Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold417G51248 Striga asiatica HOM05D005434 ORTHO05D006412 0.0e+00 1820.1 931 100.0
SGA_v2.0_scaffold310G48189 Striga asiatica HOM05D005434 ORTHO05D006412 1.9e-253 879.8 863 60.1
Migut.D00008 Erythranthe guttata HOM05D005434 ORTHO05D006412 1.6e-204 717.2 873 49.9
Oeu052591.1 Olea europaea HOM05D005434 ORTHO05D006412 1.8e-94 351.7 697 39.0
Dinv12078 Davidia involucrata HOM05D005434 ORTHO05D006412 8.5e-65 253.1 742 31.8
QL12p035062 Quercus lobata HOM05D005434 ORTHO05D006412 1.2e-63 249.2 880 29.5
Actinidia20964 Actinidia chinensis HOM05D005434 ORTHO05D006412 1.4e-59 235.7 882 29.9
Solyc01g079080.3 Solanum lycopersicum HOM05D005434 ORTHO05D006412 1.7e-57 228.8 901 27.6
Sopen01g030590 Solanum pennellii HOM05D005434 ORTHO05D006412 8.6e-57 226.5 901 27.7
PGSC0003DMG400001122 Solanum tuberosum HOM05D005434 ORTHO05D006412 8.6e-57 226.5 915 27.1
Potri.002G186200 Populus trichocarpa HOM05D005434 ORTHO05D006412 3.2e-56 224.6 947 27.6
Cc01_g21750 Coffea canephora HOM05D005434 ORTHO05D006412 8.8e-54 216.5 899 29.0
Peaxi162Scf00309g00625 Petunia axillaris HOM05D005434 ORTHO05D006412 1.5e-53 215.7 918 26.9
CAN.G179.30 Capsicum annuum HOM05D005434 ORTHO05D006412 4.9e-52 210.7 905 27.5
Thecc.01G326300 Theobroma cacao HOM05D005434 ORTHO05D006412 1.4e-51 209.1 889 27.7
Manes.05G008100 Manihot esculenta HOM05D005434 ORTHO05D006412 3.5e-50 204.5 922 27.2
Nitab4.5_0000222g0380 Nicotiana tabacum HOM05D005434 ORTHO05D006412 1.0e-49 203.0 918 26.8
Atru.chr5.851 Acer truncatum HOM05D005434 ORTHO05D006412 1.7e-49 202.2 908 27.0
MD09G1291300 Malus domestica HOM05D005434 ORTHO05D006412 3.8e-49 201.1 926 27.8
Rhsim02G0256300 Rhododendron simsii HOM05D005434 ORTHO05D006412 1.5e-48 199.1 870 28.9
Potri.014G111500 Populus trichocarpa HOM05D005434 ORTHO05D006412 5.6e-48 197.2 949 26.3
Phvul.007G208600 Phaseolus vulgaris HOM05D005434 ORTHO05D006412 2.1e-47 195.3 905 26.6
TAR636G0087 Trochodendron aralioides HOM05D005434 ORTHO05D006412 3.6e-47 194.5 896 26.9
RcHm_v2.0_Chr3g0485651 Rosa chinensis HOM05D005434 ORTHO05D006412 1.4e-46 192.6 912 26.8
Glyma.02G007100 Glycine max HOM05D005434 ORTHO05D006412 8.9e-46 189.9 900 27.6
Lj5g0001301 Lotus japonicus HOM05D005434 ORTHO05D006412 4.4e-45 187.6 919 27.4
ClCG02G017720 Citrullus lanatus HOM05D005434 ORTHO05D006412 5.7e-45 187.2 891 27.3
Duzib138G0614 Durio zibethinus HOM05D005434 ORTHO05D006412 2.9e-44 184.9 905 27.4
VMungo0720G1215 Vigna mungo HOM05D005434 ORTHO05D006412 4.1e-43 181.0 803 27.4
