciclev10015389m.g Citrus clementina HOM05D005725 ORTHO05D007531 2.5e-27 126.7 190 39.5
MD05G1243800 Malus domestica HOM05D005725 ORTHO05D007531 5.5e-27 125.6 208 36.1
RcHm_v2.0_Chr5g0021701 Rosa chinensis HOM05D005725 ORTHO05D007531 5.5e-27 125.6 200 38.0
Manes.03G071900 Manihot esculenta HOM05D005725 ORTHO05D007531 7.1e-27 125.2 210 39.5
Aqoxy1G01377 Aquilegia oxysepala HOM05D005725 ORTHO05D007531 1.2e-26 124.4 210 40.5
Lsat_1_v5_gn_8_107401 Lactuca sativa HOM05D005725 ORTHO05D007531 1.6e-26 124.0 195 36.4
AUR62003571 Chenopodium quinoa HOM05D005725 ORTHO05D007531 2.1e-26 123.6 207 38.2
Medtr2g437810 Medicago truncatula HOM05D005725 ORTHO05D007531 2.1e-26 123.6 204 40.2
FvH4_3g13240 Fragaria vesca HOM05D005725 ORTHO05D007531 2.7e-26 123.2 191 38.7
HanXRQChr09g0257851 Helianthus annuus HOM05D005725 ORTHO05D007531 2.7e-26 123.2 201 37.8
Potri.001G075300 Populus trichocarpa HOM05D005725 ORTHO05D007531 3.5e-26 122.9 192 37.5
CiPaw.10G107600 Carya illinoinensis HOM05D005725 ORTHO05D007531 4.6e-26 122.5 227 35.2
Lj6g0004794 Lotus japonicus HOM05D005725 ORTHO05D007531 4.6e-26 122.5 214 39.3
Haze_05199 Corylus avellana HOM05D005725 ORTHO05D007531 7.9e-26 121.7 272 32.4
FAN11G2553 Fragaria x ananassa HOM05D005725 ORTHO05D007531 7.9e-26 121.7 191 38.2
FAN21G2681 Fragaria x ananassa HOM05D005725 ORTHO05D007531 2.3e-25 120.2 191 38.2
Glyma.09G048600 Glycine max HOM05D005725 ORTHO05D007531 3.0e-25 119.8 210 40.0
unitig_746.g26585 Utricularia gibba HOM05D005725 ORTHO05D007531 3.0e-25 119.8 129 48.1
ECA232G4493 Erigeron canadensis HOM05D005725 ORTHO05D007531 3.9e-25 119.4 206 37.4
Phvul.009G244300 Phaseolus vulgaris HOM05D005725 ORTHO05D007531 8.7e-25 118.2 193 38.9
MELO3C007000.2 Cucumis melo HOM05D005725 ORTHO05D007531 1.1e-24 117.9 209 35.4
FAN25G0714 Fragaria x ananassa HOM05D005725 ORTHO05D007531 1.5e-24 117.5 189 38.1
AUR62017886 Chenopodium quinoa HOM05D005725 ORTHO05D007531 1.9e-24 117.1 207 36.7
TAR626G0843 Trochodendron aralioides HOM05D005725 ORTHO05D007531 2.5e-24 116.7 130 47.7
Psat1g151080 Pisum sativum HOM05D005725 ORTHO05D007531 4.3e-24 115.9 194 38.7
Cc09_g04730 Coffea canephora HOM05D005725 ORTHO05D007531 7.4e-24 115.2 207 34.8
TPR.G30931 Trifolium pratense HOM05D005725 ORTHO05D007531 7.4e-24 115.2 200 40.5
Lalb_Chr18g0051971 Lupinus albus HOM05D005725 ORTHO05D007531 2.2e-23 113.6 208 38.0
Duzib052G0524 Durio zibethinus HOM05D005725 ORTHO05D007531 2.8e-23 113.2 210 37.1
