Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold41G15805 Striga asiatica HOM05D005890 ORTHO05D006717 7.3e-276 953.4 514 100.0
MSTRG.26556 Avicennia marina HOM05D005890 ORTHO05D006717 3.7e-102 376.3 532 50.0
SGA_v2.0_scaffold392G50652 Striga asiatica HOM05D005890 ORTHO05D006717 3.6e-89 333.2 404 59.2
Migut.L01872 Erythranthe guttata HOM05D005890 ORTHO05D006717 1.8e-69 267.7 489 43.6
Dinv41195 Davidia involucrata HOM05D005890 ORTHO05D006717 6.6e-59 232.6 639 32.6
Cc03_g15250 Coffea canephora HOM05D005890 ORTHO05D006717 2.2e-54 217.6 579 35.2
unitig_8.g3553 Utricularia gibba HOM05D005890 ORTHO05D006717 1.4e-53 214.9 501 39.1
Hma1.2p1_0235F.1_g098760 Hydrangea macrophylla HOM05D005890 ORTHO05D006717 1.0e-51 208.8 524 35.5
Peaxi162Scf00046g00417 Petunia axillaris HOM05D005890 ORTHO05D006717 8.6e-51 205.7 479 37.8
Dinv25461 Davidia involucrata HOM05D005890 ORTHO05D006717 2.8e-49 200.7 604 34.1
GSVIVG01029286001 Vitis vinifera HOM05D005890 ORTHO05D006717 9.9e-47 192.2 525 34.7
FAN17G2561 Fragaria x ananassa HOM05D005890 ORTHO05D006717 1.3e-46 191.8 478 37.0
FAN07G1770 Fragaria x ananassa HOM05D005890 ORTHO05D006717 3.7e-46 190.3 477 37.1
Rhsim01G0114500 Rhododendron simsii HOM05D005890 ORTHO05D006717 5.4e-45 186.4 573 34.4
FAN12G2329 Fragaria x ananassa HOM05D005890 ORTHO05D006717 1.2e-44 185.3 475 35.2
Nitab4.5_0000028g0410 Nicotiana tabacum HOM05D005890 ORTHO05D006717 4.6e-44 183.3 468 35.0
Eucgr.C02214 Eucalyptus grandis HOM05D005890 ORTHO05D006717 7.8e-44 182.6 545 32.5
MD16G1246300 Malus domestica HOM05D005890 ORTHO05D006717 1.3e-43 181.8 511 35.0
Oeu063100.1 Olea europaea HOM05D005890 ORTHO05D006717 1.9e-42 177.9 214 54.2
DCAR_018014 Daucus carota HOM05D005890 ORTHO05D006717 5.6e-42 176.4 491 36.3
VMungo1215G0729 Vigna mungo HOM05D005890 ORTHO05D006717 1.2e-41 175.3 485 35.1
QL07p048247 Quercus lobata HOM05D005890 ORTHO05D006717 1.6e-41 174.9 523 32.7
Cfa013466 Carpinus fangiana HOM05D005890 ORTHO05D006717 6.2e-41 172.9 528 33.9
ClCG06G013720 Citrullus lanatus HOM05D005890 ORTHO05D006717 8.1e-41 172.6 485 33.4
Gorai.012G008900 Gossypium raimondii HOM05D005890 ORTHO05D006717 8.1e-41 172.6 496 35.7
CAN.G403.1 Capsicum annuum HOM05D005890 ORTHO05D006717 1.4e-40 171.8 487 34.5
Gohir.A05G408300 Gossypium hirsutum HOM05D005890 ORTHO05D006717 1.4e-40 171.8 496 35.5
CsaV3_3G012070 Cucumis sativus L. HOM05D005890 ORTHO05D006717 3.1e-40 170.6 492 35.8
Actinidia02494 Actinidia chinensis HOM05D005890 ORTHO05D006717 6.8e-40 169.5 536 33.0
CSS0049336 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 1.2e-39 168.7 256 46.9
Prupe.1G073000 Prunus persica HOM05D005890 ORTHO05D006717 1.2e-39 168.7 493 32.9
PGSC0003DMG400019897 Solanum tuberosum HOM05D005890 ORTHO05D006717 2.0e-39 167.9 493 32.5
Sed0014693 Sechium edule HOM05D005890 ORTHO05D006717 3.4e-39 167.2 501 35.3
