Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold41G15739 Striga asiatica HOM05D004998 ORTHO05D006104 1.3e-94 349.7 185 100.0
Migut.D02075 Erythranthe guttata HOM05D004998 ORTHO05D006104 1.9e-56 223.0 191 69.6
SalBow3G1756 Salvia bowleyana HOM05D004998 ORTHO05D006104 4.2e-48 195.3 191 61.8
CSS0033668 Camellia sinensis var. sinensis HOM05D004998 ORTHO05D006104 1.0e-46 190.7 191 56.0
Dinv17028 Davidia involucrata HOM05D004998 ORTHO05D006104 3.7e-44 182.2 188 56.9
Dinv42976 Davidia involucrata HOM05D004998 ORTHO05D006104 3.7e-44 182.2 188 56.9
Dinv43123 Davidia involucrata HOM05D004998 ORTHO05D006104 3.7e-44 182.2 188 56.9
MSTRG.18567 Avicennia marina HOM05D004998 ORTHO05D006104 3.4e-42 175.6 192 60.9
Rhsim13G0078800 Rhododendron simsii HOM05D004998 ORTHO05D006104 3.8e-41 172.2 184 54.9
CSS0032367 Camellia sinensis var. sinensis HOM05D004998 ORTHO05D006104 6.5e-41 171.4 188 56.9
Atru.chr3.3979 Acer truncatum HOM05D004998 ORTHO05D006104 1.1e-40 170.6 189 56.1
Lj1A149T62 Lonicera japonica HOM05D004998 ORTHO05D006104 1.1e-40 170.6 188 52.7
Actinidia23927 Actinidia chinensis HOM05D004998 ORTHO05D006104 1.4e-40 170.2 184 54.9
TAR636G1117 Trochodendron aralioides HOM05D004998 ORTHO05D006104 1.4e-40 170.2 188 54.3
Cc01_g13080 Coffea canephora HOM05D004998 ORTHO05D006104 3.2e-40 169.1 194 53.6
Hma1.2p1_0615F.1_g189810 Hydrangea macrophylla HOM05D004998 ORTHO05D006104 9.4e-40 167.5 189 54.0
Actinidia34418 Actinidia chinensis HOM05D004998 ORTHO05D006104 4.6e-39 165.2 188 53.2
vmacro03047 Vaccinium macrocarpon HOM05D004998 ORTHO05D006104 2.3e-38 162.9 185 53.0
Nn2g11147 Nelumbo nucifera HOM05D004998 ORTHO05D006104 3.0e-38 162.5 191 50.8
Cfa011521 Carpinus fangiana HOM05D004998 ORTHO05D006104 5.1e-38 161.8 185 54.1
Ciclev10029345m.g Citrus clementina HOM05D004998 ORTHO05D006104 5.1e-38 161.8 189 52.9
PGSC0003DMG400002149 Solanum tuberosum HOM05D004998 ORTHO05D006104 6.7e-38 161.4 192 53.1
FvH4_3g36750 Fragaria vesca HOM05D004998 ORTHO05D006104 1.1e-37 160.6 184 53.3
Sabra09G0023800 Salix brachista HOM05D004998 ORTHO05D006104 1.1e-37 160.6 185 55.1
GSVIVG01024930001 Vitis vinifera HOM05D004998 ORTHO05D006104 1.1e-37 160.6 188 52.7
Sopen06g001560 Solanum pennellii HOM05D004998 ORTHO05D006104 1.5e-37 160.2 191 51.3
Eucgr.B02327 Eucalyptus grandis HOM05D004998 ORTHO05D006104 2.0e-37 159.8 189 51.9
Oeu053883.1 Olea europaea HOM05D004998 ORTHO05D006104 4.4e-37 158.7 171 57.3
Prupe.6G073200 Prunus persica HOM05D004998 ORTHO05D006104 4.4e-37 158.7 187 52.9
Solyc06g005600.3 Solanum lycopersicum HOM05D004998 ORTHO05D006104 4.4e-37 158.7 191 50.8
TWI79G0863 Tripterygium wilfordii HOM05D004998 ORTHO05D006104 7.4e-37 157.9 189 53.4
CiPaw.14G067400 Carya illinoinensis HOM05D004998 ORTHO05D006104 9.7e-37 157.5 186 52.2
QL01p031100 Quercus lobata HOM05D004998 ORTHO05D006104 1.7e-36 156.8 187 51.9
Nitab4.5_0000272g0050 Nicotiana tabacum HOM05D004998 ORTHO05D006104 2.8e-36 156.0 204 51.5