Glyma.10G138700 Glycine max HOM05D005434 ORTHO05D006412 7.0e-43 180.3 927 26.5
COL.COLO4_23119 Corchorus olitorius HOM05D005434 ORTHO05D006412 1.6e-42 179.1 893 26.0
CiPaw.08G081800 Carya illinoinensis HOM05D005434 ORTHO05D006412 2.7e-42 178.3 897 27.1
TPR.G3083 Trifolium pratense HOM05D005434 ORTHO05D006412 3.5e-42 177.9 879 26.7
Duzib133G0025 Durio zibethinus HOM05D005434 ORTHO05D006412 5.9e-42 177.2 872 27.2
Gorai.001G148200 Gossypium raimondii HOM05D005434 ORTHO05D006412 5.0e-41 174.1 897 25.8
Psat6g158560 Pisum sativum HOM05D005434 ORTHO05D006412 8.6e-41 173.3 882 26.4
arahy.Tifrunner.gnm1.ann1.G6BN46 Arachis hypogaea HOM05D005434 ORTHO05D006412 1.1e-40 172.9 899 26.0
Nitab4.5_0003092g0060 Nicotiana tabacum HOM05D005434 ORTHO05D006412 1.1e-40 172.9 949 25.2
TAR365G0925 Trochodendron aralioides HOM05D005434 ORTHO05D006412 1.2e-39 169.5 894 26.6
Ca_10237_v3 Cicer arietinum L. HOM05D005434 ORTHO05D006412 2.1e-39 168.7 698 27.8
Haze_05156 Corylus avellana HOM05D005434 ORTHO05D006412 2.8e-39 168.3 867 26.0
Gohir.A07G131800 Gossypium hirsutum HOM05D005434 ORTHO05D006412 2.8e-39 168.3 878 25.4
DCAR_002941 Daucus carota HOM05D005434 ORTHO05D006412 3.6e-39 167.9 885 26.2
MD17G1286100 Malus domestica HOM05D005434 ORTHO05D006412 3.6e-39 167.9 912 25.8
Sabra14G0081900 Salix brachista HOM05D005434 ORTHO05D006412 3.6e-39 167.9 927 25.9
DCAR_005712 Daucus carota HOM05D005434 ORTHO05D006412 6.2e-39 167.2 962 26.3
FAN28G1136 Fragaria x ananassa HOM05D005434 ORTHO05D006412 8.0e-39 166.8 919 25.6
FvH4_1g26160 Fragaria vesca HOM05D005434 ORTHO05D006412 1.1e-38 166.4 950 24.3
FAN23G2884 Fragaria x ananassa HOM05D005434 ORTHO05D006412 3.1e-38 164.9 921 24.3
Prupe.3G001600 Prunus persica HOM05D005434 ORTHO05D006412 1.5e-37 162.5 866 27.0
MELO3C013628.2 Cucumis melo HOM05D005434 ORTHO05D006412 2.6e-37 161.8 913 26.2
FAN19G2204 Fragaria x ananassa HOM05D005434 ORTHO05D006412 4.4e-37 161.0 950 24.2
Medtr1g085710 Medicago truncatula HOM05D005434 ORTHO05D006412 9.8e-37 159.8 889 26.0
Sed0005889 Sechium edule HOM05D005434 ORTHO05D006412 9.8e-37 159.8 934 25.4
AT2G46980 Arabidopsis thaliana HOM05D005434 ORTHO05D006412 1.7e-36 159.1 902 24.9
Eucgr.K00557 Eucalyptus grandis HOM05D005434 ORTHO05D006412 2.2e-36 158.7 905 24.8
CsaV3_6G012840 Cucumis sativus L. HOM05D005434 ORTHO05D006412 1.4e-35 156.0 921 24.5
Sed0026347 Sechium edule HOM05D005434 ORTHO05D006412 1.4e-35 156.0 897 25.2
Nn3g21972 Nelumbo nucifera HOM05D005434 ORTHO05D006412 1.9e-35 155.6 999 25.0
