Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold41G15864 Striga asiatica HOM05D004681 ORTHO05D005541 6.5e-185 650.6 330 100.0
SGA_v2.0_scaffold21G09637 Striga asiatica HOM05D004681 ORTHO05D005541 5.4e-147 524.6 326 82.5
SalBow7G3904 Salvia bowleyana HOM05D004681 ORTHO05D005541 6.6e-145 517.7 327 80.4
MSTRG.10452 Avicennia marina HOM05D004681 ORTHO05D005541 7.5e-141 504.2 321 78.8
SalBow7G0268 Salvia bowleyana HOM05D004681 ORTHO05D005541 1.3e-137 493.4 345 75.4
Oeu000976.1 Olea europaea HOM05D004681 ORTHO05D005541 1.1e-131 473.8 327 74.6
Migut.L01897 Erythranthe guttata HOM05D004681 ORTHO05D005541 8.1e-127 457.6 322 73.9
Actinidia06358 Actinidia chinensis HOM05D004681 ORTHO05D005541 8.9e-126 454.1 321 70.4
Dinv25404 Davidia involucrata HOM05D004681 ORTHO05D005541 1.5e-125 453.4 314 71.7
Solyc07g009320.3 Solanum lycopersicum HOM05D004681 ORTHO05D005541 2.6e-125 452.6 317 72.6
Sopen07g005070 Solanum pennellii HOM05D004681 ORTHO05D005541 7.6e-125 451.1 317 72.2
GSVIVG01010902001 Vitis vinifera HOM05D004681 ORTHO05D005541 2.9e-124 449.1 318 71.4
PGSC0003DMG400008514 Solanum tuberosum HOM05D004681 ORTHO05D005541 6.4e-124 448.0 323 70.9
Actinidia22469 Actinidia chinensis HOM05D004681 ORTHO05D005541 1.6e-122 443.4 323 69.3
CAN.G1668.9 Capsicum annuum HOM05D004681 ORTHO05D005541 4.6e-122 441.8 327 69.1
Peaxi162Scf00324g00718 Petunia axillaris HOM05D004681 ORTHO05D005541 2.3e-121 439.5 329 68.1
unitig_578.g16069 Utricularia gibba HOM05D004681 ORTHO05D005541 1.9e-120 436.4 319 68.7
Nitab4.5_0010281g0010 Nicotiana tabacum HOM05D004681 ORTHO05D005541 4.8e-119 431.8 320 68.8
Cc06_g22600 Coffea canephora HOM05D004681 ORTHO05D005541 5.3e-118 428.3 321 68.8
Dinv26443 Davidia involucrata HOM05D004681 ORTHO05D005541 2.0e-117 426.4 290 74.1
Atru.chr7.819 Acer truncatum HOM05D004681 ORTHO05D005541 2.1e-114 416.4 315 66.3
Cpa.g.sc95.29 Carica papaya HOM05D004681 ORTHO05D005541 2.1e-114 416.4 322 64.3
CiPaw.07G195100 Carya illinoinensis HOM05D004681 ORTHO05D005541 2.1e-114 416.4 328 64.9
Rhsim13G0200500 Rhododendron simsii HOM05D004681 ORTHO05D005541 2.7e-114 416.0 373 60.3
Duzib170G0205 Durio zibethinus HOM05D004681 ORTHO05D005541 3.9e-113 412.1 316 65.8
TWI63G0533 Tripterygium wilfordii HOM05D004681 ORTHO05D005541 8.7e-113 411.0 326 64.4
Gohir.D08G028500 Gossypium hirsutum HOM05D004681 ORTHO05D005541 1.9e-112 409.8 320 65.3
Gohir.A08G017900 Gossypium hirsutum HOM05D004681 ORTHO05D005541 4.3e-112 408.7 320 65.3
HanXRQChr09g0266261 Helianthus annuus HOM05D004681 ORTHO05D005541 4.3e-112 408.7 320 65.6
Thecc.09G181200 Theobroma cacao HOM05D004681 ORTHO05D005541 1.3e-111 407.1 317 65.3
Cfa013431 Carpinus fangiana HOM05D004681 ORTHO05D005541 1.6e-111 406.8 326 63.2