Potri.009G033400 Populus trichocarpa HOM05D004998 ORTHO05D006104 2.8e-36 156.0 190 53.2
TWI75G0636 Tripterygium wilfordii HOM05D004998 ORTHO05D006104 6.3e-36 154.8 191 53.4
Nn2g13381 Nelumbo nucifera HOM05D004998 ORTHO05D006104 8.2e-36 154.5 185 51.9
FAN11G2014 Fragaria x ananassa HOM05D004998 ORTHO05D006104 1.4e-35 153.7 184 52.2
Glyma.15G036800 Glycine max HOM05D004998 ORTHO05D006104 1.8e-35 153.3 182 51.6
RcHm_v2.0_Chr5g0065711 Rosa chinensis HOM05D004998 ORTHO05D006104 4.1e-35 152.1 185 53.0
Thecc.09G318900 Theobroma cacao HOM05D004998 ORTHO05D006104 4.1e-35 152.1 179 53.6
MBI14_g12121_MAGBIO Magnolia biondii HOM05D004998 ORTHO05D006104 9.1e-35 151.0 191 50.8
EL10Ac7g16043 Beta vulgaris HOM05D004998 ORTHO05D006104 1.5e-34 150.2 190 51.1
Gohir.A05G094300 Gossypium hirsutum HOM05D004998 ORTHO05D006104 2.0e-34 149.8 180 53.3
TAR633G0520 Trochodendron aralioides HOM05D004998 ORTHO05D006104 2.6e-34 149.4 189 48.1
PGR102G0830 Punica granatum HOM05D004998 ORTHO05D006104 5.9e-34 148.3 191 51.3
COL.COLO4_18543 Corchorus olitorius HOM05D004998 ORTHO05D006104 1.0e-33 147.5 180 52.8
Phvul.L006843 Phaseolus vulgaris HOM05D004998 ORTHO05D006104 1.0e-33 147.5 182 48.4
Hund18896 Selenicereus undatus HOM05D004998 ORTHO05D006104 1.3e-33 147.1 190 50.5
MD03G1088800 Malus domestica HOM05D004998 ORTHO05D006104 2.9e-33 146.0 189 50.8
Peaxi162Scf00092g01117 Petunia axillaris HOM05D004998 ORTHO05D006104 5.0e-33 145.2 191 49.2
VMungo1080G1028 Vigna mungo HOM05D004998 ORTHO05D006104 1.1e-32 144.1 182 48.4
Duzib150G0269 Durio zibethinus HOM05D004998 ORTHO05D006104 2.5e-32 142.9 179 52.5
FAN21G1380 Fragaria x ananassa HOM05D004998 ORTHO05D006104 2.5e-32 142.9 189 50.8
HanXRQChr07g0197281 Helianthus annuus HOM05D004998 ORTHO05D006104 2.5e-32 142.9 187 50.3
ClCG02G020020 Citrullus lanatus HOM05D004998 ORTHO05D006104 4.2e-32 142.1 189 50.3
Duzib168G2185 Durio zibethinus HOM05D004998 ORTHO05D006104 5.5e-32 141.7 179 49.2
Glyma.13G337700 Glycine max HOM05D004998 ORTHO05D006104 9.4e-32 141.0 182 50.5
CsaV3_6G016720 Cucumis sativus L. HOM05D004998 ORTHO05D006104 1.6e-31 140.2 187 47.1
MD11G1097800 Malus domestica HOM05D004998 ORTHO05D006104 2.7e-31 139.4 189 49.2
FAN16G3214 Fragaria x ananassa HOM05D004998 ORTHO05D006104 4.7e-31 138.7 202 47.5
arahy.Tifrunner.gnm1.ann1.AD2TJP Arachis hypogaea HOM05D004998 ORTHO05D006104 1.4e-30 137.1 190 50.0
AUR62009547 Chenopodium quinoa HOM05D004998 ORTHO05D006104 1.4e-30 137.1 189 47.6
THA.LOC104810769 Tarenaya hassleriana HOM05D004998 ORTHO05D006104 1.4e-30 137.1 185 49.2
arahy.Tifrunner.gnm1.ann1.JSTV8M Arachis hypogaea HOM05D004998 ORTHO05D006104 1.8e-30 136.7 190 50.0
DCAR_005961 Daucus carota HOM05D004998 ORTHO05D006104 1.8e-30 136.7 190 46.3
AUR62001761 Chenopodium quinoa HOM05D004998 ORTHO05D006104 2.3e-30 136.3 189 47.1
Manes.01G171600 Manihot esculenta HOM05D004998 ORTHO05D006104 2.3e-30 136.3 193 49.2
CiPaw.13G091800 Carya illinoinensis HOM05D004998 ORTHO05D006104 5.2e-30 135.2 176 50.6