FAN16G0048 Fragaria x ananassa HOM05D005725 ORTHO05D007531 1.1e-22 111.3 190 36.3
Eucgr.D00006 Eucalyptus grandis HOM05D005725 ORTHO05D007531 1.4e-22 110.9 208 36.5
Ah.03g147910 Amaranthus hybridus HOM05D005725 ORTHO05D007531 2.4e-22 110.2 213 34.3
COL.COLO4_25036 Corchorus olitorius HOM05D005725 ORTHO05D007531 2.4e-22 110.2 194 38.1
DCAR_001262 Daucus carota HOM05D005725 ORTHO05D007531 3.1e-22 109.8 197 34.5
Zm00001eb298410 Zea mays HOM05D005725 ORTHO05D007531 4.1e-22 109.4 131 45.8
RcHm_v2.0_Chr5g0021601 Rosa chinensis HOM05D005725 ORTHO05D007531 5.3e-22 109.0 211 34.1
Os07g0108000 Oryza sativa ssp. japonica HOM05D005725 ORTHO05D007531 1.5e-21 107.5 206 32.0
Thecc.02G002000 Theobroma cacao HOM05D005725 ORTHO05D007531 2.6e-21 106.7 208 36.1
Ca_02400_v3 Cicer arietinum L. HOM05D005725 ORTHO05D007531 5.9e-21 105.5 137 46.0
QL11p011022 Quercus lobata HOM05D005725 ORTHO05D007531 5.9e-21 105.5 256 31.2
Atru.chr2.2825 Acer truncatum HOM05D005725 ORTHO05D007531 1.3e-20 104.4 141 44.0
Sabra01G0053700 Salix brachista HOM05D005725 ORTHO05D007531 3.8e-20 102.8 141 40.4
arahy.Tifrunner.gnm1.ann1.GBFD5K Arachis hypogaea HOM05D005725 ORTHO05D007531 5.0e-20 102.4 198 33.3
arahy.Tifrunner.gnm1.ann1.G9C5AI Arachis hypogaea HOM05D005725 ORTHO05D007531 8.5e-20 101.7 198 33.8
Sed0022851 Sechium edule HOM05D005725 ORTHO05D007531 1.1e-19 101.3 190 34.7
AT5G17370 Arabidopsis thaliana HOM05D005725 ORTHO05D007531 1.4e-19 100.9 145 40.0
Duzib132G0485 Durio zibethinus HOM05D005725 ORTHO05D007531 1.4e-19 100.9 218 34.4
arahy.Tifrunner.gnm1.ann1.2M6VYA Arachis hypogaea HOM05D005725 ORTHO05D007531 1.9e-19 100.5 202 32.7
Cfa001153 Carpinus fangiana HOM05D005725 ORTHO05D007531 2.5e-19 100.1 149 38.3
Gohir.A11G047200 Gossypium hirsutum HOM05D005725 ORTHO05D007531 7.2e-19 98.6 214 34.1
PGR004G2791 Punica granatum HOM05D005725 ORTHO05D007531 7.2e-19 98.6 210 37.1
CDE06G0984 Ceratophyllum demersum HOM05D005725 ORTHO05D007531 3.6e-18 96.3 166 36.7
Gorai.007G055200 Gossypium raimondii HOM05D005725 ORTHO05D007531 3.6e-18 96.3 221 35.7
AL6G28440 Arabidopsis lyrata HOM05D005725 ORTHO05D007531 6.1e-18 95.5 145 38.6
Carub.0006s1558 Capsella rubella HOM05D005725 ORTHO05D007531 6.1e-18 95.5 145 38.6
CARHR195840 Cardamine hirsuta HOM05D005725 ORTHO05D007531 7.9e-18 95.1 145 39.3
Gohir.D11G050800 Gossypium hirsutum HOM05D005725 ORTHO05D007531 3.9e-17 92.8 221 35.3
Sp6g26850 Schrenkiella parvula HOM05D005725 ORTHO05D007531 3.9e-17 92.8 147 38.1