Aqoxy7G02735 Aquilegia oxysepala HOM05D004681 ORTHO05D005541 2.1e-111 406.4 332 63.6
Eucgr.C00132 Eucalyptus grandis HOM05D004681 ORTHO05D005541 1.1e-110 404.1 328 64.9
Duzib168G0714 Durio zibethinus HOM05D004681 ORTHO05D005541 1.8e-110 403.3 313 66.5
Sc14g0001370 Simmondsia chinensis HOM05D004681 ORTHO05D005541 1.8e-110 403.3 316 65.2
Gorai.004G025600 Gossypium raimondii HOM05D004681 ORTHO05D005541 6.9e-110 401.4 331 63.1
CiPaw.08G033800 Carya illinoinensis HOM05D004681 ORTHO05D005541 1.5e-109 400.2 316 64.9
Ciclev10008916m.g Citrus clementina HOM05D004681 ORTHO05D005541 3.4e-109 399.1 321 63.6
Prupe.1G079200 Prunus persica HOM05D004681 ORTHO05D005541 3.4e-109 399.1 318 63.8
QL12p032381 Quercus lobata HOM05D004681 ORTHO05D005541 4.5e-109 398.7 326 61.0
Nitab4.5_0000074g0040 Nicotiana tabacum HOM05D004681 ORTHO05D005541 4.2e-107 392.1 292 67.8
PSO079G0045 Papaver somniferum HOM05D004681 ORTHO05D005541 5.4e-107 391.7 327 63.6
Hund09046 Selenicereus undatus HOM05D004681 ORTHO05D005541 5.4e-107 391.7 327 63.9
PSO423G0181 Papaver somniferum HOM05D004681 ORTHO05D005541 1.2e-106 390.6 327 63.0
ClCG06G013520 Citrullus lanatus HOM05D004681 ORTHO05D005541 2.1e-106 389.8 323 62.5
Ah.09g230170 Amaranthus hybridus HOM05D004681 ORTHO05D005541 6.0e-106 388.3 332 61.7
AUR62033246 Chenopodium quinoa HOM05D004681 ORTHO05D005541 1.9e-104 383.3 327 61.2
CSS0025965 Camellia sinensis var. sinensis HOM05D004681 ORTHO05D005541 4.3e-104 382.1 316 62.7
Manes.14G161401 Manihot esculenta HOM05D004681 ORTHO05D005541 5.6e-104 381.7 329 62.0
Lsat_1_v5_gn_4_183080 Lactuca sativa HOM05D004681 ORTHO05D005541 1.6e-103 380.2 320 63.1
PGR044G2653 Punica granatum HOM05D004681 ORTHO05D005541 2.8e-103 379.4 320 62.2
RcHm_v2.0_Chr4g0400191 Rosa chinensis HOM05D004681 ORTHO05D005541 8.1e-103 377.9 319 60.8
Manes.04G060300 Manihot esculenta HOM05D004681 ORTHO05D005541 1.4e-102 377.1 329 60.8
MBI13_g31546_MAGBIO Magnolia biondii HOM05D004681 ORTHO05D005541 3.1e-102 375.9 321 61.1
MELO3C017439.2 Cucumis melo HOM05D004681 ORTHO05D005541 9.0e-102 374.4 327 59.9
EL10Ac8g18317 Beta vulgaris HOM05D004681 ORTHO05D005541 1.5e-101 373.6 333 60.4
FvH4_4g07590 Fragaria vesca HOM05D004681 ORTHO05D005541 6.5e-100 368.2 322 59.3
Lj7A127G13 Lonicera japonica HOM05D004681 ORTHO05D005541 6.5e-100 368.2 279 67.7
Sp3g32480 Schrenkiella parvula HOM05D004681 ORTHO05D005541 6.5e-100 368.2 318 58.2
FAN22G1928 Fragaria x ananassa HOM05D004681 ORTHO05D005541 1.4e-99 367.1 322 58.7
FAN12G2798 Fragaria x ananassa HOM05D004681 ORTHO05D005541 1.9e-99 366.7 322 59.0
HanXRQChr10g0297571 Helianthus annuus HOM05D004681 ORTHO05D005541 3.2e-99 365.9 362 56.1
BcaB07g31622 Brassica carinata HOM05D004681 ORTHO05D005541 1.2e-98 364.0 318 58.5