Glyma.13G101600 Glycine max HOM05D005890 ORTHO05D006717 5.8e-39 166.4 474 34.2
MELO3C006422.2 Cucumis melo HOM05D005890 ORTHO05D006717 1.3e-38 165.2 496 33.5
Ciclev10008727m.g Citrus clementina HOM05D005890 ORTHO05D006717 2.2e-38 164.5 315 41.9
CANSAT01G0113 Cannabis sativa HOM05D005890 ORTHO05D006717 2.9e-38 164.1 472 34.3
Nitab4.5_0004916g0020 Nicotiana tabacum HOM05D005890 ORTHO05D006717 3.8e-38 163.7 487 32.6
HanXRQChr03g0065401 Helianthus annuus HOM05D005890 ORTHO05D006717 4.9e-38 163.3 479 33.8
Potri.018G140200 Populus trichocarpa HOM05D005890 ORTHO05D006717 4.9e-38 163.3 517 32.9
Duzib170G1164 Durio zibethinus HOM05D005890 ORTHO05D006717 8.4e-38 162.5 569 32.7
Thecc.09G191500 Theobroma cacao HOM05D005890 ORTHO05D006717 1.1e-37 162.2 539 32.5
TWI32G1283 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 1.1e-37 162.2 538 32.7
Sopen07g004220 Solanum pennellii HOM05D005890 ORTHO05D006717 2.4e-37 161.0 474 33.8
vmacro20806 Vaccinium macrocarpon HOM05D005890 ORTHO05D006717 4.2e-37 160.2 618 30.7
Glyma.17G058000 Glycine max HOM05D005890 ORTHO05D006717 1.6e-36 158.3 437 33.0
RcHm_v2.0_Chr4g0398981 Rosa chinensis HOM05D005890 ORTHO05D006717 1.6e-36 158.3 490 33.9
Solyc07g008330.3 Solanum lycopersicum HOM05D005890 ORTHO05D006717 7.8e-36 156.0 472 33.5
ECA240G0208 Erigeron canadensis HOM05D005890 ORTHO05D006717 1.3e-35 155.2 546 31.7
Potri.006G073100 Populus trichocarpa HOM05D005890 ORTHO05D006717 3.0e-35 154.1 535 30.1
PGR044G2166 Punica granatum HOM05D005890 ORTHO05D006717 5.1e-35 153.3 526 31.4
Medtr4g127160 Medicago truncatula HOM05D005890 ORTHO05D006717 8.7e-35 152.5 502 33.5
Phvul.003G140452 Phaseolus vulgaris HOM05D005890 ORTHO05D006717 8.7e-35 152.5 499 31.3
Ah.14g085350 Amaranthus hybridus HOM05D005890 ORTHO05D006717 1.9e-34 151.4 476 31.9
arahy.Tifrunner.gnm1.ann1.CB00ZF Arachis hypogaea HOM05D005890 ORTHO05D006717 3.3e-34 150.6 472 35.0
CiPaw.07G198700 Carya illinoinensis HOM05D005890 ORTHO05D006717 5.6e-34 149.8 470 32.6
AUR62027422 Chenopodium quinoa HOM05D005890 ORTHO05D006717 7.3e-34 149.4 481 33.3
Lsat_1_v5_gn_7_55781 Lactuca sativa HOM05D005890 ORTHO05D006717 7.3e-34 149.4 488 33.2
Lalb_Chr13g0299851 Lupinus albus HOM05D005890 ORTHO05D006717 2.1e-33 147.9 485 33.0
THA.LOC104813501 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 2.1e-33 147.9 451 34.8
arahy.Tifrunner.gnm1.ann1.V3N0NP Arachis hypogaea HOM05D005890 ORTHO05D006717 2.8e-33 147.5 472 34.5
Atru.BG.17.p Acer truncatum HOM05D005890 ORTHO05D006717 3.6e-33 147.1 467 31.9
Nn8g40670 Nelumbo nucifera HOM05D005890 ORTHO05D006717 6.2e-33 146.4 629 29.3
TWI34G1560 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 8.1e-33 146.0 473 34.2
EL10Ac8g19296 Beta vulgaris HOM05D005890 ORTHO05D006717 1.8e-32 144.8 483 30.4
HanXRQChr10g0308981 Helianthus annuus HOM05D005890 ORTHO05D006717 1.8e-32 144.8 444 34.0
