Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold4172G54434 Striga asiatica HOM05D002451 ORTHO05D007901 3.1e-136 488.4 238 100.0
SGA_v2.0_scaffold843G53664 Striga asiatica HOM05D002451 ORTHO05D007901 7.6e-135 483.8 238 99.2
MSTRG.10604 Avicennia marina HOM05D002451 ORTHO05D007901 3.3e-90 335.5 238 70.2
Dinv36690 Davidia involucrata HOM05D002451 ORTHO05D007901 2.0e-82 309.7 240 66.2
Actinidia32654 Actinidia chinensis HOM05D002451 ORTHO05D007901 3.7e-81 305.4 241 62.2
CSS0003026 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D007901 4.1e-80 302.0 240 61.2
Cfa003184 Carpinus fangiana HOM05D002451 ORTHO05D007901 2.7e-79 299.3 238 63.4
Migut.K00538 Erythranthe guttata HOM05D002451 ORTHO05D007901 7.7e-79 297.7 209 70.8
Oeu053181.2 Olea europaea HOM05D002451 ORTHO05D007901 1.5e-77 293.5 238 63.0
CiPaw.03G225500 Carya illinoinensis HOM05D002451 ORTHO05D007901 3.2e-77 292.4 238 60.1
Hma1.2p1_0571F.1_g180680 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 4.2e-77 292.0 240 62.5
Hma1.2p1_0571F.1_g180690 Hydrangea macrophylla HOM05D002451 ORTHO05D007901 4.2e-77 292.0 240 62.5
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 9.4e-77 290.8 240 58.8
Thecc.09G101000 Theobroma cacao HOM05D002451 ORTHO05D007901 1.2e-76 290.4 236 59.7
Gorai.009G027400 Gossypium raimondii HOM05D002451 ORTHO05D007901 2.7e-76 289.3 236 60.2
Gohir.A05G025800 Gossypium hirsutum HOM05D002451 ORTHO05D007901 3.6e-76 288.9 236 60.6
Atru.chr7.1460 Acer truncatum HOM05D002451 ORTHO05D007901 4.7e-76 288.5 237 60.8
Nitab4.5_0005668g0020 Nicotiana tabacum HOM05D002451 ORTHO05D007901 4.7e-76 288.5 238 58.4
GSVIVG01015305001 Vitis vinifera HOM05D002451 ORTHO05D007901 4.7e-76 288.5 238 61.3
ClCG11G002150 Citrullus lanatus HOM05D002451 ORTHO05D007901 2.3e-75 286.2 239 59.8
TWI34G1500 Tripterygium wilfordii HOM05D002451 ORTHO05D007901 3.0e-75 285.8 237 59.5
vmacro06250 Vaccinium macrocarpon HOM05D002451 ORTHO05D007901 5.2e-75 285.0 241 59.3
Duzib168G1562 Durio zibethinus HOM05D002451 ORTHO05D007901 1.2e-74 283.9 236 60.6
MD02G1065300 Malus domestica HOM05D002451 ORTHO05D007901 2.0e-74 283.1 240 61.2
Nn8g39075 Nelumbo nucifera HOM05D002451 ORTHO05D007901 2.0e-74 283.1 251 55.8
Lalb_Chr05g0223211 Lupinus albus HOM05D002451 ORTHO05D007901 5.7e-74 281.6 238 58.8
VMungo0251G0535 Vigna mungo HOM05D002451 ORTHO05D007901 7.5e-74 281.2 238 59.7
Manes.16G108300 Manihot esculenta HOM05D002451 ORTHO05D007901 9.8e-74 280.8 242 56.6
Phvul.002G309000 Phaseolus vulgaris HOM05D002451 ORTHO05D007901 9.8e-74 280.8 238 59.2
Rhsim03G0237000 Rhododendron simsii HOM05D002451 ORTHO05D007901 1.3e-73 280.4 244 57.0
Lj7A665T28 Lonicera japonica HOM05D002451 ORTHO05D007901 8.3e-73 277.7 241 59.3
MBI04_g20306_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D007901 1.8e-72 276.6 239 57.3
CANSAT56G2212 Cannabis sativa HOM05D002451 ORTHO05D007901 4.1e-72 275.4 240 58.3
MELO3C004587.2 Cucumis melo HOM05D002451 ORTHO05D007901 7.0e-72 274.6 239 58.2
CsaV3_2G001930 Cucumis sativus L. HOM05D002451 ORTHO05D007901 9.1e-72 274.2 240 59.2
Prupe.7G220200 Prunus persica HOM05D002451 ORTHO05D007901 9.1e-72 274.2 241 59.8
DCAR_012039 Daucus carota HOM05D002451 ORTHO05D007901 1.2e-71 273.9 240 59.6
Eucgr.C00999 Eucalyptus grandis HOM05D002451 ORTHO05D007901 1.6e-71 273.5 240 57.5