CANSAT11G1051 Cannabis sativa HOM05D004681 ORTHO05D005541 1.2e-98 364.0 328 59.5
ECA232G3088 Erigeron canadensis HOM05D004681 ORTHO05D005541 2.7e-98 362.8 324 61.1
AL3G52840 Arabidopsis lyrata HOM05D004681 ORTHO05D005541 1.0e-97 360.9 319 58.0
BcaB03g16704 Brassica carinata HOM05D004681 ORTHO05D005541 1.3e-97 360.5 318 58.5
Carub.0003s3332 Capsella rubella HOM05D004681 ORTHO05D005541 1.8e-97 360.1 319 58.3
CSS0001946 Camellia sinensis var. sinensis HOM05D004681 ORTHO05D005541 3.9e-97 359.0 232 72.8
CsaV3_1G031790 Cucumis sativus L. HOM05D004681 ORTHO05D005541 5.1e-97 358.6 327 58.1
A09p12190 Brassica napus HOM05D004681 ORTHO05D005541 1.5e-96 357.1 318 57.2
BraA09t36865Z Brassica rapa HOM05D004681 ORTHO05D005541 1.9e-96 356.7 318 56.9
BcaC04g22869 Brassica carinata HOM05D004681 ORTHO05D005541 3.3e-96 355.9 318 57.2
Thhalv10022785m.g Eutrema salsugineum HOM05D004681 ORTHO05D005541 7.4e-96 354.8 318 57.2
CARHR109600 Cardamine hirsuta HOM05D004681 ORTHO05D005541 9.6e-96 354.4 321 57.3
MD13G1245600 Malus domestica HOM05D004681 ORTHO05D005541 2.1e-95 353.2 320 58.4
HPP92_004723 Vanilla planifolia HOM05D004681 ORTHO05D005541 4.8e-95 352.1 323 57.6
BolC9t54347H Brassica oleracea HOM05D004681 ORTHO05D005541 6.2e-95 351.7 319 56.7
Potri.018G145508 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.8e-94 350.1 285 63.9
C09p14440 Brassica napus HOM05D004681 ORTHO05D005541 4.0e-94 349.0 318 55.7
RcHm_v2.0_Chr7g0191541 Rosa chinensis HOM05D004681 ORTHO05D005541 4.0e-94 349.0 314 57.6
Aa31LG8G16140 Aethionema arabicum HOM05D004681 ORTHO05D005541 1.2e-93 347.4 318 56.0
Potri.006G077100 Populus trichocarpa HOM05D004681 ORTHO05D005541 2.2e-92 343.2 321 57.3
VMungo1215G0406 Vigna mungo HOM05D004681 ORTHO05D005541 2.2e-92 343.2 308 57.1
Glyma.15G164000 Glycine max HOM05D004681 ORTHO05D005541 2.9e-92 342.8 322 55.3
AT2G19080 Arabidopsis thaliana HOM05D004681 ORTHO05D005541 6.5e-92 341.7 319 55.8
Phvul.003G142900 Phaseolus vulgaris HOM05D004681 ORTHO05D005541 5.5e-91 338.6 321 55.5
BcaC06g36518 Brassica carinata HOM05D004681 ORTHO05D005541 1.6e-90 337.0 318 54.7
FAN17G0253 Fragaria x ananassa HOM05D004681 ORTHO05D005541 4.6e-90 335.5 322 55.6
Glyma.09G057900 Glycine max HOM05D004681 ORTHO05D005541 7.9e-90 334.7 323 55.1
COL.COLO4_29315 Corchorus olitorius HOM05D004681 ORTHO05D005541 1.8e-89 333.6 323 57.9
Sed0004411 Sechium edule HOM05D004681 ORTHO05D005541 3.0e-89 332.8 268 62.3
THA.LOC104819968 Tarenaya hassleriana HOM05D004681 ORTHO05D005541 1.9e-88 330.1 319 53.9
Sabra06G0058400 Salix brachista HOM05D004681 ORTHO05D005541 7.4e-88 328.2 344 52.3
arahy.Tifrunner.gnm1.ann1.K04ERL Arachis hypogaea HOM05D004681 ORTHO05D005541 1.1e-86 324.3 325 53.5
