Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold417G51257 Striga asiatica HOM05D006141 ORTHO05D007670 5.9e-107 391.0 209 100.0
Migut.D00015 Erythranthe guttata HOM05D006141 ORTHO05D007670 7.3e-65 251.1 209 68.4
MSTRG.21729 Avicennia marina HOM05D006141 ORTHO05D007670 9.5e-65 250.8 216 66.7
Sopen01g030090 Solanum pennellii HOM05D006141 ORTHO05D007670 1.5e-62 243.4 233 59.2
Solyc01g068150.3 Solanum lycopersicum HOM05D006141 ORTHO05D007670 2.6e-62 242.7 223 60.5
Phvul.001G218100 Phaseolus vulgaris HOM05D006141 ORTHO05D007670 9.8e-62 240.7 212 64.2
DCAR_012301 Daucus carota HOM05D006141 ORTHO05D007670 1.3e-61 240.4 218 63.3
Thecc.01G324800 Theobroma cacao HOM05D006141 ORTHO05D007670 2.9e-61 239.2 215 66.0
VMungo1383G2247 Vigna mungo HOM05D006141 ORTHO05D007670 6.4e-61 238.0 212 63.7
Gohir.A08G036900 Gossypium hirsutum HOM05D006141 ORTHO05D007670 3.2e-60 235.7 209 67.0
Duzib138G1179 Durio zibethinus HOM05D006141 ORTHO05D007670 4.1e-60 235.3 215 66.0
Nitab4.5_0000222g0340 Nicotiana tabacum HOM05D006141 ORTHO05D007670 5.4e-60 235.0 232 58.6
Glyma.19G221200 Glycine max HOM05D006141 ORTHO05D007670 9.2e-60 234.2 217 61.8
Gohir.D08G047500 Gossypium hirsutum HOM05D006141 ORTHO05D007670 9.2e-60 234.2 209 66.0
Nn4g25355 Nelumbo nucifera HOM05D006141 ORTHO05D007670 3.5e-59 232.3 210 64.3
TAR362G0148 Trochodendron aralioides HOM05D006141 ORTHO05D007670 3.5e-59 232.3 204 64.7
Glyma.03G224200 Glycine max HOM05D006141 ORTHO05D007670 6.0e-59 231.5 217 62.7
Gorai.004G046700 Gossypium raimondii HOM05D006141 ORTHO05D007670 6.0e-59 231.5 209 65.6
SalBow6G5482 Salvia bowleyana HOM05D006141 ORTHO05D007670 6.0e-59 231.5 207 63.3
QL12p034897 Quercus lobata HOM05D006141 ORTHO05D007670 1.3e-58 230.3 213 60.6
Cfa004908 Carpinus fangiana HOM05D006141 ORTHO05D007670 5.1e-58 228.4 217 61.3
CiPaw.08G082900 Carya illinoinensis HOM05D006141 ORTHO05D007670 1.1e-57 227.3 210 62.4
TPR.G2465 Trifolium pratense HOM05D006141 ORTHO05D007670 1.1e-57 227.3 217 60.4
Medtr7g110620 Medicago truncatula HOM05D006141 ORTHO05D007670 3.3e-57 225.7 217 59.0
Cc01_g21800 Coffea canephora HOM05D006141 ORTHO05D007670 4.3e-57 225.3 215 61.9
Psat3g016880 Pisum sativum HOM05D006141 ORTHO05D007670 5.6e-57 224.9 217 59.4
COL.COLO4_23134 Corchorus olitorius HOM05D006141 ORTHO05D007670 1.2e-56 223.8 217 60.8
CANSAT25G1526 Cannabis sativa HOM05D006141 ORTHO05D007670 2.1e-56 223.0 218 60.1
Aqoxy2G02498 Aquilegia oxysepala HOM05D006141 ORTHO05D007670 2.8e-56 222.6 211 64.0
Actinidia20966 Actinidia chinensis HOM05D006141 ORTHO05D007670 3.6e-56 222.2 215 60.9
Rhsim01G0000200 Rhododendron simsii HOM05D006141 ORTHO05D007670 4.7e-56 221.9 221 61.1