Sp4g28980 Schrenkiella parvula HOM05D005434 ORTHO05D006412 7.0e-35 153.7 891 25.3
FAN26G2209 Fragaria x ananassa HOM05D005434 ORTHO05D006412 9.2e-35 153.3 909 25.0
AL4G46460 Arabidopsis lyrata HOM05D005434 ORTHO05D006412 3.5e-34 151.4 890 23.8
PGR142G2929 Punica granatum HOM05D005434 ORTHO05D006412 6.0e-34 150.6 1024 24.2
ECA247G2130 Erigeron canadensis HOM05D005434 ORTHO05D008082 1.7e-33 149.1 899 24.9
Gohir.A11G105400 Gossypium hirsutum HOM05D005434 ORTHO05D006412 3.9e-33 147.9 965 25.2
Gohir.D11G110300 Gossypium hirsutum HOM05D005434 ORTHO05D006412 6.6e-33 147.1 959 24.9
Lsat_1_v5_gn_9_7120 Lactuca sativa HOM05D005434 ORTHO05D006412 2.5e-32 145.2 886 24.7
Aqoxy2G02439 Aquilegia oxysepala HOM05D005434 ORTHO05D006412 3.3e-32 144.8 915 23.8
CARHR142350 Cardamine hirsuta HOM05D005434 ORTHO05D006412 3.3e-32 144.8 893 23.7
Gorai.007G117900 Gossypium raimondii HOM05D005434 ORTHO05D006412 5.6e-32 144.1 963 24.9
Thhalv10001318m.g Eutrema salsugineum HOM05D005434 ORTHO05D006412 1.2e-31 142.9 906 24.9
Carub.0004s2971 Capsella rubella HOM05D005434 ORTHO05D006412 4.7e-31 141.0 889 24.4
CSS0010810 Camellia sinensis var. sinensis HOM05D005434 ORTHO05D006412 5.2e-30 137.5 591 30.5
Gohir.D07G136100 Gossypium hirsutum HOM05D005434 ORTHO05D006412 1.2e-29 136.3 726 26.4
BraA05t19085Z Brassica rapa HOM05D005434 ORTHO05D006412 2.0e-29 135.6 901 24.5
Aa31LG1G28350 Aethionema arabicum HOM05D005434 ORTHO05D006412 1.3e-28 132.9 891 24.2
CANSAT25G2989 Cannabis sativa HOM05D005434 ORTHO05D006412 1.3e-28 132.9 983 23.8
TWI14G0253 Tripterygium wilfordii HOM05D005434 ORTHO05D006412 2.9e-28 131.7 938 24.5
SHI34042 Sapria himalayana HOM05D005434 ORTHO05D006412 1.4e-27 129.4 893 25.1
Cpa.g.sc57.27 Carica papaya HOM05D005434 ORTHO05D006412 3.2e-27 128.3 777 25.9
AUR62011691 Chenopodium quinoa HOM05D005434 ORTHO05D006412 6.0e-26 124.0 871 24.3
Lj1A7G43 Lonicera japonica HOM05D005434 ORTHO05D006412 7.8e-26 123.6 246 33.7
unitig_62.g23901 Utricularia gibba HOM05D005434 ORTHO05D006412 3.0e-25 121.7 336 30.4
PSO210G4596 Papaver somniferum HOM05D005434 ORTHO05D006412 8.6e-25 120.2 739 24.9
Lalb_Chr02g0147201 Lupinus albus HOM05D005434 ORTHO05D006412 1.1e-24 119.8 273 31.5
C04p00990 Brassica napus HOM05D005434 ORTHO05D006412 1.9e-24 119.0 918 24.2
BcaC02g12619 Brassica carinata HOM05D005434 ORTHO05D006412 8.1e-23 113.6 706 24.5
MBI18_g03842_MAGBIO Magnolia biondii HOM05D005434 ORTHO05D006412 8.1e-23 113.6 911 24.1
BcaC02g12826 Brassica carinata HOM05D005434 ORTHO05D006412 1.8e-22 112.5 897 23.0
