Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold41G15778 Striga asiatica HOM05D023227 ORTHO05D023168 4.8e-85 317.8 157 100.0
SGA_v2.0_scaffold17G07986 Striga asiatica HOM05D023227 ORTHO05D023168 4.1e-20 102.1 85 67.1
SGA_v2.0_scaffold326G48733 Striga asiatica HOM05D023227 ORTHO05D023168 9.1e-20 100.9 63 81.0
SGA_v2.0_scaffold16G07878 Striga asiatica HOM05D023227 ORTHO05D023168 7.7e-19 97.8 63 77.8
SGA_v2.0_scaffold192G40616 Striga asiatica HOM05D000100 ORTHO05D000052 1.8e-15 86.7 83 54.2
SGA_v2.0_scaffold83G26373 Striga asiatica HOM05D023227 ORTHO05D023168 6.8e-15 84.7 57 75.4
MSTRG.27075 Avicennia marina HOM05D000100 ORTHO05D000052 5.9e-11 71.6 70 48.6
Migut.F00274 Erythranthe guttata HOM05D000100 ORTHO05D000052 2.3e-10 69.7 63 52.4
HanXRQChr14g0448921 Helianthus annuus HOM05D000100 ORTHO05D000052 8.6e-10 67.8 102 36.3
ECA232G2996 Erigeron canadensis HOM05D000100 ORTHO05D000052 1.5e-09 67.0 95 38.9
HanXRQChr14g0462611 Helianthus annuus HOM05D000100 ORTHO05D000052 5.6e-09 65.1 95 36.8
BcaNung06441 Brassica carinata HOM05D000100 ORTHO05D000052 9.5e-09 64.3 65 47.7
C05p49780 Brassica napus HOM05D000100 ORTHO05D000052 9.5e-09 64.3 65 47.7
BolC5t33729H Brassica oleracea HOM05D000100 ORTHO05D000052 9.5e-09 64.3 65 46.2
SalBow4G0086 Salvia bowleyana HOM05D000100 ORTHO05D000052 1.2e-08 63.9 53 54.7
Actinidia08593 Actinidia chinensis HOM05D000100 ORTHO05D000052 1.6e-08 63.5 89 39.3
SalBow4G1158 Salvia bowleyana HOM05D000100 ORTHO05D000052 1.6e-08 63.5 62 48.4
vmacro06608 Vaccinium macrocarpon HOM05D000100 ORTHO05D000052 1.6e-08 63.5 91 38.5
Thhalv10020674m.g Eutrema salsugineum HOM05D000100 ORTHO05D000052 2.1e-08 63.2 68 41.2
BcaB06g25755 Brassica carinata HOM05D000100 ORTHO05D000052 2.8e-08 62.8 65 43.1
Lj1C1008T2 Lonicera japonica HOM05D000100 ORTHO05D000052 2.8e-08 62.8 90 40.0
Cfa021270 Carpinus fangiana HOM05D000100 ORTHO05D000052 3.6e-08 62.4 89 39.3
Ca_27166_v3 Cicer arietinum L. HOM05D000100 ORTHO05D000052 3.6e-08 62.4 87 37.9
Rhsim03G0192900 Rhododendron simsii HOM05D000100 ORTHO05D000052 4.7e-08 62.0 91 35.2
Rhsim03G0194400 Rhododendron simsii HOM05D000100 ORTHO05D000052 4.7e-08 62.0 91 35.2
Sabra04G0046900 Salix brachista HOM05D000100 ORTHO05D000052 4.7e-08 62.0 89 34.8
Sabra04G0046700 Salix brachista HOM05D000100 ORTHO05D000052 6.1e-08 61.6 89 37.1
MD01G1210700 Malus domestica HOM05D000100 ORTHO05D000052 8.0e-08 61.2 69 44.9
CANSAT35G0375 Cannabis sativa HOM05D000100 ORTHO05D000052 1.0e-07 60.8 99 34.3
HanXRQChr14g0448891 Helianthus annuus HOM05D000100 ORTHO05D000052 1.0e-07 60.8 95 35.8
Potri.004G070900 Populus trichocarpa HOM05D000100 ORTHO05D000052 1.0e-07 60.8 89 36.0
