Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold416G51227 Striga asiatica HOM05D020453 ORTHO05D026191 5.1e-54 214.2 109 100.0
SGA_v2.0_scaffold117G32387 Striga asiatica HOM05D000096 ORTHO05D000045 4.9e-20 101.3 106 60.4
C05p27580 Brassica napus HOM05D000096 ORTHO05D000045 5.8e-13 77.8 134 37.3
BolC5t31478H Brassica oleracea HOM05D000096 ORTHO05D000045 5.8e-13 77.8 134 37.3
C04p08630 Brassica napus HOM05D000096 ORTHO05D000045 2.2e-12 75.9 104 42.3
QL11p040805 Quercus lobata HOM05D000096 ORTHO05D000045 4.1e-11 71.6 136 34.6
C07p39820 Brassica napus HOM05D000096 ORTHO05D000045 9.2e-11 70.5 136 31.6
QL07p007200 Quercus lobata HOM05D000096 ORTHO05D000045 9.2e-11 70.5 136 33.8
C05p29460 Brassica napus HOM05D000096 ORTHO05D000045 2.0e-10 69.3 136 32.4
ECA233G5106 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.0e-10 69.3 137 33.6
LjContig00094g0010721 Lotus japonicus HOM05D000096 ORTHO05D000045 3.5e-10 68.6 107 37.4
LjContig00096g0004252 Lotus japonicus HOM05D000096 ORTHO05D000045 3.5e-10 68.6 107 37.4
TPR.G40139 Trifolium pratense HOM05D000096 ORTHO05D000045 1.0e-09 67.0 136 28.7
C07p10870 Brassica napus HOM05D000096 ORTHO05D000045 1.3e-09 66.6 134 33.6
HanXRQChr11g0340091 Helianthus annuus HOM05D000096 ORTHO05D000045 1.7e-09 66.2 129 32.6
C07p10850 Brassica napus HOM05D000096 ORTHO05D000045 2.3e-09 65.9 134 33.6
Lj3g0024542 Lotus japonicus HOM05D000096 ORTHO05D000045 2.3e-09 65.9 129 32.6
TPR.G27218 Trifolium pratense HOM05D000096 ORTHO05D000045 2.3e-09 65.9 121 32.2
QL12p005470 Quercus lobata HOM05D000096 ORTHO05D000045 3.0e-09 65.5 136 30.1
ECA247G2253 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.6e-09 64.3 136 30.9
AUR62003917 Chenopodium quinoa HOM05D000096 ORTHO05D000045 8.6e-09 63.9 136 30.1
ECA236G0125 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.1e-08 63.5 136 30.9
ECA246G0109 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.1e-08 63.5 136 33.8
SGA_v2.0_scaffold393G50714 Striga asiatica HOM05D020453 ORTHO05D026191 1.1e-08 63.5 40 77.5
C05p39990 Brassica napus HOM05D000096 ORTHO05D000045 1.5e-08 63.2 136 33.8
TPR.G13837 Trifolium pratense HOM05D000096 ORTHO05D000045 1.5e-08 63.2 134 29.1
C01p14560 Brassica napus HOM05D000096 ORTHO05D000045 1.9e-08 62.8 131 32.8
C02p01010 Brassica napus HOM05D000096 ORTHO05D000045 1.9e-08 62.8 136 31.6
C04p45560 Brassica napus HOM05D000096 ORTHO05D000045 1.9e-08 62.8 136 31.6
ECA232G4551 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.9e-08 62.8 136 30.1
A03p66090 Brassica napus HOM05D000096 ORTHO05D000045 2.5e-08 62.4 118 36.4
C02p27660 Brassica napus HOM05D000096 ORTHO05D000045 2.5e-08 62.4 136 33.1
Hund04350 Selenicereus undatus HOM05D000096 ORTHO05D003441 2.5e-08 62.4 136 30.9
Hund25793 Selenicereus undatus HOM05D000096 ORTHO05D003441 2.5e-08 62.4 134 31.3
Hund28482 Selenicereus undatus HOM05D000096 ORTHO05D003441 2.5e-08 62.4 134 30.6
TPR.G9630 Trifolium pratense HOM05D000096 ORTHO05D000045 2.5e-08 62.4 136 30.9
C05p35860 Brassica napus HOM05D000096 ORTHO05D000045 3.3e-08 62.0 136 33.1
Lj2g0000565 Lotus japonicus HOM05D000096 ORTHO05D000045 3.3e-08 62.0 113 32.7
Hund10101 Selenicereus undatus HOM05D000096 ORTHO05D003441 3.3e-08 62.0 134 31.3
C05p58280 Brassica napus HOM05D000096 ORTHO05D000045 4.3e-08 61.6 136 33.1
ECA248G1927 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.6e-08 61.2 107 35.5
Lj3g0022394 Lotus japonicus HOM05D000096 ORTHO05D000045 7.3e-08 60.8 119 29.4
A02p28690 Brassica napus HOM05D000096 ORTHO05D000045 9.5e-08 60.5 136 34.6
C07p14850 Brassica napus HOM05D000096 ORTHO05D000045 1.2e-07 60.1 142 31.7
C09p22440 Brassica napus HOM05D000096 ORTHO05D000045 1.2e-07 60.1 136 33.1
Lj3g0000363 Lotus japonicus HOM05D000096 ORTHO05D000045 1.2e-07 60.1 126 33.3