Lj4g0027857 Lotus japonicus HOM05D005890 ORTHO05D006717 2.4e-32 144.4 475 32.4
TAR637G0001 Trochodendron aralioides HOM05D005890 ORTHO05D006717 2.4e-32 144.4 120 65.8
Manes.06G017800 Manihot esculenta HOM05D005890 ORTHO05D006717 4.0e-32 143.7 524 30.5
Sabra06G0054500 Salix brachista HOM05D005890 ORTHO05D006717 1.2e-31 142.1 518 30.9
Sed0024384 Sechium edule HOM05D005890 ORTHO05D006717 1.2e-31 142.1 459 30.9
THA.LOC104817770 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 9.9e-31 139.0 472 31.6
Aqoxy7G02888 Aquilegia oxysepala HOM05D005890 ORTHO05D006717 2.2e-30 137.9 320 36.6
AUR62031274 Chenopodium quinoa HOM05D005890 ORTHO05D006717 2.2e-30 137.9 480 29.6
ATR1098G092 Amborella trichopoda HOM05D005890 ORTHO05D006717 3.8e-30 137.1 403 35.2
Atru.chr7.926 Acer truncatum HOM05D005890 ORTHO05D006717 7.1e-29 132.9 248 42.3
Os12g0613500 Oryza sativa ssp. japonica HOM05D005890 ORTHO05D006717 1.2e-28 132.1 448 30.1
Lsat_1_v5_gn_5_83860 Lactuca sativa HOM05D005890 ORTHO05D006717 1.6e-28 131.7 451 31.3
Cpa.g.sc115.65 Carica papaya HOM05D005890 ORTHO05D006717 2.1e-28 131.3 220 42.3
Sp6g18850 Schrenkiella parvula HOM05D005890 ORTHO05D006717 2.7e-28 131.0 486 29.8
SEGI_20539 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 1.7e-27 128.3 119 57.1
CDE02G0471 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 2.3e-27 127.9 491 31.6
CDE05G3513 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 2.3e-27 127.9 247 40.1
BcaB08g36002 Brassica carinata HOM05D005890 ORTHO05D006717 3.9e-27 127.1 146 50.0
Thhalv10013871m.g Eutrema salsugineum HOM05D005890 ORTHO05D006717 3.9e-27 127.1 488 31.4
Psat4g014480 Pisum sativum HOM05D005890 ORTHO05D006717 5.1e-27 126.7 113 58.4
Hund24378 Selenicereus undatus HOM05D005890 ORTHO05D006717 5.1e-27 126.7 509 29.1
BraA02t05941Z Brassica rapa HOM05D005890 ORTHO05D006717 6.6e-27 126.3 152 48.7
ECA234G0353 Erigeron canadensis HOM05D005890 ORTHO05D006717 8.7e-27 125.9 441 32.0
Ca_21262_v3 Cicer arietinum L. HOM05D005890 ORTHO05D006717 1.5e-26 125.2 486 28.6
HPP92_018699 Vanilla planifolia HOM05D005890 ORTHO05D006717 1.5e-26 125.2 490 32.0
MBI18_g10586_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 4.3e-26 123.6 569 26.7
Aa31LG3G13020 Aethionema arabicum HOM05D005890 ORTHO05D006717 5.6e-26 123.2 478 29.7
A02p08710 Brassica napus HOM05D005890 ORTHO05D006717 2.1e-25 121.3 179 45.3
BcaB05g22318 Brassica carinata HOM05D005890 ORTHO05D006717 4.8e-25 120.2 487 31.4
Pp3c3_34440 Physcomitrium patens HOM05D005890 ORTHO05D006717 9.0e-24 115.9 193 43.5
Pp3c3_34441 Physcomitrium patens HOM05D005890 ORTHO05D006717 9.0e-24 115.9 193 43.5
COL.COLO4_08570 Corchorus olitorius HOM05D005890 ORTHO05D006717 1.5e-23 115.2 608 26.8
BolC9t57729H Brassica oleracea HOM05D005890 ORTHO05D006717 2.0e-23 114.8 290 36.2
