Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold417G51243 Striga asiatica HOM05D006579 ORTHO05D007783 1.4e-160 569.7 307 100.0
SalBow3G0048 Salvia bowleyana HOM05D006579 ORTHO05D007783 5.4e-93 345.1 307 67.1
Migut.D00005 Erythranthe guttata HOM05D006579 ORTHO05D007783 8.7e-91 337.8 314 66.6
Oeu038082.1 Olea europaea HOM05D006579 ORTHO05D007783 6.4e-86 321.6 313 63.6
Dinv33186 Davidia involucrata HOM05D006579 ORTHO05D007783 5.1e-83 312.0 313 61.0
Thecc.01G328000 Theobroma cacao HOM05D006579 ORTHO05D007783 4.3e-82 308.9 308 60.4
MSTRG.18055 Avicennia marina HOM05D006579 ORTHO05D007783 1.6e-81 307.0 309 62.1
Nn8g39570 Nelumbo nucifera HOM05D006579 ORTHO05D007783 1.6e-81 307.0 307 60.9
Nitab4.5_0001628g0050 Nicotiana tabacum HOM05D006579 ORTHO05D007783 1.6e-81 307.0 321 57.9
Nitab4.5_0002103g0080 Nicotiana tabacum HOM05D006579 ORTHO05D007783 1.4e-80 303.9 321 58.3
Cc06_g22680 Coffea canephora HOM05D006579 ORTHO05D007783 9.0e-80 301.2 313 59.1
Sopen01g030530 Solanum pennellii HOM05D006579 ORTHO05D007783 2.6e-79 299.7 320 58.4
Gohir.D11G111000 Gossypium hirsutum HOM05D006579 ORTHO05D007783 3.4e-79 299.3 307 58.6
Duzib138G1509 Durio zibethinus HOM05D006579 ORTHO05D007783 4.5e-79 298.9 309 58.9
Ciclev10021552m.g Citrus clementina HOM05D006579 ORTHO05D007783 5.8e-79 298.5 279 62.0
Gorai.007G118800 Gossypium raimondii HOM05D006579 ORTHO05D007783 5.8e-79 298.5 307 58.6
Potri.014G110200 Populus trichocarpa HOM05D006579 ORTHO05D007783 5.8e-79 298.5 306 58.2
Solyc01g068580.4 Solanum lycopersicum HOM05D006579 ORTHO05D007783 1.0e-78 297.7 320 58.1
COL.COLO4_23096 Corchorus olitorius HOM05D006579 ORTHO05D007783 2.9e-78 296.2 308 56.8
HanXRQChr01g0017841 Helianthus annuus HOM05D006579 ORTHO05D007783 1.1e-77 294.3 317 56.8
ATR0796G267 Amborella trichopoda HOM05D006579 ORTHO05D007783 2.5e-77 293.1 307 59.0
Gohir.A11G106100 Gossypium hirsutum HOM05D006579 ORTHO05D007783 9.3e-77 291.2 307 58.0
Manes.14G164500 Manihot esculenta HOM05D006579 ORTHO05D007783 9.3e-77 291.2 311 56.9
DCAR_018237 Daucus carota HOM05D006579 ORTHO05D007783 2.1e-76 290.0 314 60.8
PGR042G1939 Punica granatum HOM05D006579 ORTHO05D007783 2.1e-76 290.0 314 58.3
THA.LOC104825921 Tarenaya hassleriana HOM05D006579 ORTHO05D007783 2.1e-76 290.0 310 56.5
TAR362G0572 Trochodendron aralioides HOM05D006579 ORTHO05D007783 2.7e-76 289.7 309 57.9
CAN.G179.22 Capsicum annuum HOM05D006579 ORTHO05D007783 3.5e-76 289.3 316 57.6
Aqoxy2G02395 Aquilegia oxysepala HOM05D006579 ORTHO05D007783 1.0e-75 287.7 321 57.0
ECA248G0873 Erigeron canadensis HOM05D006579 ORTHO05D007783 1.8e-75 287.0 320 56.6
MBI15_g35678_MAGBIO Magnolia biondii HOM05D006579 ORTHO05D007783 3.0e-75 286.2 306 58.5
GSVIVG01028219001 Vitis vinifera HOM05D006579 ORTHO05D007783 3.0e-75 286.2 309 57.3
Hund07814 Selenicereus undatus HOM05D006579 ORTHO05D007783 9.6e-74 281.2 306 58.8
Sabra14G0081200 Salix brachista HOM05D006579 ORTHO05D007783 2.1e-73 280.0 337 52.8
Psat6g157680 Pisum sativum HOM05D006579 ORTHO05D007783 2.8e-73 279.6 314 55.1
Carub.0001s0137 Capsella rubella HOM05D006579 ORTHO05D007783 4.8e-73 278.9 310 55.8
Glyma.02G006400 Glycine max HOM05D006579 ORTHO05D007783 4.8e-73 278.9 313 55.3
MD17G1285900 Malus domestica HOM05D006579 ORTHO05D007783 6.3e-73 278.5 336 53.0
Atru.chr5.832 Acer truncatum HOM05D006579 ORTHO05D007783 1.1e-72 277.7 276 59.1