unitig_747.g21419 Utricularia gibba HOM05D000100 ORTHO05D000052 1.0e-07 60.8 69 39.1
A05p32990 Brassica napus HOM05D000100 ORTHO05D000052 1.4e-07 60.5 65 41.5
BraA05t22125Z Brassica rapa HOM05D000100 ORTHO05D000052 1.4e-07 60.5 65 41.5
MD07G1280800 Malus domestica HOM05D000100 ORTHO05D000052 1.4e-07 60.5 69 42.0
Oeu049090.2 Olea europaea HOM05D000100 ORTHO05D000052 1.8e-07 60.1 89 37.1
RcHm_v2.0_Chr1g0378931 Rosa chinensis HOM05D000100 ORTHO05D000052 1.8e-07 60.1 69 43.5
MD01G1210600 Malus domestica HOM05D000100 ORTHO05D000052 2.3e-07 59.7 63 42.9
Eucgr.A02700 Eucalyptus grandis HOM05D000100 ORTHO05D000052 3.0e-07 59.3 69 39.1
Rhsim03G0192800 Rhododendron simsii HOM05D000100 ORTHO05D000052 3.0e-07 59.3 96 35.4
Sabra14G0127900 Salix brachista HOM05D000100 ORTHO05D000052 3.0e-07 59.3 89 36.0
Cc02_g02190 Coffea canephora HOM05D000100 ORTHO05D000052 4.0e-07 58.9 95 37.9
Haze_09243 Corylus avellana HOM05D000100 ORTHO05D000052 4.0e-07 58.9 95 34.7
DCAR_020277 Daucus carota HOM05D000039 ORTHO05D000052 4.0e-07 58.9 90 35.6
DCAR_020278 Daucus carota HOM05D000100 ORTHO05D000052 4.0e-07 58.9 90 35.6
TPR.G39079 Trifolium pratense HOM05D000100 ORTHO05D000052 4.0e-07 58.9 87 37.9
GSVIVG01028812001 Vitis vinifera HOM05D000100 ORTHO05D000052 4.0e-07 58.9 63 44.4
Cfa015761 Carpinus fangiana HOM05D000100 ORTHO05D000052 5.2e-07 58.5 95 35.8
FAN10G1455 Fragaria x ananassa HOM05D000100 ORTHO05D000052 5.2e-07 58.5 69 42.0
Atru.chr4.1145 Acer truncatum HOM05D000100 ORTHO05D000052 6.8e-07 58.2 53 52.8
CSS0024413 Camellia sinensis var. sinensis HOM05D000100 ORTHO05D000052 6.8e-07 58.2 82 39.0
Cfa016310 Carpinus fangiana HOM05D000100 ORTHO05D000052 6.8e-07 58.2 95 35.8
Potri.004G071000 Populus trichocarpa HOM05D000100 ORTHO05D000052 6.8e-07 58.2 89 33.7
Cfa019513 Carpinus fangiana HOM05D000100 ORTHO05D000052 8.9e-07 57.8 95 34.7
Eucgr.A02706 Eucalyptus grandis HOM05D000100 ORTHO05D000052 8.9e-07 57.8 69 37.7
FvH4_1g30110 Fragaria vesca HOM05D000100 ORTHO05D000052 8.9e-07 57.8 69 42.0
FAN19G1572 Fragaria x ananassa HOM05D000100 ORTHO05D000052 8.9e-07 57.8 69 42.0
FAN28G1892 Fragaria x ananassa HOM05D000100 ORTHO05D000052 8.9e-07 57.8 69 42.0
Oeu049085.1 Olea europaea HOM05D000100 ORTHO05D000052 8.9e-07 57.8 63 42.9
Potri.004G070000 Populus trichocarpa HOM05D000100 ORTHO05D000052 8.9e-07 57.8 89 33.7
GSVIVG01028807001 Vitis vinifera HOM05D000100 ORTHO05D000052 8.9e-07 57.8 95 34.7
Ciclev10004867m.g Citrus clementina HOM05D000100 ORTHO05D000052 1.2e-06 57.4 56 48.2
Duzib205G0296 Durio zibethinus HOM05D000100 ORTHO05D000052 1.2e-06 57.4 95 34.7
FAN26G2474 Fragaria x ananassa HOM05D000100 ORTHO05D000052 1.2e-06 57.4 69 42.0
