Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold41G15869 Striga asiatica HOM05D011572 ORTHO05D006517 4.2e-189 664.5 318 100.0
SGA_v2.0_scaffold365G50016 Striga asiatica HOM05D011572 ORTHO05D006517 4.8e-185 651.0 318 97.8
SGA_v2.0_scaffold206G41802 Striga asiatica HOM05D011572 ORTHO05D006517 8.2e-185 650.2 318 98.1
SGA_v2.0_scaffold22G09842 Striga asiatica HOM05D011572 ORTHO05D006517 8.2e-169 597.0 320 89.4
SGA_v2.0_scaffold45G17094 Striga asiatica HOM05D011572 ORTHO05D006517 3.0e-147 525.4 311 81.7
SGA_v2.0_scaffold12G06313 Striga asiatica HOM05D011572 ORTHO05D006517 6.2e-132 474.6 308 76.9
SGA_v2.0_scaffold9G04869 Striga asiatica HOM05D011572 ORTHO05D006517 9.7e-45 184.9 246 43.5
SGA_v2.0_scaffold502G52512 Striga asiatica HOM05D011572 ORTHO05D006517 6.8e-38 162.2 86 90.7
SGA_v2.0_scaffold229G43297 Striga asiatica HOM05D001343 ORTHO05D002008 1.6e-26 124.4 183 38.3
Thecc.02G036800 Theobroma cacao HOM05D008181 ORTHO05D010459 2.6e-21 107.1 301 27.2
SalBow7G0014 Salvia bowleyana HOM05D008082 ORTHO05D006517 4.9e-20 102.8 265 29.8
SGA_v2.0_scaffold187G40267 Striga asiatica HOM05D011572 ORTHO05D006517 6.4e-20 102.4 118 43.2
SalBow8G1323 Salvia bowleyana HOM05D008082 ORTHO05D006517 7.0e-19 99.0 264 28.0
SalBow2G3428 Salvia bowleyana HOM05D008082 ORTHO05D006517 9.2e-19 98.6 264 28.0
SalBow2G3580 Salvia bowleyana HOM05D008082 ORTHO05D006517 9.2e-19 98.6 264 28.0
SalBow8G0214 Salvia bowleyana HOM05D031689 ORTHO05D006517 9.2e-19 98.6 329 28.3
Thecc.10G054600 Theobroma cacao HOM05D008181 ORTHO05D010459 4.6e-18 96.3 299 27.1
SalBow1G3545 Salvia bowleyana HOM05D008082 ORTHO05D006517 3.9e-17 93.2 264 28.4
SalBow1G5862 Salvia bowleyana HOM05D008082 ORTHO05D006517 1.1e-16 91.7 264 27.7
SalBow4G1541 Salvia bowleyana HOM05D008082 ORTHO05D006517 5.6e-16 89.4 264 28.8
SalBow4G1611 Salvia bowleyana HOM05D009699 ORTHO05D006517 1.2e-15 88.2 253 25.7
Thecc.03G161900 Theobroma cacao HOM05D008181 ORTHO05D010459 1.2e-15 88.2 278 25.2
SalBow8G4995 Salvia bowleyana HOM05D008082 ORTHO05D006517 2.8e-15 87.0 264 29.2
Thecc.05G196700 Theobroma cacao HOM05D008181 ORTHO05D010459 1.1e-14 85.1 256 26.6
SalBow2G0951 Salvia bowleyana HOM05D015320 ORTHO05D006517 3.1e-14 83.6 213 28.2
SalBow1G5422 Salvia bowleyana HOM05D010599 ORTHO05D006517 2.0e-13 80.9 232 26.3
SalBow3G1743 Salvia bowleyana HOM05D000011 ORTHO05D006517 2.6e-13 80.5 210 28.1
Thecc.02G255800 Theobroma cacao HOM05D008181 ORTHO05D010459 5.8e-13 79.3 175 28.0
SalBow3G1893 Salvia bowleyana HOM05D008082 ORTHO05D006517 9.8e-13 78.6 226 26.5
SalBow8G1146 Salvia bowleyana HOM05D000011 ORTHO05D000018 1.7e-12 77.8 126 34.9