Atru.chr5.866 Acer truncatum HOM05D006141 ORTHO05D007670 8.1e-56 221.1 216 61.1
PGR042G1406 Punica granatum HOM05D006141 ORTHO05D007670 1.1e-55 220.7 215 60.0
Ciclev10022224m.g Citrus clementina HOM05D006141 ORTHO05D007670 1.4e-55 220.3 214 60.3
Potri.014G112900 Populus trichocarpa HOM05D006141 ORTHO05D007670 1.8e-55 219.9 211 61.6
GSVIVG01028253001 Vitis vinifera HOM05D006141 ORTHO05D007670 3.1e-55 219.2 210 60.5
Lalb_Chr18g0046401 Lupinus albus HOM05D006141 ORTHO05D007670 4.0e-55 218.8 211 60.7
Manes.01G234600 Manihot esculenta HOM05D006141 ORTHO05D007670 5.2e-55 218.4 211 62.1
ClCG01G007160 Citrullus lanatus HOM05D006141 ORTHO05D007670 1.2e-54 217.2 216 59.7
MELO3C005194.2 Cucumis melo HOM05D006141 ORTHO05D007670 1.2e-54 217.2 222 58.6
Ca_09244_v3 Cicer arietinum L. HOM05D006141 ORTHO05D007670 1.5e-54 216.9 215 57.7
MBI18_g10378_MAGBIO Magnolia biondii HOM05D006141 ORTHO05D007670 1.5e-54 216.9 214 60.7
CSS0000718 Camellia sinensis var. sinensis HOM05D006141 ORTHO05D007670 2.0e-54 216.5 175 69.1
arahy.Tifrunner.gnm1.ann1.XETR8R Arachis hypogaea HOM05D006141 ORTHO05D007670 3.4e-54 215.7 235 55.7
arahy.Tifrunner.gnm1.ann1.YFT3VK Arachis hypogaea HOM05D006141 ORTHO05D007670 3.4e-54 215.7 235 54.0
Hma1.2p1_0408F.1_g146310 Hydrangea macrophylla HOM05D006141 ORTHO05D007670 5.8e-54 214.9 217 61.3
MD17G1284800 Malus domestica HOM05D006141 ORTHO05D007670 5.8e-54 214.9 217 58.1
Prupe.3G003000 Prunus persica HOM05D006141 ORTHO05D007670 5.8e-54 214.9 217 59.4
arahy.Tifrunner.gnm1.ann1.3ZI6V8 Arachis hypogaea HOM05D006141 ORTHO05D007670 7.5e-54 214.5 235 54.0
TWI59G0338 Tripterygium wilfordii HOM05D006141 ORTHO05D007670 9.9e-54 214.2 213 58.2
CsaV3_5G018600 Cucumis sativus L. HOM05D006141 ORTHO05D007670 1.7e-53 213.4 217 59.9
Sabra14G0083000 Salix brachista HOM05D006141 ORTHO05D007670 2.2e-53 213.0 210 61.4
THA.LOC104817433 Tarenaya hassleriana HOM05D006141 ORTHO05D007670 2.2e-53 213.0 205 59.0
AL5G44810 Arabidopsis lyrata HOM05D006141 ORTHO05D007670 1.1e-52 210.7 220 59.1
AT3G62140 Arabidopsis thaliana HOM05D006141 ORTHO05D007670 3.2e-52 209.1 217 56.7
CDE09G0801 Ceratophyllum demersum HOM05D006141 ORTHO05D007670 3.2e-52 209.1 206 58.3
unitig_578.g16642 Utricularia gibba HOM05D006141 ORTHO05D007670 4.1e-52 208.8 209 58.9
Dinv33165 Davidia involucrata HOM05D006141 ORTHO05D007670 7.1e-52 208.0 207 58.9
HanXRQChr06g0167971 Helianthus annuus HOM05D006141 ORTHO05D007670 7.1e-52 208.0 207 59.4
Sed0006054 Sechium edule HOM05D006141 ORTHO05D007670 9.2e-52 207.6 208 59.6
FAN19G0972 Fragaria x ananassa HOM05D006141 ORTHO05D007670 1.2e-51 207.2 219 55.7