Glyma.13G099400 Glycine max HOM05D004681 ORTHO05D005541 1.4e-86 323.9 315 53.3
arahy.Tifrunner.gnm1.ann1.L4KBSE Arachis hypogaea HOM05D004681 ORTHO05D005541 3.1e-86 322.8 325 53.2
DCAR_019823 Daucus carota HOM05D004410 ORTHO05D006134 6.9e-86 321.6 329 56.5
Glyma.17G060700 Glycine max HOM05D004681 ORTHO05D005541 1.5e-85 320.5 321 53.9
Nn2g12745 Nelumbo nucifera HOM05D004681 ORTHO05D005541 4.5e-85 318.9 317 57.1
ATR0626G278 Amborella trichopoda HOM05D004681 ORTHO05D005541 1.3e-84 317.4 334 52.1
Lalb_Chr15g0084091 Lupinus albus HOM05D004681 ORTHO05D005541 5.0e-84 315.5 329 51.4
Medtr4g127630 Medicago truncatula HOM05D004681 ORTHO05D005541 1.4e-83 313.9 316 53.5
AUR62021331 Chenopodium quinoa HOM05D004681 ORTHO05D005541 2.5e-83 313.2 328 54.0
A07p01650 Brassica napus HOM05D004681 ORTHO05D005541 3.2e-83 312.8 320 51.6
BraA07t27967Z Brassica rapa HOM05D004681 ORTHO05D005541 3.2e-83 312.8 320 51.6
C07p03410 Brassica napus HOM05D004681 ORTHO05D005541 4.2e-83 312.4 318 51.6
BolC7t40740H Brassica oleracea HOM05D004681 ORTHO05D005541 4.2e-83 312.4 318 51.6
Psat0s736g0040 Pisum sativum HOM05D004681 ORTHO05D005541 7.2e-83 311.6 314 52.5
VMungo1309G2393 Vigna mungo HOM05D004681 ORTHO05D005541 1.2e-82 310.8 319 51.1
Phvul.009G237800 Phaseolus vulgaris HOM05D004681 ORTHO05D005541 1.8e-81 307.0 323 51.1
Os06g0168000 Oryza sativa ssp. japonica HOM05D004681 ORTHO05D005541 1.1e-80 304.3 325 51.4
TPR.G5388 Trifolium pratense HOM05D004681 ORTHO05D005541 1.7e-79 300.4 316 50.9
Lj6g0005497 Lotus japonicus HOM05D004681 ORTHO05D005541 4.8e-79 298.9 316 51.6
Medtr2g036910 Medicago truncatula HOM05D004681 ORTHO05D005541 6.3e-79 298.5 330 48.8
Lj4g0016729 Lotus japonicus HOM05D004681 ORTHO05D005541 5.3e-78 295.4 321 48.3
arahy.Tifrunner.gnm1.ann1.KM341F Arachis hypogaea HOM05D004681 ORTHO05D005541 9.1e-78 294.7 329 48.6
Ca_21245_v3 Cicer arietinum L. HOM05D004410 ORTHO05D006134 3.4e-77 292.7 317 50.2
TAR636G1425 Trochodendron aralioides HOM05D004681 ORTHO05D005541 1.0e-76 291.2 227 70.5
arahy.Tifrunner.gnm1.ann1.LX7F61 Arachis hypogaea HOM05D004681 ORTHO05D005541 2.5e-75 286.6 329 47.1
Lalb_Chr12g0199511 Lupinus albus HOM05D004681 ORTHO05D005541 2.5e-75 286.6 317 50.5
Ca_02042_v3 Cicer arietinum L. HOM05D004681 ORTHO05D005541 9.4e-75 284.6 328 47.0
SGA_v2.0_scaffold41G15854 Striga asiatica HOM05D004681 ORTHO05D005541 5.7e-72 275.4 275 62.9
CDE06G1906 Ceratophyllum demersum HOM05D004681 ORTHO05D005541 1.7e-71 273.9 326 49.7
HanXRQChr04g0105751 Helianthus annuus HOM05D004681 ORTHO05D005541 1.5e-69 267.3 191 67.0
TPR.G9028 Trifolium pratense HOM05D004681 ORTHO05D005541 2.6e-69 266.5 323 46.4
vmacro23062 Vaccinium macrocarpon HOM05D004681 ORTHO05D005541 2.2e-63 246.9 274 52.2
Pp3c12_12510 Physcomitrium patens HOM05D004681 ORTHO05D005541 1.2e-61 241.1 316 41.8