Lj3g0014072 Lotus japonicus HOM05D004998 ORTHO05D006104 5.2e-30 135.2 180 49.4
Gohir.D05G094800 Gossypium hirsutum HOM05D004998 ORTHO05D006104 2.0e-29 133.3 180 48.3
Gorai.009G098000 Gossypium raimondii HOM05D004998 ORTHO05D006104 2.6e-29 132.9 180 48.3
Lalb_Chr03g0026531 Lupinus albus HOM05D004998 ORTHO05D006104 5.7e-29 131.7 191 48.2
Medtr2g097480 Medicago truncatula HOM05D004998 ORTHO05D006104 9.7e-29 131.0 182 50.0
Lsat_1_v5_gn_9_23841 Lactuca sativa HOM05D004998 ORTHO05D006104 2.2e-28 129.8 188 48.9
HanXRQChr12g0374241 Helianthus annuus HOM05D004998 ORTHO05D006104 3.7e-28 129.0 182 46.2
MELO3C025903.2 Cucumis melo HOM05D004998 ORTHO05D006104 4.8e-28 128.6 188 45.2
Peaxi162Scf00122g01415 Petunia axillaris HOM05D004998 ORTHO05D006104 8.2e-28 127.9 192 45.3
Ah.08g219770 Amaranthus hybridus HOM05D004998 ORTHO05D006104 2.4e-27 126.3 196 45.4
CANSAT54G1321 Cannabis sativa HOM05D004998 ORTHO05D006104 3.1e-27 125.9 185 48.6
Aqoxy1G00915 Aquilegia oxysepala HOM05D004998 ORTHO05D006104 5.3e-27 125.2 189 46.0
Thhalv10014846m.g Eutrema salsugineum HOM05D004998 ORTHO05D006104 9.1e-27 124.4 184 46.2
CARHR285830 Cardamine hirsuta HOM05D004998 ORTHO05D006104 1.2e-26 124.0 183 45.4
C03p13690 Brassica napus HOM05D004998 ORTHO05D006104 1.6e-26 123.6 184 46.7
Psat5g285160 Pisum sativum HOM05D004998 ORTHO05D006104 1.6e-26 123.6 178 48.3
AL8G35930 Arabidopsis lyrata HOM05D004998 ORTHO05D006104 5.9e-26 121.7 183 46.4
Carub.0008s2013 Capsella rubella HOM05D004998 ORTHO05D006104 7.7e-26 121.3 183 45.9
Gohir.D03G123600 Gossypium hirsutum HOM05D004998 ORTHO05D006104 1.3e-25 120.6 170 50.0
Sp6g21150 Schrenkiella parvula HOM05D004998 ORTHO05D006104 3.8e-25 119.0 183 44.8
Os01g0144600 Oryza sativa ssp. japonica HOM05D004998 ORTHO05D006104 5.0e-25 118.6 198 41.4
ATR0559G067 Amborella trichopoda HOM05D004998 ORTHO05D006104 6.5e-25 118.2 185 42.7
AT5G59460 Arabidopsis thaliana HOM05D004998 ORTHO05D006104 1.9e-24 116.7 183 44.8
TPR.G5593 Trifolium pratense HOM05D004998 ORTHO05D006104 1.9e-24 116.7 183 46.4
ECA247G2861 Erigeron canadensis HOM05D004998 ORTHO05D006104 3.2e-24 115.9 190 44.2
Gorai.003G130300 Gossypium raimondii HOM05D004998 ORTHO05D006104 3.2e-24 115.9 170 48.8
Gohir.A03G043800 Gossypium hirsutum HOM05D004998 ORTHO05D006104 9.4e-24 114.4 170 48.8
HPP92_006623 Vanilla planifolia HOM05D004998 ORTHO05D006104 4.7e-23 112.1 225 40.4
Sed0008555 Sechium edule HOM05D004998 ORTHO05D006104 8.0e-23 111.3 187 44.4
Haze_24126 Corylus avellana HOM05D004998 ORTHO05D006104 3.0e-22 109.4 100 60.0
A02p07120 Brassica napus HOM05D004998 ORTHO05D006104 5.2e-22 108.6 182 42.3
Nitab4.5_0007132g0030 Nicotiana tabacum HOM05D004998 ORTHO05D006104 5.2e-22 108.6 178 45.5
BcaC03g14012 Brassica carinata HOM05D004998 ORTHO05D006104 6.7e-22 108.2 182 43.4
C02p12480 Brassica napus HOM05D004998 ORTHO05D006104 6.7e-22 108.2 182 43.4
BolC2t07348H Brassica oleracea HOM05D004998 ORTHO05D006104 6.7e-22 108.2 182 43.4