RcHm_v2.0_Chr3g0485921 Rosa chinensis HOM05D006141 ORTHO05D007670 1.2e-51 207.2 219 56.2
AUR62004945 Chenopodium quinoa HOM05D006141 ORTHO05D007670 2.7e-51 206.1 226 53.5
PSO210G0852 Papaver somniferum HOM05D006141 ORTHO05D007670 2.7e-51 206.1 212 59.0
Thhalv10006233m.g Eutrema salsugineum HOM05D006141 ORTHO05D007670 3.5e-51 205.7 216 55.6
FAN23G3136 Fragaria x ananassa HOM05D006141 ORTHO05D007670 3.5e-51 205.7 219 56.2
Peaxi162Scf00309g01021 Petunia axillaris HOM05D006141 ORTHO05D007670 3.5e-51 205.7 232 53.4
FAN28G2755 Fragaria x ananassa HOM05D006141 ORTHO05D007670 6.0e-51 204.9 219 56.2
Carub.0005s2889 Capsella rubella HOM05D006141 ORTHO05D007670 7.8e-51 204.5 218 57.8
FvH4_1g26260 Fragaria vesca HOM05D006141 ORTHO05D007670 2.3e-50 203.0 219 56.2
HPP92_018284 Vanilla planifolia HOM05D006141 ORTHO05D007670 3.0e-50 202.6 211 56.9
PSO761G0605 Papaver somniferum HOM05D006141 ORTHO05D007670 3.9e-50 202.2 212 58.0
AUR62001013 Chenopodium quinoa HOM05D006141 ORTHO05D007670 8.6e-50 201.1 226 51.8
ECA236G4451 Erigeron canadensis HOM05D006141 ORTHO05D007670 1.1e-49 200.7 210 59.0
Sp5g01230 Schrenkiella parvula HOM05D006141 ORTHO05D007670 1.9e-49 199.9 215 55.3
Aa31LG10G16170 Aethionema arabicum HOM05D006141 ORTHO05D007670 3.3e-49 199.1 207 58.0
EL10Ac6g14128 Beta vulgaris HOM05D006141 ORTHO05D007670 7.3e-49 198.0 223 54.7
CARHR172480 Cardamine hirsuta HOM05D006141 ORTHO05D007670 9.5e-49 197.6 211 55.5
ATR0796G189 Amborella trichopoda HOM05D006141 ORTHO05D007670 2.1e-48 196.4 202 56.4
C06p28110 Brassica napus HOM05D006141 ORTHO05D007670 1.1e-47 194.1 205 56.1
BolC6t37977H Brassica oleracea HOM05D006141 ORTHO05D007670 1.1e-47 194.1 205 56.1
FAN26G1012 Fragaria x ananassa HOM05D006141 ORTHO05D007670 3.1e-47 192.6 240 50.4
C08p37090 Brassica napus HOM05D006141 ORTHO05D007670 1.2e-46 190.7 209 56.5
BolC8t51287H Brassica oleracea HOM05D006141 ORTHO05D007670 1.2e-46 190.7 209 56.5
BcaC07g40706 Brassica carinata HOM05D006141 ORTHO05D007670 2.6e-46 189.5 215 56.3
A09p54230 Brassica napus HOM05D006141 ORTHO05D007670 1.7e-45 186.8 207 54.6
BraA09t40835Z Brassica rapa HOM05D006141 ORTHO05D007670 1.7e-45 186.8 207 54.6
Cpa.g.sc57.10 Carica papaya HOM05D006141 ORTHO05D007670 1.1e-44 184.1 130 75.4
Lsat_1_v5_gn_8_167241 Lactuca sativa HOM05D006141 ORTHO05D007670 1.1e-44 184.1 206 56.3
A07p25870 Brassica napus HOM05D006141 ORTHO05D007670 2.4e-44 183.0 211 54.0
Ah.11g045950 Amaranthus hybridus HOM05D006141 ORTHO05D007670 3.2e-44 182.6 220 53.6
BcaB02g07358 Brassica carinata HOM05D002572 ORTHO05D002800 4.2e-44 182.2 210 53.3