PSO063G0860 Papaver somniferum HOM05D002451 ORTHO05D007901 2.7e-71 272.7 237 58.2
SalBow1G3696 Salvia bowleyana HOM05D002451 ORTHO05D007901 2.7e-71 272.7 238 61.8
EL10Ac8g18383 Beta vulgaris HOM05D002451 ORTHO05D007901 4.5e-71 271.9 246 55.7
Lj4g0024953 Lotus japonicus HOM05D002451 ORTHO05D007901 7.7e-71 271.2 238 58.0
Cc06_g10440 Coffea canephora HOM05D002451 ORTHO05D007901 1.0e-70 270.8 243 56.4
Ca_17363_v3 Cicer arietinum L. HOM05D002451 ORTHO05D007901 2.9e-70 269.2 238 58.4
SalBow1G8658 Salvia bowleyana HOM05D002451 ORTHO05D007901 2.9e-70 269.2 238 61.3
Solyc12g008450.2 Solanum lycopersicum HOM05D002451 ORTHO05D007901 6.6e-70 268.1 238 56.7
PGSC0003DMG400000298 Solanum tuberosum HOM05D002451 ORTHO05D007901 8.6e-70 267.7 240 57.9
Glyma.05G227000 Glycine max HOM05D002451 ORTHO05D007901 1.1e-69 267.3 242 57.4
Sopen12g003400 Solanum pennellii HOM05D002451 ORTHO05D007901 1.1e-69 267.3 238 56.7
Sed0018496 Sechium edule HOM05D002451 ORTHO05D007901 1.5e-69 266.9 237 56.1
Aqoxy7G01412 Aquilegia oxysepala HOM05D002451 ORTHO05D007901 1.9e-69 266.5 240 54.6
Psat7g017040 Pisum sativum HOM05D002451 ORTHO05D007901 2.5e-69 266.2 242 57.9
Lsat_1_v5_gn_7_39761 Lactuca sativa HOM05D002451 ORTHO05D007901 3.3e-69 265.8 238 56.7
Potri.018G087300 Populus trichocarpa HOM05D002451 ORTHO05D007901 5.5e-69 265.0 238 56.3
FAN23G2627 Fragaria x ananassa HOM05D002451 ORTHO05D007901 9.5e-69 264.2 245 57.1
FvH4_1g06070 Fragaria vesca HOM05D002451 ORTHO05D007901 1.6e-68 263.5 244 56.1
Sc08g0008000 Simmondsia chinensis HOM05D002451 ORTHO05D007901 1.6e-68 263.5 238 56.3
arahy.Tifrunner.gnm1.ann1.GUCG30 Arachis hypogaea HOM05D002451 ORTHO05D007901 2.1e-68 263.1 243 56.8
FAN28G1338 Fragaria x ananassa HOM05D002451 ORTHO05D007901 2.1e-68 263.1 246 56.5
RcHm_v2.0_Chr2g0091831 Rosa chinensis HOM05D002451 ORTHO05D007901 2.8e-68 262.7 245 55.9
TPR.G23434 Trifolium pratense HOM05D002451 ORTHO05D007901 2.8e-68 262.7 240 57.9
FAN26G3439 Fragaria x ananassa HOM05D002451 ORTHO05D007901 3.6e-68 262.3 244 55.7
Medtr8g102540 Medicago truncatula HOM05D002451 ORTHO05D007901 8.0e-68 261.2 240 57.5
FAN26G0432 Fragaria x ananassa HOM05D002451 ORTHO05D007901 1.8e-67 260.0 244 55.3
AL4G38420 Arabidopsis lyrata HOM05D002451 ORTHO05D007901 4.0e-67 258.8 236 55.5
PGR142G3373 Punica granatum HOM05D002451 ORTHO05D007901 8.9e-67 257.7 238 54.6
AT2G40570 Arabidopsis thaliana HOM05D002451 ORTHO05D007901 1.2e-66 257.3 238 55.0
Ah.14g083250 Amaranthus hybridus HOM05D002451 ORTHO05D007901 9.8e-66 254.2 236 55.9
AUR62010914 Chenopodium quinoa HOM05D002451 ORTHO05D007901 9.8e-66 254.2 241 54.8
Sabra18G0075400 Salix brachista HOM05D002451 ORTHO05D007901 3.1e-64 249.2 277 50.2
Sp4g22900 Schrenkiella parvula HOM05D002451 ORTHO05D007901 4.1e-64 248.8 239 53.1
Aa31LG3G1530 Aethionema arabicum HOM05D002451 ORTHO05D007901 2.7e-63 246.1 239 51.5
Thhalv10016464m.g Eutrema salsugineum HOM05D002451 ORTHO05D007901 4.5e-63 245.4 240 54.2
HPP92_009804 Vanilla planifolia HOM05D002451 ORTHO05D007901 5.9e-63 245.0 244 52.0
A04p31020 Brassica napus HOM05D002451 ORTHO05D007901 3.8e-62 242.3 243 50.2
THA.LOC104807537 Tarenaya hassleriana HOM05D002451 ORTHO05D007901 3.8e-62 242.3 240 52.1
ATR0705G045 Amborella trichopoda HOM05D002451 ORTHO05D007901 6.6e-62 241.5 255 50.6