Psat1g145840 Pisum sativum HOM05D004681 ORTHO05D005541 1.2e-61 241.1 205 56.1
SHI02877 Sapria himalayana HOM05D004681 ORTHO05D005541 1.2e-61 241.1 308 47.1
Potri.018G147625 Populus trichocarpa HOM05D004681 ORTHO05D005541 8.5e-60 235.0 326 45.1
Mapoly0001s0301 Marchantia polymorpha HOM05D004681 ORTHO05D005541 3.1e-54 216.5 321 41.4
Pp3c4_10660 Physcomitrium patens HOM05D004681 ORTHO05D005541 9.1e-54 214.9 321 38.3
Haze_21984 Corylus avellana HOM05D004681 ORTHO05D005541 1.7e-52 210.7 211 49.8
Zm00001eb375500 Zea mays HOM05D004681 ORTHO05D005541 8.5e-52 208.4 197 53.3
CAN.G609.4 Capsicum annuum HOM05D004681 ORTHO05D005541 5.5e-51 205.7 142 66.2
RcHm_v2.0_Chr7g0191431 Rosa chinensis HOM05D004681 ORTHO05D005541 1.0e-49 201.4 295 44.7
AagrBONN_evm.TU.Sc2ySwM_228.4196 Anthoceros agrestis HOM05D004681 ORTHO05D005541 7.0e-46 188.7 321 38.0
SMO358G0154 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 3.7e-39 166.4 326 36.8
CAN.G497.61 Capsicum annuum HOM05D004681 ORTHO05D005541 8.0e-34 148.7 115 62.6
Potri.001G065336 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.5e-32 144.4 113 66.4
Ca_02046_v3 Cicer arietinum L. HOM05D004681 ORTHO05D005541 1.4e-30 137.9 226 39.8
Haze_21988 Corylus avellana HOM05D004681 ORTHO05D005541 2.0e-24 117.5 131 55.0
CAN.G266.1 Capsicum annuum HOM05D004681 ORTHO05D005541 3.4e-24 116.7 157 42.0
HanXRQChr04g0105741 Helianthus annuus HOM05D004681 ORTHO05D005541 7.5e-24 115.5 109 60.6
Potri.018G145080 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.4e-22 111.3 170 46.5
Potri.001G064609 Populus trichocarpa HOM05D004681 ORTHO05D005541 5.4e-22 109.4 79 68.4
SMO367G0296 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 9.2e-22 108.6 239 36.8
CBR_g39348 Chara braunii HOM05D000019 ORTHO05D000002 1.9e-19 100.9 185 34.1
vmacro04071 Vaccinium macrocarpon HOM05D004681 ORTHO05D005541 2.8e-18 97.1 113 54.9
Potri.001G065000 Populus trichocarpa HOM05D004681 ORTHO05D005541 1.4e-17 94.7 100 55.0
Haze_21985 Corylus avellana HOM05D004681 ORTHO05D005541 1.2e-16 91.7 112 50.0
QL05p087685 Quercus lobata HOM05D004681 ORTHO05D005541 8.4e-15 85.5 192 31.8
PRCOL_00000454 Prasinoderma coloniale HOM05D004681 ORTHO05D005541 1.3e-12 78.2 306 26.5
SMO230G0066 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 1.7e-12 77.8 227 30.0
SMO367G1182 Selaginella moellendorffii HOM05D004681 ORTHO05D005541 3.3e-11 73.6 175 32.0
AUR62034598 Chenopodium quinoa HOM05D022644 ORTHO05D003557 1.4e-09 68.2 57 57.9
Cre03.g177900 Chlamydomonas reinhardtii HOM05D004681 ORTHO05D005541 1.5e-08 64.7 306 24.8
MELO3C029108.2 Cucumis melo HOM05D004681 ORTHO05D005541 3.8e-07 60.1 79 38.0


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