SEGI_07518 Sequoiadendron giganteum HOM05D006141 ORTHO05D007670 1.2e-43 180.6 213 50.2
Os01g0321800 Oryza sativa ssp. japonica HOM05D006141 ORTHO05D007670 4.6e-43 178.7 209 53.6
Hma1.2p1_0408F.1_g146320 Hydrangea macrophylla HOM05D006141 ORTHO05D007670 1.7e-42 176.8 116 81.9
Rhsim01G0080900 Rhododendron simsii HOM05D006141 ORTHO05D007670 9.6e-41 171.0 162 60.5
CAN.G100.55 Capsicum annuum HOM05D006141 ORTHO05D007670 1.2e-38 164.1 122 73.0
BcaC08g45187 Brassica carinata HOM05D006141 ORTHO05D007670 2.6e-38 162.9 125 69.6
Zm00001eb340460 Zea mays HOM05D006141 ORTHO05D007670 9.9e-38 161.0 131 67.9
Rhsim01G0085900 Rhododendron simsii HOM05D006141 ORTHO05D007670 3.8e-37 159.1 208 49.0
BcaB02g07360 Brassica carinata HOM05D006141 ORTHO05D007670 3.8e-29 132.5 93 72.0
BraA07t30234Z Brassica rapa HOM05D006141 ORTHO05D007670 1.1e-28 131.0 90 72.2
Rhsim01G0086800 Rhododendron simsii HOM05D006141 ORTHO05D007670 4.2e-28 129.0 209 44.0
Lj1g0014608 Lotus japonicus HOM05D006141 ORTHO05D007670 5.4e-28 128.6 219 42.5
Lj2A1216T56 Lonicera japonica HOM05D006141 ORTHO05D007670 9.3e-28 127.9 87 75.9
Ciclev10030079m.g Citrus clementina HOM05D006141 ORTHO05D007670 1.9e-25 120.2 155 48.4
Ciclev10030249m.g Citrus clementina HOM05D006141 ORTHO05D007670 4.3e-25 119.0 155 48.4
Mapoly0026s0067 Marchantia polymorpha HOM05D006141 ORTHO05D007670 1.3e-24 117.5 214 39.7
Ciclev10030010m.g Citrus clementina HOM05D006141 ORTHO05D007670 6.2e-24 115.2 209 40.2
Pp3c2_35190 Physcomitrium patens HOM05D006141 ORTHO05D007670 1.8e-23 113.6 206 39.3
Rhsim01G0082900 Rhododendron simsii HOM05D006141 ORTHO05D007670 6.2e-16 88.6 155 40.0
SHI33165 Sapria himalayana HOM05D006141 ORTHO05D007670 9.0e-15 84.7 131 42.0
Nitab4.5_0008976g0040 Nicotiana tabacum HOM05D006141 ORTHO05D007670 1.2e-14 84.3 132 44.7
Rhsim12G0140700 Rhododendron simsii HOM05D006141 ORTHO05D007670 3.4e-14 82.8 153 43.8
Haze_05144 Corylus avellana HOM05D006141 ORTHO05D007670 3.8e-13 79.3 213 31.0
Rhsim01G0081900 Rhododendron simsii HOM05D006141 ORTHO05D007670 4.2e-12 75.9 46 82.6
AagrBONN_evm.TU.Sc2ySwM_368.766 Anthoceros agrestis HOM05D006141 ORTHO05D007670 5.5e-12 75.5 142 35.9
DCAR_012300 Daucus carota HOM05D006141 ORTHO05D007670 1.2e-11 74.3 46 73.9
CBR_g57079 Chara braunii HOM05D006141 ORTHO05D007670 1.6e-11 73.9 128 43.8
FAN03G1225 Fragaria x ananassa HOM05D006141 ORTHO05D007670 2.3e-10 70.1 49 71.4
BcaC09g48717 Brassica carinata HOM05D001214 ORTHO05D001029 1.9e-09 67.0 50 68.0
Rhsim01G0083000 Rhododendron simsii HOM05D006141 ORTHO05D007670 2.8e-08 63.2 93 45.2


User provided reference genes

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