Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4221G54449 Striga asiatica HOM05D000176 ORTHO05D000106 4.4e-92 341.3 172 100.0
MSTRG.10797 Avicennia marina HOM05D000176 ORTHO05D000106 3.9e-32 142.1 187 49.7
Oeu063771.2 Olea europaea HOM05D000176 ORTHO05D000106 1.1e-26 124.0 156 46.8
Dinv18200 Davidia involucrata HOM05D000176 ORTHO05D000106 1.9e-26 123.2 126 55.6
Nitab4.5_0000476g0120 Nicotiana tabacum HOM05D000176 ORTHO05D000106 5.5e-26 121.7 143 48.3
Nitab4.5_0003663g0020 Nicotiana tabacum HOM05D000176 ORTHO05D000106 9.3e-26 120.9 143 49.7
Sopen05g034420 Solanum pennellii HOM05D000176 ORTHO05D000106 2.1e-25 119.8 126 50.8
PGSC0003DMG400023346 Solanum tuberosum HOM05D000176 ORTHO05D000106 2.7e-25 119.4 126 52.4
Solyc05g056010.3 Solanum lycopersicum HOM05D000176 ORTHO05D000106 7.9e-25 117.9 126 50.0
Peaxi162Scf00020g02126 Petunia axillaris HOM05D000176 ORTHO05D000106 3.3e-23 112.5 126 52.4
Peaxi162Scf00384g01218 Petunia axillaris HOM05D000176 ORTHO05D000106 3.3e-23 112.5 126 52.4
Actinidia11188 Actinidia chinensis HOM05D000176 ORTHO05D000106 5.7e-23 111.7 125 52.0
CSS0002500 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 5.7e-23 111.7 127 48.8
CSS0014815 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 5.7e-23 111.7 127 48.8
Lj3C925T6 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-22 109.8 155 43.9
Migut.K00126 Erythranthe guttata HOM05D000176 ORTHO05D000106 2.8e-22 109.4 169 47.9
Actinidia28384 Actinidia chinensis HOM05D000176 ORTHO05D000106 3.7e-22 109.0 123 52.0
Cc03_g14530 Coffea canephora HOM05D000176 ORTHO05D000106 4.8e-22 108.6 181 43.6
vmacro12437 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 4.1e-21 105.5 97 59.8
Rhsim06G0121800 Rhododendron simsii HOM05D000176 ORTHO05D000106 6.9e-21 104.8 104 56.7
DCAR_021305 Daucus carota HOM05D000176 ORTHO05D000106 2.2e-19 99.8 78 64.1
CsaV3_6G015670 Cucumis sativus L. HOM05D000176 ORTHO05D000106 2.9e-19 99.4 124 48.4
CSS0028049 Camellia sinensis var. sinensis HOM05D001875 ORTHO05D000106 3.8e-19 99.0 86 58.1
CSS0045164 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.8e-19 99.0 86 58.1
Lj6g0005713 Lotus japonicus HOM05D000176 ORTHO05D000106 3.8e-19 99.0 160 43.1
MELO3C019704.2 Cucumis melo HOM05D000176 ORTHO05D000106 5.0e-19 98.6 111 52.3
GSVIVG01006780001 Vitis vinifera HOM05D000176 ORTHO05D000106 8.5e-19 97.8 78 65.4
Cfa021595 Carpinus fangiana HOM05D000176 ORTHO05D000106 1.1e-18 97.4 80 61.2
GSVIVG01000818001 Vitis vinifera HOM05D000176 ORTHO05D000106 3.2e-18 95.9 78 65.4
arahy.Tifrunner.gnm1.ann1.ZG7XLL Arachis hypogaea HOM05D000176 ORTHO05D000106 4.2e-18 95.5 79 60.8
Haze_13472 Corylus avellana HOM05D000176 ORTHO05D000106 5.5e-18 95.1 78 60.3
Lalb_Chr20g0114151 Lupinus albus HOM05D000176 ORTHO05D000106 5.5e-18 95.1 126 44.4
arahy.Tifrunner.gnm1.ann1.B0WW5W Arachis hypogaea HOM05D000176 ORTHO05D000106 1.2e-17 94.0 77 61.0
PGR042G1331 Punica granatum HOM05D000176 ORTHO05D000106 1.2e-17 94.0 136 44.1
Sed0012746 Sechium edule HOM05D000176 ORTHO05D000106 2.1e-17 93.2 130 45.4
QL08p043592 Quercus lobata HOM05D000176 ORTHO05D000106 2.7e-17 92.8 78 59.0
VMungo0540G2186 Vigna mungo HOM05D000176 ORTHO05D000106 2.7e-17 92.8 128 45.3