Aa31LG11G12260 Aethionema arabicum HOM05D005725 ORTHO05D007531 1.1e-14 84.7 146 35.6
A02p04160 Brassica napus HOM05D005725 ORTHO05D007531 2.4e-14 83.6 162 34.0
BcaC03g18554 Brassica carinata HOM05D005725 ORTHO05D007531 4.1e-14 82.8 146 34.9
BraA02t05379Z Brassica rapa HOM05D005725 ORTHO05D007531 4.1e-14 82.8 162 34.6
ATR0794G001 Amborella trichopoda HOM05D005725 ORTHO05D007531 9.1e-14 81.6 217 31.8
BolC2t06810H Brassica oleracea HOM05D005725 ORTHO05D007531 9.1e-14 81.6 147 36.1
C02p09010 Brassica napus HOM05D005725 ORTHO05D007531 1.2e-13 81.3 150 35.3
Hund26771 Selenicereus undatus HOM05D005725 ORTHO05D007531 1.2e-13 81.3 157 33.8
ClCG01G025890 Citrullus lanatus HOM05D005725 ORTHO05D007531 2.0e-13 80.5 174 32.2
BcaB05g23263 Brassica carinata HOM05D005725 ORTHO05D007531 2.6e-13 80.1 143 35.0
HPP92_000831 Vanilla planifolia HOM05D005725 ORTHO05D007531 2.6e-13 80.1 165 32.7
Thhalv10015915m.g Eutrema salsugineum HOM05D005725 ORTHO05D007531 5.9e-13 79.0 142 34.5
Sc05g0005240 Simmondsia chinensis HOM05D005725 ORTHO05D007531 5.9e-13 79.0 172 30.2
CSS0030006 Camellia sinensis var. sinensis HOM05D005725 ORTHO05D007531 1.3e-12 77.8 97 43.3
BcaC05g29074 Brassica carinata HOM05D005725 ORTHO05D007531 2.2e-12 77.0 132 34.8
vmacro03566 Vaccinium macrocarpon HOM05D005725 ORTHO05D007531 2.2e-12 77.0 180 31.7
Oeu013488.1 Olea europaea HOM05D005725 ORTHO05D007531 2.5e-11 73.6 111 37.8
BolC5t33962H Brassica oleracea HOM05D005725 ORTHO05D007531 3.2e-11 73.2 117 36.8
Atru.chr10.248 Acer truncatum HOM05D005725 ORTHO05D007531 7.9e-10 68.6 207 29.0
C09p34670 Brassica napus HOM05D005725 ORTHO05D007531 5.1e-09 65.9 137 31.4
BolC9t56313H Brassica oleracea HOM05D005725 ORTHO05D007531 5.1e-09 65.9 137 31.4
DCAR_004356 Daucus carota HOM05D005725 ORTHO05D007531 2.6e-08 63.5 82 35.4
Dinv31193 Davidia involucrata HOM05D005725 ORTHO05D020553 3.3e-08 63.2 123 38.2
Atru.chr1.2967 Acer truncatum HOM05D005725 ORTHO05D007531 7.4e-08 62.0 87 43.7
BcaC04g22388 Brassica carinata HOM05D005725 ORTHO05D007531 7.4e-08 62.0 114 35.1
C09p19870 Brassica napus HOM05D005725 ORTHO05D007531 7.4e-08 62.0 114 35.1
BolC9t54892H Brassica oleracea HOM05D005725 ORTHO05D007531 7.4e-08 62.0 114 35.1
Nitab4.5_0001484g0010 Nicotiana tabacum HOM05D005725 ORTHO05D007531 2.4e-06 57.0 103 34.0
DCAR_004355 Daucus carota HOM05D005725 ORTHO05D007531 9.1e-06 55.1 114 34.2


User provided reference genes

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