Carub.0004s2284 Capsella rubella HOM05D002451 ORTHO05D007901 6.6e-62 241.5 251 53.4
BraA04t18559Z Brassica rapa HOM05D002451 ORTHO05D007901 8.6e-62 241.1 243 50.2
Gohir.D05G027300 Gossypium hirsutum HOM05D002451 ORTHO05D007901 8.6e-62 241.1 202 57.9
BcaC02g07322 Brassica carinata HOM05D002451 ORTHO05D007901 1.5e-61 240.4 243 50.6
TAR636G1745 Trochodendron aralioides HOM05D002451 ORTHO05D007901 1.5e-61 240.4 256 49.6
CARHR135670 Cardamine hirsuta HOM05D002451 ORTHO05D007901 1.9e-61 240.0 237 52.7
Os06g0555500 Oryza sativa ssp. japonica HOM05D002451 ORTHO05D007901 2.5e-61 239.6 247 51.4
AUR62021412 Chenopodium quinoa HOM05D002451 ORTHO05D007901 3.3e-61 239.2 236 52.5
COL.COLO4_34751 Corchorus olitorius HOM05D002451 ORTHO05D007901 4.3e-61 238.8 212 57.1
BcaB06g29152 Brassica carinata HOM05D002451 ORTHO05D007901 1.6e-60 236.9 240 51.7
BolC4t28342H Brassica oleracea HOM05D002451 ORTHO05D007901 1.6e-60 236.9 243 49.0
C04p68410 Brassica napus HOM05D002451 ORTHO05D007901 1.0e-59 234.2 241 49.4
CDE08G0666 Ceratophyllum demersum HOM05D002257 ORTHO05D007901 1.4e-56 223.8 240 50.0
CAN.G1642.1 Capsicum annuum HOM05D002451 ORTHO05D007901 2.4e-56 223.0 203 55.2
Ciclev10008594m.g Citrus clementina HOM05D002451 ORTHO05D007901 1.2e-55 220.7 163 65.6
Zm00001eb384640 Zea mays HOM05D002451 ORTHO05D007901 2.7e-55 219.5 244 48.8
SHI02693 Sapria himalayana HOM05D002451 ORTHO05D007901 3.5e-55 219.2 244 45.9
CAN.G1241.33 Capsicum annuum HOM05D002451 ORTHO05D007901 1.5e-53 213.8 162 62.3
FAN19G3003 Fragaria x ananassa HOM05D002451 ORTHO05D007901 1.5e-53 213.8 216 52.3
Peaxi162Scf00665g00035 Petunia axillaris HOM05D002451 ORTHO05D007901 5.6e-53 211.8 170 60.0
Hund09106 Selenicereus undatus HOM05D002451 ORTHO05D007901 2.0e-50 203.4 227 48.0
SEGI_00986 Sequoiadendron giganteum HOM05D002451 ORTHO05D007901 5.8e-50 201.8 259 44.4
Mapoly0002s0306 Marchantia polymorpha HOM05D002451 ORTHO05D007901 1.1e-48 197.6 263 44.9
HanXRQChr09g0238871 Helianthus annuus HOM05D002451 ORTHO05D007901 7.0e-48 194.9 158 60.8
unitig_46.g18399 Utricularia gibba HOM05D002451 ORTHO05D007901 2.1e-47 193.4 206 50.0
SpUn0061_0010 Schrenkiella parvula HOM05D002451 ORTHO05D007901 2.1e-44 183.3 128 65.6
Pp3c1_19270 Physcomitrium patens HOM05D002451 ORTHO05D007901 5.8e-42 175.3 296 36.1
AagrBONN_evm.TU.Sc2ySwM_117.4166 Anthoceros agrestis HOM05D002451 ORTHO05D007901 4.1e-40 169.1 238 42.4
SMO118G0195 Selaginella moellendorffii HOM05D002451 ORTHO05D007901 7.3e-37 158.3 253 37.9
Cpa.g.c44357 Carica papaya HOM05D002451 ORTHO05D007901 4.7e-36 155.6 141 56.7
CDE02G1621 Ceratophyllum demersum HOM05D002451 ORTHO05D007901 3.1e-27 126.3 96 61.5
CBR_g41536 Chara braunii HOM05D002451 ORTHO05D007901 2.7e-23 113.2 119 52.1
ECA240G2417 Erigeron canadensis HOM05D002451 ORTHO05D007901 1.9e-21 107.1 154 40.9
MD15G1196200 Malus domestica HOM05D002451 ORTHO05D007901 1.3e-17 94.4 183 35.0
CAN.G4309.1 Capsicum annuum HOM05D002451 ORTHO05D007901 1.3e-12 77.8 77 49.4
MCO03G573 Micromonas commoda HOM05D002451 ORTHO05D007901 1.4e-08 64.3 94 34.0
Cre06.g272100 Chlamydomonas reinhardtii HOM05D002451 ORTHO05D007901 1.9e-08 63.9 62 41.9
SGA_v2.0_scaffold19G08736 Striga asiatica HOM05D002451 ORTHO05D007901 1.9e-08 63.9 51 56.9


User provided reference genes

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