arahy.Tifrunner.gnm1.ann1.E1WP71 Arachis hypogaea HOM05D006579 ORTHO05D007783 2.4e-72 276.6 281 58.7
EL10Ac9g20927 Beta vulgaris HOM05D006579 ORTHO05D007783 2.4e-72 276.6 304 56.9
Cfa004929 Carpinus fangiana HOM05D006579 ORTHO05D007783 3.1e-72 276.2 325 52.6
Lj5g0006855 Lotus japonicus HOM05D006579 ORTHO05D007783 3.1e-72 276.2 317 55.5
CANSAT25G2874 Cannabis sativa HOM05D006579 ORTHO05D007783 5.3e-72 275.4 320 53.8
Phvul.007G207700 Phaseolus vulgaris HOM05D006579 ORTHO05D007783 6.9e-72 275.0 280 58.2
PGSC0003DMG400000840 Solanum tuberosum HOM05D006579 ORTHO05D007783 6.9e-72 275.0 356 51.7
Eucgr.A00989 Eucalyptus grandis HOM05D006579 ORTHO05D007783 9.0e-72 274.6 312 54.5
VMungo0720G0607 Vigna mungo HOM05D006579 ORTHO05D007783 9.0e-72 274.6 280 57.9
MELO3C005183.2 Cucumis melo HOM05D006579 ORTHO05D007783 1.5e-71 273.9 334 53.0
arahy.Tifrunner.gnm1.ann1.3317JQ Arachis hypogaea HOM05D006579 ORTHO05D007783 2.0e-71 273.5 281 58.4
Medtr1g085470 Medicago truncatula HOM05D006579 ORTHO05D007783 2.0e-71 273.5 279 58.8
TPR.G3075 Trifolium pratense HOM05D006579 ORTHO05D007783 2.0e-71 273.5 315 55.2
CiPaw.07G127500 Carya illinoinensis HOM05D006579 ORTHO05D007783 3.4e-71 272.7 330 52.1
CARHR001640 Cardamine hirsuta HOM05D006579 ORTHO05D007783 4.5e-71 272.3 311 55.0
Prupe.3G000500 Prunus persica HOM05D006579 ORTHO05D007783 4.5e-71 272.3 331 52.9
TWI23G0058 Tripterygium wilfordii HOM05D006579 ORTHO05D007783 4.5e-71 272.3 312 55.1
Lalb_Chr21g0309921 Lupinus albus HOM05D006579 ORTHO05D007783 5.9e-71 271.9 313 54.0
Glyma.10G140000 Glycine max HOM05D006579 ORTHO05D007783 7.6e-71 271.6 280 57.9
Ca_10226_v3 Cicer arietinum L. HOM05D006579 ORTHO05D007783 1.0e-70 271.2 310 53.9
HPP92_026046 Vanilla planifolia HOM05D006579 ORTHO05D007783 2.9e-70 269.6 307 56.0
Lsat_1_v5_gn_1_78561 Lactuca sativa HOM05D006579 ORTHO05D007783 3.8e-70 269.2 305 55.1
Peaxi162Scf00309g00059 Petunia axillaris HOM05D006579 ORTHO05D007783 3.8e-70 269.2 241 64.7
Lalb_Chr06g0167181 Lupinus albus HOM05D006579 ORTHO05D007783 6.5e-70 268.5 314 53.8
Thhalv10008452m.g Eutrema salsugineum HOM05D006579 ORTHO05D007783 1.4e-69 267.3 309 54.7
Cpa.g.sc57.48 Carica papaya HOM05D006579 ORTHO05D007783 3.2e-69 266.2 311 54.7
QL09p037462 Quercus lobata HOM05D006579 ORTHO05D007783 5.5e-69 265.4 299 54.2
Sp1g01410 Schrenkiella parvula HOM05D006579 ORTHO05D007783 5.5e-69 265.4 280 55.7
PSO761G0510 Papaver somniferum HOM05D006579 ORTHO05D007783 9.3e-69 264.6 279 56.6
PSO210G5405 Papaver somniferum HOM05D006579 ORTHO05D007783 1.2e-68 264.2 279 56.6
AL1G11660 Arabidopsis lyrata HOM05D006579 ORTHO05D007783 2.1e-68 263.5 311 53.4
BraA10t42384Z Brassica rapa HOM05D006579 ORTHO05D007783 2.1e-68 263.5 311 53.1
CSS0004948 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 2.1e-68 263.5 317 53.9
Aa31LG1G10170 Aethionema arabicum HOM05D006579 ORTHO05D007783 2.7e-68 263.1 310 53.2
BcaC05g24612 Brassica carinata HOM05D006579 ORTHO05D007783 4.6e-68 262.3 309 52.8
C05p01100 Brassica napus HOM05D006579 ORTHO05D007783 4.6e-68 262.3 309 52.8
Sc12g0008270 Simmondsia chinensis HOM05D006579 ORTHO05D007783 7.9e-68 261.5 306 53.6
AT1G02330 Arabidopsis thaliana HOM05D006579 ORTHO05D007783 1.3e-67 260.8 312 53.2
BolC5t28891H Brassica oleracea HOM05D006579 ORTHO05D007783 1.8e-67 260.4 309 52.4
CsaV3_5G018690 Cucumis sativus L. HOM05D006579 ORTHO05D007783 1.8e-67 260.4 335 50.7
ClCG01G007260 Citrullus lanatus HOM05D006579 ORTHO05D007783 3.9e-67 259.2 338 51.5