TWI31G0491 Tripterygium wilfordii HOM05D000096 ORTHO05D000045 1.2e-07 60.1 136 28.7
Hund09987 Selenicereus undatus HOM05D000096 ORTHO05D003441 1.6e-07 59.7 134 30.6
Hund14972 Selenicereus undatus HOM05D000096 ORTHO05D003441 1.6e-07 59.7 129 31.8
TWI81G0364 Tripterygium wilfordii HOM05D000096 ORTHO05D000045 1.6e-07 59.7 120 31.7
C03p63030 Brassica napus HOM05D000096 ORTHO05D000045 2.1e-07 59.3 120 33.3
BolC9t54833H Brassica oleracea HOM05D000096 ORTHO05D000045 2.1e-07 59.3 121 33.1
CANSAT01G0186 Cannabis sativa HOM05D000096 ORTHO05D000045 2.8e-07 58.9 136 29.4
TWI77G0609 Tripterygium wilfordii HOM05D000096 ORTHO05D000045 2.8e-07 58.9 136 29.4
Ciclev10003171m.g Citrus clementina HOM05D000096 ORTHO05D000045 3.6e-07 58.5 119 31.1
ECA236G4162 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.6e-07 58.5 107 33.6
ECA238G0298 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.6e-07 58.5 133 32.3
ECA246G2685 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.6e-07 58.5 136 27.2
Glyma.20G059700 Glycine max HOM05D000096 ORTHO05D000045 3.6e-07 58.5 137 30.7
A03p68700 Brassica napus HOM05D000096 ORTHO05D000045 4.7e-07 58.2 119 31.1
ECA236G3032 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.7e-07 58.2 119 31.1
Sopen01g012730 Solanum pennellii HOM05D000096 ORTHO05D000045 4.7e-07 58.2 136 28.7
ECA238G1208 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.2e-07 57.8 107 29.9
Sopen09g023800 Solanum pennellii HOM05D000096 ORTHO05D000045 6.2e-07 57.8 136 28.7
Sopen11g021980 Solanum pennellii HOM05D000096 ORTHO05D000045 6.2e-07 57.8 136 28.7
AUR62038719 Chenopodium quinoa HOM05D000096 ORTHO05D000045 8.0e-07 57.4 136 29.4
Hma1.2p1_0877F.1_g231645 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 8.0e-07 57.4 136 28.7
BolC3t17976H Brassica oleracea HOM05D000096 ORTHO05D000045 1.1e-06 57.0 64 46.9
ECA234G1666 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.1e-06 57.0 132 28.8
AUR62034350 Chenopodium quinoa HOM05D000096 ORTHO05D000045 1.4e-06 56.6 136 28.7
Hund04420 Selenicereus undatus HOM05D000096 ORTHO05D003441 1.4e-06 56.6 122 31.1
TPR.G34836 Trifolium pratense HOM05D000096 ORTHO05D000045 1.4e-06 56.6 132 29.5
RcHm_v2.0_Chr5g0006651 Rosa chinensis HOM05D000096 ORTHO05D000045 2.3e-06 55.8 136 27.9
ECA247G1956 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.1e-06 55.5 107 29.0
Nn1g09339 Nelumbo nucifera HOM05D000096 ORTHO05D000045 3.1e-06 55.5 124 27.4
AUR62040088 Chenopodium quinoa HOM05D000096 ORTHO05D000045 4.0e-06 55.1 136 28.7
Hund13528 Selenicereus undatus HOM05D000096 ORTHO05D003441 4.0e-06 55.1 122 28.7
TPR.G15077 Trifolium pratense HOM05D000096 ORTHO05D000045 4.0e-06 55.1 113 29.2
Ciclev10004019m.g Citrus clementina HOM05D000096 ORTHO05D000045 5.2e-06 54.7 136 27.9
ECA247G2045 Erigeron canadensis HOM05D000096 ORTHO05D000045 5.2e-06 54.7 80 37.5
ECA232G2807 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.8e-06 54.3 134 25.4
QL09p000096 Quercus lobata HOM05D000096 ORTHO05D000045 6.8e-06 54.3 136 30.9
SGA_v2.0_scaffold49G18201 Striga asiatica HOM05D000096 ORTHO05D026191 6.8e-06 54.3 53 47.2
A03p36950 Brassica napus HOM05D000096 ORTHO05D000045 8.9e-06 53.9 134 25.4
BraA03t12857Z Brassica rapa HOM05D000096 ORTHO05D000045 8.9e-06 53.9 134 25.4
ECA236G4768 Erigeron canadensis HOM05D000096 ORTHO05D000045 8.9e-06 53.9 118 26.3
Hund10122 Selenicereus undatus HOM05D000096 ORTHO05D003441 8.9e-06 53.9 133 29.3
Hund30369 Selenicereus undatus HOM05D000096 ORTHO05D003441 8.9e-06 53.9 122 28.7
TPR.G22137 Trifolium pratense HOM05D000096 ORTHO05D000045 8.9e-06 53.9 134 28.4
TPR.G26472 Trifolium pratense HOM05D000096 ORTHO05D000045 8.9e-06 53.9 145 27.6
TPR.G5052 Trifolium pratense HOM05D000096 ORTHO05D000045 8.9e-06 53.9 136 27.9


User provided reference genes

Program Settings