MBI14_g15782_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 2.6e-23 114.4 240 38.8
C09p48820 Brassica napus HOM05D005890 ORTHO05D006717 3.4e-23 114.0 290 36.2
PSO063G0609 Papaver somniferum HOM05D005890 ORTHO05D006717 1.3e-22 112.1 502 29.5
BcaC04g20011 Brassica carinata HOM05D005890 ORTHO05D006717 1.1e-21 109.0 304 34.9
TPR.G5393 Trifolium pratense HOM05D005890 ORTHO05D006717 5.5e-21 106.7 496 30.0
Zm00001eb136110 Zea mays HOM05D005890 ORTHO05D006717 5.5e-21 106.7 526 26.8
MD13G1240600 Malus domestica HOM05D005890 ORTHO05D006717 7.1e-21 106.3 420 33.3
Mapoly0009s0141 Marchantia polymorpha HOM05D005890 ORTHO05D006717 9.3e-21 105.9 144 42.4
FvH4_4g06950 Fragaria vesca HOM05D005890 ORTHO05D006717 1.6e-20 105.1 388 30.7
Zm00001eb172010 Zea mays HOM05D005890 ORTHO05D006717 1.6e-20 105.1 214 36.4
CSS0049604 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 7.9e-20 102.8 242 37.2
CARHR270890 Cardamine hirsuta HOM05D005890 ORTHO05D006717 7.9e-20 102.8 488 29.5
PSO170G0082 Papaver somniferum HOM05D005890 ORTHO05D006717 1.8e-19 101.7 494 29.6
BcaC03g14182 Brassica carinata HOM05D005890 ORTHO05D006717 1.5e-18 98.6 486 28.8
C02p14590 Brassica napus HOM05D005890 ORTHO05D006717 1.5e-18 98.6 486 28.8
BolC2t07586H Brassica oleracea HOM05D005890 ORTHO05D006717 1.5e-18 98.6 486 28.8
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 4.3e-18 97.1 131 48.9
Gohir.D04G007200 Gossypium hirsutum HOM05D005890 ORTHO05D006717 1.3e-17 95.5 413 29.8
CBR_g20282 Chara braunii HOM05D000019 ORTHO05D000002 1.6e-17 95.1 108 50.9
AL8G33040 Arabidopsis lyrata HOM05D005890 ORTHO05D006717 2.1e-17 94.7 111 51.4
AT5G57120 Arabidopsis thaliana HOM05D005890 ORTHO05D006717 8.1e-17 92.8 111 48.6
Carub.0008s1762 Capsella rubella HOM05D005890 ORTHO05D006717 3.1e-16 90.9 70 64.3
SEGI_22268 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 4.0e-16 90.5 56 78.6
AagrBONN_evm.TU.Sc2ySwM_368.973 Anthoceros agrestis HOM05D005890 ORTHO05D006717 2.2e-14 84.7 328 30.8
Zm00001eb394450 Zea mays HOM05D014690 ORTHO05D006717 4.6e-12 77.0 55 67.3
Sabra18G0114500 Salix brachista HOM05D005890 ORTHO05D006717 5.7e-10 70.1 419 28.6
MCO09G065 Micromonas commoda HOM05D005890 ORTHO05D006717 8.2e-09 66.2 53 67.9
A10p14440 Brassica napus HOM05D005890 ORTHO05D006717 1.4e-08 65.5 35 82.9
BraA10t43535Z Brassica rapa HOM05D005890 ORTHO05D006717 1.4e-08 65.5 35 82.9
Haze_22044 Corylus avellana HOM05D005890 ORTHO05D006717 2.4e-08 64.7 254 31.9
Cre01.g055400 Chlamydomonas reinhardtii HOM05D005890 ORTHO05D006717 3.1e-08 64.3 52 63.5
MBI14_g15781_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 4.5e-07 60.5 171 27.5
DCAR_001127 Daucus carota HOM05D000703 ORTHO05D006717 2.9e-06 57.8 31 80.6
CiPaw.08G031700 Carya illinoinensis HOM05D005890 ORTHO05D006717 5.0e-06 57.0 511 27.8


User provided reference genes

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