SalBow3G2968 Salvia bowleyana HOM05D031689 ORTHO05D006517 3.7e-12 76.6 140 35.0
Thecc.05G178300 Theobroma cacao HOM05D008181 ORTHO05D010459 3.7e-12 76.6 207 25.1
Thecc.05G225100 Theobroma cacao HOM05D008181 ORTHO05D010459 4.9e-12 76.3 181 24.9
SalBow1G7517 Salvia bowleyana HOM05D010599 ORTHO05D006517 8.3e-12 75.5 140 31.4
Thecc.07G103000 Theobroma cacao HOM05D008181 ORTHO05D021025 1.1e-11 75.1 156 29.5
SalBow1G6861 Salvia bowleyana HOM05D010599 ORTHO05D006517 1.4e-11 74.7 282 24.1
SalBow2G1190 Salvia bowleyana HOM05D010599 ORTHO05D006517 1.4e-11 74.7 282 24.1
SGA_v2.0_scaffold6G03233 Striga asiatica HOM05D001567 ORTHO05D001409 1.4e-11 74.7 34 85.3
SalBow6G2617 Salvia bowleyana HOM05D008082 ORTHO05D006517 1.9e-11 74.3 207 29.0
Thecc.01G399000 Theobroma cacao HOM05D008181 ORTHO05D010459 3.2e-11 73.6 215 26.0
Thecc.09G272400 Theobroma cacao HOM05D008181 ORTHO05D010459 5.4e-11 72.8 128 31.2
SalBow5G1923 Salvia bowleyana HOM05D008082 ORTHO05D006517 1.2e-10 71.6 229 25.3
SalBow6G3176 Salvia bowleyana HOM05D010599 ORTHO05D006517 2.7e-10 70.5 281 25.6
Thecc.02G178200 Theobroma cacao HOM05D008181 ORTHO05D021025 4.6e-10 69.7 87 35.6
Thecc.06G125800 Theobroma cacao HOM05D008181 ORTHO05D010459 6.0e-10 69.3 154 31.2
SalBow1G7044 Salvia bowleyana HOM05D009699 ORTHO05D006517 7.8e-10 68.9 135 31.1
SalBow3G1903 Salvia bowleyana HOM05D008082 ORTHO05D006517 7.8e-10 68.9 146 30.8
PGSC0003DMG400000873 Solanum tuberosum HOM05D000679 ORTHO05D000137 7.8e-10 68.9 241 23.2
Thecc.04G033000 Theobroma cacao HOM05D008181 ORTHO05D010459 1.0e-09 68.6 156 28.2
Thecc.05G143600 Theobroma cacao HOM05D008181 ORTHO05D021025 1.3e-09 68.2 108 32.4
Thecc.06G088800 Theobroma cacao HOM05D008181 ORTHO05D010459 1.3e-09 68.2 228 25.0
Thecc.09G213300 Theobroma cacao HOM05D008181 ORTHO05D010459 1.3e-09 68.2 234 22.2
Thecc.02G200300 Theobroma cacao HOM05D008181 ORTHO05D010459 1.7e-09 67.8 227 24.7
SalBow2G1060 Salvia bowleyana HOM05D009699 ORTHO05D006517 3.0e-09 67.0 115 32.2
SalBow3G2031 Salvia bowleyana HOM05D011572 ORTHO05D006517 3.9e-09 66.6 153 26.8
SalBow1G5610 Salvia bowleyana HOM05D010599 ORTHO05D006517 6.6e-09 65.9 129 31.8
SalBow4G1733 Salvia bowleyana HOM05D008082 ORTHO05D006517 6.6e-09 65.9 241 26.1
SalBow6G1465 Salvia bowleyana HOM05D009699 ORTHO05D006517 6.6e-09 65.9 208 25.5
SalBow6G6558 Salvia bowleyana HOM05D010599 ORTHO05D006517 1.9e-08 64.3 132 31.8
Thecc.10G115900 Theobroma cacao HOM05D008181 ORTHO05D010459 1.9e-08 64.3 128 27.3
SalBow8G1284 Salvia bowleyana HOM05D008082 ORTHO05D006517 2.5e-08 63.9 241 24.9