FvH4_1g26040 Fragaria vesca HOM05D006579 ORTHO05D007783 1.5e-66 257.3 312 52.9
FAN19G0998 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.5e-66 257.3 312 52.9
FAN26G1368 Fragaria x ananassa HOM05D006579 ORTHO05D007783 3.3e-66 256.1 312 53.8
RcHm_v2.0_Chr3g0485501 Rosa chinensis HOM05D006579 ORTHO05D007783 1.3e-65 254.2 329 50.8
Sed0009510 Sechium edule HOM05D006579 ORTHO05D007783 1.3e-65 254.2 325 49.8
FAN28G1483 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.1e-64 251.1 309 52.8
AUR62037602 Chenopodium quinoa HOM05D006579 ORTHO05D007783 2.4e-64 250.0 304 53.0
Os03g0374100 Oryza sativa ssp. japonica HOM05D006579 ORTHO05D007783 7.7e-63 245.0 308 50.0
FAN23G1885 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.0e-62 244.6 313 51.8
FAN23G2819 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.0e-62 244.6 313 51.8
Actinidia21333 Actinidia chinensis HOM05D006579 ORTHO05D007783 2.2e-62 243.4 292 53.8
unitig_747.g21528 Utricularia gibba HOM05D006579 ORTHO05D007783 8.5e-62 241.5 315 54.3
Pp3c6_17910 Physcomitrium patens HOM05D006579 ORTHO05D007783 7.2e-61 238.4 311 50.5
Zm00001eb018120 Zea mays HOM05D006579 ORTHO05D007783 2.7e-60 236.5 305 49.5
Mapoly0012s0210 Marchantia polymorpha HOM05D006579 ORTHO05D007783 7.9e-60 235.0 310 49.7
Hma1.2p1_1372F.1_g278650 Hydrangea macrophylla HOM05D006579 ORTHO05D007783 1.8e-59 233.8 211 64.9
Ah.01g015750 Amaranthus hybridus HOM05D006579 ORTHO05D007783 3.7e-57 226.1 401 43.9
Pp3c5_5390 Physcomitrium patens HOM05D006579 ORTHO05D007783 1.4e-56 224.2 314 48.1
AagrBONN_evm.TU.Sc2ySwM_117.1030 Anthoceros agrestis HOM05D006579 ORTHO05D007783 4.5e-55 219.2 308 48.1
CSS0018503 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 2.9e-54 216.5 204 61.8
Rhsim01G0001200 Rhododendron simsii HOM05D006579 ORTHO05D007783 3.9e-51 206.1 204 60.8
SHI19775 Sapria himalayana HOM05D006579 ORTHO05D007783 6.3e-49 198.7 316 45.6
vmacro02350 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 3.8e-46 189.5 140 73.6
Lju2566A1G36 Lonicera japonica HOM05D006579 ORTHO05D007783 2.3e-43 180.3 144 68.1
CBR_g3462 Chara braunii HOM05D006579 ORTHO05D007783 1.6e-39 167.5 224 46.9
SEGI_25815 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 2.5e-37 160.2 134 64.2
HPP92_013492 Vanilla planifolia HOM05D006579 ORTHO05D007783 2.8e-33 146.7 197 51.3
HanXRQChr09g0263751 Helianthus annuus HOM05D006579 ORTHO05D007783 3.7e-33 146.4 211 46.9
Cc00_g21250 Coffea canephora HOM05D006579 ORTHO05D007783 1.2e-26 124.8 86 70.9
Haze_05169 Corylus avellana HOM05D006579 ORTHO05D007783 1.4e-24 117.9 155 49.7
AUR62039016 Chenopodium quinoa HOM05D006579 ORTHO05D007783 1.8e-24 117.5 133 53.4
SMO367G0899 Selaginella moellendorffii HOM05D006579 ORTHO05D007783 1.0e-22 111.7 174 44.3
vmacro02349 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 6.1e-20 102.4 112 58.0
Rhsim01G0001100 Rhododendron simsii HOM05D006579 ORTHO05D007783 6.8e-19 99.0 114 58.8
COL.COLO4_00282 Corchorus olitorius HOM05D006579 ORTHO05D007783 7.5e-18 95.5 105 54.3
SEGI_10424 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 8.3e-17 92.0 136 48.5
Lju2566A1T42 Lonicera japonica HOM05D006579 ORTHO05D007783 2.2e-09 67.4 106 45.3
MCO04G420 Micromonas commoda HOM05D006579 ORTHO05D007783 2.4e-08 63.9 241 30.3


User provided reference genes

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