Sc12g0003730 Simmondsia chinensis HOM05D000176 ORTHO05D000106 7.9e-17 91.3 146 41.8
TPR.G1842 Trifolium pratense HOM05D000176 ORTHO05D000106 1.0e-16 90.9 128 46.1
FvH4_6g37771 Fragaria vesca HOM05D000176 ORTHO05D000106 1.4e-16 90.5 86 53.5
Lsat_1_v5_gn_7_67341 Lactuca sativa HOM05D000176 ORTHO05D000106 1.4e-16 90.5 133 47.4
Ah.16g107440 Amaranthus hybridus HOM05D000176 ORTHO05D000106 1.8e-16 90.1 148 37.8
Lalb_Chr15g0080531 Lupinus albus HOM05D000176 ORTHO05D000106 1.8e-16 90.1 148 39.9
RcHm_v2.0_Chr2g0150841 Rosa chinensis HOM05D000176 ORTHO05D000106 2.3e-16 89.7 86 53.5
EL10As19g24186 Beta vulgaris HOM05D000176 ORTHO05D000106 3.9e-16 89.0 112 42.9
Ca_14624_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 3.9e-16 89.0 165 38.2
Atru.chr6.3350 Acer truncatum HOM05D000176 ORTHO05D000106 5.7e-15 85.1 78 52.6
Psat5g183880 Pisum sativum HOM05D000176 ORTHO05D000106 7.4e-15 84.7 182 35.7
Dinv05007 Davidia involucrata HOM05D000176 ORTHO05D000106 9.7e-15 84.3 63 63.5
Prupe.3G169000 Prunus persica HOM05D000176 ORTHO05D000106 9.7e-15 84.3 78 52.6
ECA240G4387 Erigeron canadensis HOM05D000176 ORTHO05D000106 1.7e-14 83.6 147 38.8
TWI36G1460 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 1.4e-13 80.5 78 51.3
Ciclev10014335m.g Citrus clementina HOM05D000176 ORTHO05D000106 2.4e-13 79.7 78 50.0
MD09G1156100 Malus domestica HOM05D000176 ORTHO05D000106 3.1e-13 79.3 160 36.9
Hund07743 Selenicereus undatus HOM05D000176 ORTHO05D000106 3.1e-13 79.3 125 43.2
Sabra02G0169600 Salix brachista HOM05D000176 ORTHO05D000106 5.3e-13 78.6 111 41.4
Eucgr.A01958 Eucalyptus grandis HOM05D000176 ORTHO05D000106 2.0e-12 76.6 136 37.5
MD17G1142200 Malus domestica HOM05D000176 ORTHO05D000106 7.7e-12 74.7 185 33.5
Duzib138G0102 Durio zibethinus HOM05D000176 ORTHO05D000106 1.3e-11 73.9 76 48.7
Duzib211G0089 Durio zibethinus HOM05D000176 ORTHO05D000106 6.5e-11 71.6 76 47.4
Gorai.001G193000 Gossypium raimondii HOM05D000176 ORTHO05D000106 8.5e-11 71.2 76 47.4
AUR62022514 Chenopodium quinoa HOM05D000176 ORTHO05D000106 1.4e-10 70.5 156 30.8
AUR62038389 Chenopodium quinoa HOM05D000176 ORTHO05D000106 1.4e-10 70.5 112 37.5
COL.COLO4_33030 Corchorus olitorius HOM05D000176 ORTHO05D000106 7.2e-10 68.2 76 47.4
AUR62038386 Chenopodium quinoa HOM05D000176 ORTHO05D000106 1.2e-09 67.4 112 36.6
Aa31sc575G20 Aethionema arabicum HOM05D000176 ORTHO05D000106 1.8e-08 63.5 137 31.4
AT2G04865 Arabidopsis thaliana HOM05D000176 ORTHO05D000106 8.8e-08 61.2 124 32.3
Atru.chr6.3553_Atru.chr6.3554 Acer truncatum HOM05D000176 ORTHO05D000106 1.1e-07 60.8 162 32.7
AL3G42490 Arabidopsis lyrata HOM05D000176 ORTHO05D000106 1.5e-07 60.5 124 31.5
CARHR102890 Cardamine hirsuta HOM05D000176 ORTHO05D000106 4.4e-07 58.9 125 31.2
Thhalv10002429m.g Eutrema salsugineum HOM05D000176 ORTHO05D000106 5.7e-07 58.5 125 33.6
A03p44500 Brassica napus HOM05D000176 ORTHO05D000106 6.3e-06 55.1 155 31.6
C03p55310 Brassica napus HOM05D000176 ORTHO05D000106 6.3e-06 55.1 155 31.6
BolC3t17803H Brassica oleracea HOM05D000176 ORTHO05D000106 6.3e-06 55.1 155 31.6
BraA03t13583Z Brassica rapa HOM05D000176 ORTHO05D000106 6.3e-06 55.1 155 31.6


User provided reference genes

Program Settings