SGA_v2.0_scaffold74G24697 Striga asiatica HOM05D011572 ORTHO05D006517 2.5e-08 63.9 64 51.6
CANSAT64G2290 Cannabis sativa HOM05D008058 ORTHO05D010564 3.3e-08 63.5 226 26.5
SGA_v2.0_scaffold844G53665 Striga asiatica HOM05D213144 ORTHO05D006517 3.3e-08 63.5 37 75.7
SalBow4G1236 Salvia bowleyana HOM05D008082 ORTHO05D006517 5.6e-08 62.8 231 23.8
CANSAT56G1907 Cannabis sativa HOM05D008058 ORTHO05D010564 7.3e-08 62.4 140 28.6
SalBow1G2008 Salvia bowleyana HOM05D008082 ORTHO05D006517 9.5e-08 62.0 175 29.1
SalBow6G3508 Salvia bowleyana HOM05D008082 ORTHO05D006517 9.5e-08 62.0 261 25.7
Thecc.02G184700 Theobroma cacao HOM05D008181 ORTHO05D021025 9.5e-08 62.0 87 32.2
CANSAT56G3729 Cannabis sativa HOM05D008058 ORTHO05D010564 1.2e-07 61.6 151 28.5
CANSAT64G1644 Cannabis sativa HOM05D008058 ORTHO05D010564 1.2e-07 61.6 213 25.4
Thecc.06G009500 Theobroma cacao HOM05D008181 ORTHO05D010459 1.6e-07 61.2 109 31.2
Lsat_1_v5_gn_8_18001 Lactuca sativa HOM05D009439 ORTHO05D010404 2.1e-07 60.8 151 26.5
CAN.G162.75 Capsicum annuum HOM05D000541 ORTHO05D000137 2.8e-07 60.5 164 28.0
MELO3C033961.2 Cucumis melo HOM05D010240 ORTHO05D011271 2.8e-07 60.5 196 26.0
SalBow1G7890 Salvia bowleyana HOM05D009699 ORTHO05D006517 2.8e-07 60.5 140 27.9
SalBow7G1548 Salvia bowleyana HOM05D008082 ORTHO05D006517 2.8e-07 60.5 212 24.1
SalBow7G3634 Salvia bowleyana HOM05D008082 ORTHO05D006517 2.8e-07 60.5 212 24.1
Thecc.10G099400 Theobroma cacao HOM05D008181 ORTHO05D010459 3.6e-07 60.1 232 24.6
CANSAT25G3402 Cannabis sativa HOM05D008058 ORTHO05D010564 6.2e-07 59.3 153 28.8
Thecc.02G219700 Theobroma cacao HOM05D008181 ORTHO05D021025 6.2e-07 59.3 160 23.1
CANSAT56G1868 Cannabis sativa HOM05D008058 ORTHO05D010564 1.4e-06 58.2 226 26.5
CANSAT64G1886 Cannabis sativa HOM05D008058 ORTHO05D010564 1.4e-06 58.2 151 28.5
CANSAT56G1475 Cannabis sativa HOM05D008058 ORTHO05D010564 1.8e-06 57.8 136 30.1
Thecc.06G050300 Theobroma cacao HOM05D008181 ORTHO05D021025 1.8e-06 57.8 49 42.9
CANSAT21G1969 Cannabis sativa HOM05D008058 ORTHO05D010564 2.3e-06 57.4 136 29.4
SalBow6G5565 Salvia bowleyana HOM05D010871 ORTHO05D006517 2.3e-06 57.4 109 32.1
CAN.G179.14 Capsicum annuum HOM05D000541 ORTHO05D000137 3.1e-06 57.0 86 33.7
SalBow5G3432 Salvia bowleyana HOM05D009699 ORTHO05D006517 3.1e-06 57.0 181 24.9
SGA_v2.0_scaffold12G06007 Striga asiatica HOM05D011572 ORTHO05D006517 4.0e-06 56.6 45 57.8
SalBow3G1701 Salvia bowleyana HOM05D008082 ORTHO05D006517 8.9e-06 55.5 235 24.7
Sopen09g022190 Solanum pennellii HOM05D000679 ORTHO05D014686 8.9e-06 55.5 127 26.8


User provided reference genes

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