Carub.0003s1627 Capsella rubella HOM05D000100 ORTHO05D000052 1.5e-06 57.0 65 36.9
CiPaw.05G260800 Carya illinoinensis HOM05D000100 ORTHO05D000052 1.5e-06 57.0 63 44.4
Haze_00065 Corylus avellana HOM05D000100 ORTHO05D000052 1.5e-06 57.0 95 34.7
Sp3g14870 Schrenkiella parvula HOM05D000100 ORTHO05D000052 1.5e-06 57.0 64 37.5
Gohir.A02G104400 Gossypium hirsutum HOM05D000100 ORTHO05D000052 2.0e-06 56.6 120 31.7
Lsat_1_v5_gn_9_56880 Lactuca sativa HOM05D000100 ORTHO05D000052 2.0e-06 56.6 102 31.4
QL09p012282 Quercus lobata HOM05D000100 ORTHO05D000052 2.0e-06 56.6 99 35.4
HanXRQChr14g0448931 Helianthus annuus HOM05D000100 ORTHO05D000052 2.6e-06 56.2 88 38.6
Oeu049093.1 Olea europaea HOM05D000100 ORTHO05D000052 2.6e-06 56.2 89 36.0
Potri.004G069600 Populus trichocarpa HOM05D000100 ORTHO05D000052 2.6e-06 56.2 89 33.7
PGR042G2291 Punica granatum HOM05D000100 ORTHO05D000052 2.6e-06 56.2 65 44.6
arahy.Tifrunner.gnm1.ann1.B8YTYR Arachis hypogaea HOM05D000100 ORTHO05D000052 3.4e-06 55.8 55 47.3
CSS0048859 Camellia sinensis var. sinensis HOM05D000100 ORTHO05D000052 3.4e-06 55.8 90 35.6
Eucgr.A02703 Eucalyptus grandis HOM05D000100 ORTHO05D000052 3.4e-06 55.8 66 43.9
Gohir.D03G079400 Gossypium hirsutum HOM05D000100 ORTHO05D000052 3.4e-06 55.8 120 31.7
Gorai.003G084700 Gossypium raimondii HOM05D000100 ORTHO05D000052 3.4e-06 55.8 120 31.7
FAN10G0530 Fragaria x ananassa HOM05D000100 ORTHO05D000052 4.4e-06 55.5 69 40.6
Hma1.2p1_0327F.1_g126530 Hydrangea macrophylla HOM05D000100 ORTHO05D000052 4.4e-06 55.5 89 37.1
QL09p012253 Quercus lobata HOM05D000100 ORTHO05D000052 4.4e-06 55.5 86 39.5
GSVIVG01028811001 Vitis vinifera HOM05D000100 ORTHO05D000052 4.4e-06 55.5 63 42.9
Oeu049084.1 Olea europaea HOM05D000100 ORTHO05D000052 5.8e-06 55.1 97 33.0
Rhsim03G0192700 Rhododendron simsii HOM05D000100 ORTHO05D000052 5.8e-06 55.1 95 32.6
CSS0011112 Camellia sinensis var. sinensis HOM05D000100 ORTHO05D000052 7.5e-06 54.7 63 42.9
Duzib068G0810 Durio zibethinus HOM05D000100 ORTHO05D000052 7.5e-06 54.7 95 31.6
FAN06G4366 Fragaria x ananassa HOM05D000100 ORTHO05D000052 7.5e-06 54.7 69 40.6
Potri.004G069800 Populus trichocarpa HOM05D000100 ORTHO05D000052 7.5e-06 54.7 89 32.6
vmacro06610 Vaccinium macrocarpon HOM05D000100 ORTHO05D000052 7.5e-06 54.7 89 34.8
HPP92_008830 Vanilla planifolia HOM05D000100 ORTHO05D000052 7.5e-06 54.7 79 40.5
Actinidia34167 Actinidia chinensis HOM05D000100 ORTHO05D000052 9.8e-06 54.3 95 32.6
Haze_00067 Corylus avellana HOM05D000100 ORTHO05D000052 9.8e-06 54.3 89 32.6
TWI39G0931 Tripterygium wilfordii HOM05D000100 ORTHO05D000052 9.8e-06 54.3 102 29.4


User provided reference genes

Program Settings