Nitab4.5_0006945g0010 Nicotiana tabacum HOM05D004998 ORTHO05D006104 1.2e-21 107.5 191 43.5
BcaB08g36256 Brassica carinata HOM05D004998 ORTHO05D006104 1.5e-21 107.1 184 41.8
CDE02G2808 Ceratophyllum demersum HOM05D004998 ORTHO05D006104 1.5e-21 107.1 186 41.4
BraA02t05793Z Brassica rapa HOM05D004998 ORTHO05D006104 2.0e-21 106.7 182 42.3
Aa31LG4G15620 Aethionema arabicum HOM05D004998 ORTHO05D006104 2.6e-21 106.3 187 42.2
PSO339G2709 Papaver somniferum HOM05D004998 ORTHO05D006104 7.5e-21 104.8 190 42.1
BcaB05g22508 Brassica carinata HOM05D004998 ORTHO05D006104 2.8e-20 102.8 183 39.3
Thhalv10002686m.g Eutrema salsugineum HOM05D004998 ORTHO05D006104 1.8e-19 100.1 190 41.6
Dinv06259 Davidia involucrata HOM05D004998 ORTHO05D006104 3.1e-19 99.4 104 53.8
Cpa.g.sc81.121 Carica papaya HOM05D004998 ORTHO05D006104 1.3e-17 94.0 77 62.3
Sc12g0001370 Simmondsia chinensis HOM05D004998 ORTHO05D006104 1.3e-17 94.0 135 48.1
Aa31LG1G11810 Aethionema arabicum HOM05D000959 ORTHO05D000775 2.2e-17 93.2 173 39.3
CDE08G1537 Ceratophyllum demersum HOM05D004998 ORTHO05D006104 1.5e-16 90.5 156 41.7
BraA10t43749Z Brassica rapa HOM05D004998 ORTHO05D006104 1.9e-16 90.1 184 39.1
A10p16680 Brassica napus HOM05D004998 ORTHO05D006104 5.5e-16 88.6 184 38.6
C09p51870 Brassica napus HOM05D004998 ORTHO05D006104 7.2e-16 88.2 150 42.7
Zm00001eb124480 Zea mays HOM05D004998 ORTHO05D006104 4.7e-15 85.5 84 56.0
BolC3t13819H Brassica oleracea HOM05D004998 ORTHO05D006104 1.4e-14 84.0 147 41.5
FAN11G1834 Fragaria x ananassa HOM05D004998 ORTHO05D006104 1.3e-12 77.4 176 39.2
FvH4_3g41460 Fragaria vesca HOM05D004998 ORTHO05D006104 2.8e-12 76.3 176 38.6
FAN25G2664 Fragaria x ananassa HOM05D004998 ORTHO05D006104 6.3e-12 75.1 117 43.6
BolC9t58049H Brassica oleracea HOM05D004998 ORTHO05D006104 5.4e-11 72.0 134 41.0
C03p13710 Brassica napus HOM05D004998 ORTHO05D006104 4.5e-10 68.9 134 38.1
BcaC04g19766 Brassica carinata HOM05D004998 ORTHO05D006104 5.9e-10 68.6 192 34.9
FAN21G1361 Fragaria x ananassa HOM05D004998 ORTHO05D006104 5.9e-10 68.6 170 35.9
unitig_37.g12674 Utricularia gibba HOM05D004998 ORTHO05D006104 5.9e-10 68.6 139 41.0
SEGI_30466 Sequoiadendron giganteum HOM05D004998 ORTHO05D006104 7.7e-10 68.2 140 37.9
BcaB01g04577 Brassica carinata HOM05D004998 ORTHO05D006104 1.3e-09 67.4 186 33.9
CSS0021101 Camellia sinensis var. sinensis HOM05D004998 ORTHO05D006104 1.3e-09 67.4 61 62.3
BcaB08g36255 Brassica carinata HOM05D004998 ORTHO05D006104 4.2e-08 62.4 189 33.3
Lalb_Chr01g0003571 Lupinus albus HOM05D004998 ORTHO05D006104 5.5e-08 62.0 133 38.3
Mapoly0094s0023 Marchantia polymorpha HOM05D004998 ORTHO05D006104 9.5e-08 61.2 110 38.2
Oeu002429.1 Olea europaea HOM05D004998 ORTHO05D006104 1.2e-07 60.8 55 61.8
BcaC01g06521 Brassica carinata HOM05D004998 ORTHO05D006104 2.1e-07 60.1 122 38.5
Pp3c16_15780 Physcomitrium patens HOM05D004998 ORTHO05D006104 1.8e-06 57.0 197 27.4


User provided reference genes

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