Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold41G15840 Striga asiatica HOM05D009828 ORTHO05D013311 1.9e-101 372.5 183 100.0
SGA_v2.0_scaffold272G46343 Striga asiatica HOM05D009828 ORTHO05D013311 1.5e-98 362.8 183 97.8
SGA_v2.0_scaffold333G49003 Striga asiatica HOM05D009828 ORTHO05D013311 2.9e-78 295.4 179 84.9
SGA_v2.0_scaffold15G07208 Striga asiatica HOM05D009828 ORTHO05D013311 2.5e-29 132.9 201 41.8
SGA_v2.0_scaffold31G12735 Striga asiatica HOM05D009828 ORTHO05D013311 8.1e-28 127.9 191 43.5
SGA_v2.0_scaffold211G42136 Striga asiatica HOM05D009828 ORTHO05D013311 1.8e-27 126.7 177 42.9
SGA_v2.0_scaffold36G14526 Striga asiatica HOM05D009828 ORTHO05D013311 6.7e-22 108.2 237 35.9
SGA_v2.0_scaffold46G17479 Striga asiatica HOM05D009828 ORTHO05D013311 3.3e-21 105.9 182 41.8
SGA_v2.0_scaffold55G19890 Striga asiatica HOM05D009828 ORTHO05D013311 8.2e-20 101.3 136 42.6
SGA_v2.0_scaffold4G02358 Striga asiatica HOM05D009828 ORTHO05D013311 4.0e-19 99.0 173 40.5
Rhsim05G0009400 Rhododendron simsii HOM05D000017 ORTHO05D000013 6.3e-12 75.1 82 45.1
Rhsim06G0115000 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.1e-11 74.3 82 45.1
Hma1.2p1_0787F.1_g217970 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.1e-11 72.4 88 40.9
Hma1.2p1_1793F.1_g302600 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.9e-11 71.6 88 40.9
SGA_v2.0_scaffold268G46209 Striga asiatica HOM05D011541 ORTHO05D013911 1.7e-09 67.0 174 33.9
SGA_v2.0_scaffold11G05558 Striga asiatica HOM05D009828 ORTHO05D013311 2.9e-09 66.2 42 69.0
SGA_v2.0_scaffold51G18857 Striga asiatica HOM05D009828 ORTHO05D013311 3.8e-09 65.9 108 41.7
SGA_v2.0_scaffold283G46983 Striga asiatica HOM05D009828 ORTHO05D013311 8.5e-09 64.7 196 29.6
Hma1.2p1_0181F.1_g079980 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.4e-08 63.9 83 41.0
Rhsim13G0222200 Rhododendron simsii HOM05D000017 ORTHO05D000013 4.2e-08 62.4 119 35.3
SGA_v2.0_scaffold128G34095 Striga asiatica HOM05D020090 ORTHO05D021022 4.2e-08 62.4 87 40.2
Rhsim04G0080300 Rhododendron simsii HOM05D000017 ORTHO05D000013 7.2e-08 61.6 70 41.4
Rhsim09G0049900 Rhododendron simsii HOM05D000017 ORTHO05D000013 9.4e-08 61.2 82 39.0
Rhsim07G0255600 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.2e-07 60.8 82 40.2
Rhsim10G0126100 Rhododendron simsii HOM05D000017 ORTHO05D004107 1.2e-07 60.8 119 36.1
Rhsim05G0156600 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.7e-07 59.7 78 41.0
Rhsim02G0197700 Rhododendron simsii HOM05D000017 ORTHO05D000013 3.6e-07 59.3 128 32.8
Rhsim02G0019500 Rhododendron simsii HOM05D000017 ORTHO05D000013 4.6e-07 58.9 82 39.0
Rhsim03G0174600 Rhododendron simsii HOM05D000017 ORTHO05D000013 6.1e-07 58.5 91 37.4
Rhsim11G0046200 Rhododendron simsii HOM05D000017 ORTHO05D000013 6.1e-07 58.5 82 37.8
Cc11_g04540 Coffea canephora HOM05D000017 ORTHO05D013311 7.9e-07 58.2 89 36.0
Hma1.2p1_0775F.1_g216450 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 7.9e-07 58.2 82 35.4
Hma1.2p1_2873F.1_g329720 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 7.9e-07 58.2 105 36.2
Hma1.2p1_0071F.1_g038190 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.0e-06 57.8 88 37.5
Hma1.2p1_0223F.1_g094250 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.8e-06 57.0 110 34.5
Rhsim13G0199100 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.8e-06 57.0 82 37.8
Hma1.2p1_1218F.1_g267660 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.3e-06 56.6 82 39.0
Migut.N02018 Erythranthe guttata HOM05D000017 ORTHO05D000013 3.0e-06 56.2 127 32.3
Hma1.2p1_0361F.1_g135970 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.9e-06 55.8 110 34.5
Hma1.2p1_0580F.1_g182840 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.9e-06 55.8 84 35.7
Hma1.2p1_0068F.1_g037160 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.7e-06 55.1 82 34.1
Hma1.2p1_1000F.1_g246450 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 6.7e-06 55.1 113 31.9
Hma1.2p1_0199F.1_g085640 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 8.8e-06 54.7 91 37.4
Hma1.2p1_2048F.1_g312460 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 8.8e-06 54.7 129 30.2
SGA_v2.0_scaffold105G30320 Striga asiatica HOM05D011541 ORTHO05D013911 8.8e-06 54.7 158 32.3


User provided reference genes

Program Settings