Lj1A7T44 Lonicera japonica HOM05D005434 ORTHO05D006412 6.8e-22 110.5 503 28.2
SGA_v2.0_scaffold80G25674 Striga asiatica HOM05D005434 ORTHO05D006412 2.6e-21 108.6 112 54.5
EL10Ac4g10377 Beta vulgaris HOM05D005434 ORTHO05D006412 1.3e-20 106.3 871 24.7
GSVIVG01028240001 Vitis vinifera HOM05D005434 ORTHO05D006412 6.4e-20 104.0 326 31.3
AUR62024551 Chenopodium quinoa HOM05D005434 ORTHO05D006412 8.4e-20 103.6 884 23.4
Sc17g0000070 Simmondsia chinensis HOM05D005434 ORTHO05D006412 1.9e-19 102.4 883 24.1
BolC4t21751H Brassica oleracea HOM05D005434 ORTHO05D006412 7.1e-19 100.5 906 22.5
GSVIVG01028239001 Vitis vinifera HOM05D005434 ORTHO05D006412 9.2e-19 100.1 220 32.3
unitig_62.g23900 Utricularia gibba HOM05D002367 ORTHO05D006412 3.5e-18 98.2 453 28.3
A05p00820 Brassica napus HOM05D005434 ORTHO05D006412 3.9e-17 94.7 850 24.0
Sc17g0000050 Simmondsia chinensis HOM05D005434 ORTHO05D006412 8.7e-17 93.6 246 30.5
Dinv33176 Davidia involucrata HOM05D005434 ORTHO05D006412 1.1e-16 93.2 427 28.6
Zm00001eb233800 Zea mays HOM05D005434 ORTHO05D006412 1.1e-16 93.2 748 23.3
CiPaw.07G126300 Carya illinoinensis HOM05D005434 ORTHO05D006412 8.1e-15 87.0 304 32.9
CiPaw.07G126400 Carya illinoinensis HOM05D005434 ORTHO05D006412 8.1e-15 87.0 90 48.9
MBI19_g04828_MAGBIO Magnolia biondii HOM05D005434 ORTHO05D006412 1.4e-14 86.3 930 23.1
Actinidia25873 Actinidia chinensis HOM05D005434 ORTHO05D006412 3.4e-13 81.6 612 26.1
Os10g0405500 Oryza sativa ssp. japonica HOM05D005434 ORTHO05D006412 4.9e-12 77.8 988 22.3
Ciclev10019510m.g Citrus clementina HOM05D005434 ORTHO05D006412 1.1e-11 76.6 560 25.5
Dinv33178 Davidia involucrata HOM05D005434 ORTHO05D006412 5.4e-11 74.3 189 31.7
arahy.Tifrunner.gnm1.ann1.9BA1LG Arachis hypogaea HOM05D005434 ORTHO05D006412 7.1e-11 73.9 647 24.1
TWI23G0760 Tripterygium wilfordii HOM05D005434 ORTHO05D006412 7.8e-10 70.5 557 26.4
unitig_52.g16899 Utricularia gibba HOM05D005434 ORTHO05D006412 8.7e-09 67.0 137 35.8
CDE02G0039 Ceratophyllum demersum HOM05D005434 ORTHO05D006412 1.1e-08 66.6 248 24.6
Dinv12077 Davidia involucrata HOM05D005434 ORTHO05D006412 4.8e-07 61.2 73 49.3
unitig_52.g16898 Utricularia gibba HOM05D002367 ORTHO05D002566 4.8e-07 61.2 261 30.3
BolC3t15425H Brassica oleracea HOM05D005434 ORTHO05D006412 1.1e-06 60.1 75 42.7
C03p30750 Brassica napus HOM05D005434 ORTHO05D011138 2.4e-06 58.9 75 44.0
Ciclev10023478m.g Citrus clementina HOM05D005434 ORTHO05D006412 4.0e-06 58.2 180 27.2


User provided reference genes

Program Settings